BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3117.p (346 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775873.1| hypothetical protein Hsero_2466 [Herbaspiril... 578 e-163 ref|YP_003750019.1| hypothetical protein RPSI07_mp1063 [Ralstoni... 385 e-105 emb|CCA83510.1| conserved hypothethical protein, UCP012641 [bloo... 384 e-105 ref|NP_522593.1| hypothetical protein RS02369 [Ralstonia solanac... 381 e-104 emb|CAQ36911.1| protein of unknown function ucp012641 [Ralstonia... 380 e-103 >ref|YP_003775873.1| hypothetical protein Hsero_2466 [Herbaspirillum seropedicae SmR1] gb|ADJ63965.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 370 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 278/310 (89%), Positives = 292/310 (94%) Query: 35 GPGRWRSVRPQNEGVVFKQCVNYWRENICNWMLDEREPHELCASCRLTRVIPNLDEGNNR 94 GPGRWRSVRP+NEG VFKQC+NYWRENICNWMLDE+E HELCASCRLTRVIP LDEGNNR Sbjct: 54 GPGRWRSVRPENEGRVFKQCLNYWRENICNWMLDEQETHELCASCRLTRVIPTLDEGNNR 113 Query: 95 VLWSRLETAKRRLLHSLWTLQLQPVPKMEDEEAGLAFEFLQDLPHGERVLTGHADGVITI 154 VLWSRLETAKRRLLH+LWTL+LQP PKMEDE++GLAFEFLQD PHGERVLTGHADGVITI Sbjct: 114 VLWSRLETAKRRLLHTLWTLRLQPAPKMEDEQSGLAFEFLQDQPHGERVLTGHADGVITI 173 Query: 155 NIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAPTNWITPFREMFGDERQD 214 NIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVA + W+ PFR+ FGDER+D Sbjct: 174 NIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAGSAWLEPFRQRFGDERED 233 Query: 215 YGEALKAHYENGPRPDWEENFVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLRP 274 YG AL+ HYENGPR DWEE FVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLRP Sbjct: 234 YGAALQKHYENGPRADWEEQFVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLRP 293 Query: 275 RHEGEQKLVIKAPPVAAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVLQKLR 334 RH GEQKLVI APP AAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVL KLR Sbjct: 294 RHAGEQKLVIPAPPTAAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVLGKLR 353 Query: 335 FVHEVVNGGA 344 FVHE+V+G A Sbjct: 354 FVHELVSGAA 363 >ref|YP_003750019.1| hypothetical protein RPSI07_mp1063 [Ralstonia solanacearum PSI07] emb|CBJ35394.1| conserved hypothethical protein, UCP012641 [Ralstonia solanacearum PSI07] Length = 355 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 186/311 (59%), Positives = 223/311 (71%), Gaps = 1/311 (0%) Query: 34 AGPGRWRSVRPQNEGVVFKQCVNYWRENICNWMLDEREPHELCASCRLTRVIPNLDEGNN 93 AG GRWRS+ PQ G +++QC NY ENICNWM+ P LC +C+ T IPNL +N Sbjct: 42 AGEGRWRSLHPQAGGALYRQCHNYAVENICNWMVPADAPDTLCRACQFTGTIPNLSTPDN 101 Query: 94 RVLWSRLETAKRRLLHSLWTLQLQPVPKMEDEEAGLAFEFLQDLPHGERVLTGHADGVIT 153 R W RLETAKRRLL++L L L + E E GLAF FL+ P GE V+TGH GVIT Sbjct: 102 RFYWYRLETAKRRLLYTLTALGLPLHTRCEQPETGLAFAFLETTPEGEAVMTGHDRGVIT 161 Query: 154 INIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAPTNWITPFREMFGDERQ 213 +NIAEAD A RE+AR + EPYRTLLGHFRHE+GHY+FDRL+A T W+ FR+ FGDE+ Sbjct: 162 LNIAEADDAARERARTSLGEPYRTLLGHFRHETGHYFFDRLIAGTRWLPLFRQRFGDEQA 221 Query: 214 DYGEALKAHYENGPRPDWEENFVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLR 273 DY AL+A+Y+NGP DW + +SAYA+ HPWEDWAETWAHYLHM DTL+TA +CG+ L Sbjct: 222 DYAAALRAYYDNGPPADWPQTHISAYATMHPWEDWAETWAHYLHMVDTLDTAVSCGLVLL 281 Query: 274 PRHEGEQKLVIKAPPVAAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVLQKL 333 P H E L + P AG FD L + WF LTY LNSLNRS+GMPD YPFTL+TPV+ KL Sbjct: 282 PDHPQEPALTDQTPVEEAG-FDSLMQRWFPLTYALNSLNRSLGMPDGYPFTLATPVIDKL 340 Query: 334 RFVHEVVNGGA 344 RFVH V+ A Sbjct: 341 RFVHRVIAASA 351 >emb|CCA83510.1| conserved hypothethical protein, UCP012641 [blood disease bacterium R229] Length = 355 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 186/311 (59%), Positives = 223/311 (71%), Gaps = 1/311 (0%) Query: 34 AGPGRWRSVRPQNEGVVFKQCVNYWRENICNWMLDEREPHELCASCRLTRVIPNLDEGNN 93 AG GRWRS+ PQ G +++QC NY ENICNWM+ P LC +C+ T IPNL +N Sbjct: 42 AGEGRWRSLHPQAGGALYRQCHNYAVENICNWMVPADAPDTLCRACQFTGTIPNLSTPDN 101 Query: 94 RVLWSRLETAKRRLLHSLWTLQLQPVPKMEDEEAGLAFEFLQDLPHGERVLTGHADGVIT 153 R W RLETAKRRLL++L L L + E E GLAF FL+ P GE V+TGH GVIT Sbjct: 102 RFYWYRLETAKRRLLYTLTALGLPLHTRREQPETGLAFAFLETTPEGEAVMTGHDRGVIT 161 Query: 154 INIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAPTNWITPFREMFGDERQ 213 +NIAEAD A RE+AR + EPYRTLLGHFRHE+GHY+FDRL+A T W+ FR+ FGDE+ Sbjct: 162 LNIAEADDAARERARTSLGEPYRTLLGHFRHETGHYFFDRLIASTRWLPLFRQRFGDEQA 221 Query: 214 DYGEALKAHYENGPRPDWEENFVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLR 273 DY AL+A+Y+NGP DW + +SAYA+ HPWEDWAETWAHYLHM DTL+TA +CG+ L Sbjct: 222 DYAAALRAYYDNGPPADWPQTHISAYATMHPWEDWAETWAHYLHMVDTLDTAVSCGLVLL 281 Query: 274 PRHEGEQKLVIKAPPVAAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVLQKL 333 P H E L + P AG FD L + WF LTY LNSLNRS+GMPD YPFTL+TPV+ KL Sbjct: 282 PDHPQEPALTDQTPVEEAG-FDSLMQRWFPLTYALNSLNRSLGMPDGYPFTLATPVIDKL 340 Query: 334 RFVHEVVNGGA 344 RFVH V+ A Sbjct: 341 RFVHRVIAASA 351 >ref|NP_522593.1| hypothetical protein RS02369 [Ralstonia solanacearum GMI1000] emb|CAD18183.1| hypothetical protein of unknown function ucp012641 [Ralstonia solanacearum GMI1000] Length = 355 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 186/311 (59%), Positives = 222/311 (71%), Gaps = 1/311 (0%) Query: 34 AGPGRWRSVRPQNEGVVFKQCVNYWRENICNWMLDEREPHELCASCRLTRVIPNLDEGNN 93 AG GRWRS+ P+ G +++QC NY ENICN M+ P LC +C+ T IPNL +N Sbjct: 42 AGEGRWRSLHPRAGGALYRQCHNYAVENICNGMVRADAPDTLCRACQFTATIPNLRVPDN 101 Query: 94 RVLWSRLETAKRRLLHSLWTLQLQPVPKMEDEEAGLAFEFLQDLPHGERVLTGHADGVIT 153 R W RLETAKRRLL++L L L + E E GLAF FL+ P GE V+TGH G+IT Sbjct: 102 RFYWYRLETAKRRLLYTLTALGLPLRTRREQPETGLAFAFLEATPQGEAVMTGHDRGIIT 161 Query: 154 INIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAPTNWITPFREMFGDERQ 213 +NIAEAD A REQAR + EPYRTLLGHFRHE+GHY+FDRL+A T W+ FR FGDER Sbjct: 162 LNIAEADDAAREQARTALGEPYRTLLGHFRHETGHYFFDRLIAGTRWLPLFRRRFGDERA 221 Query: 214 DYGEALKAHYENGPRPDWEENFVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLR 273 DY AL+ +Y +GP DW + +SAYA+ HPWEDWAETWAHYLHM DTL+TA +CG+ LR Sbjct: 222 DYAAALRTYYGSGPPADWPQTHISAYATMHPWEDWAETWAHYLHMVDTLDTAVSCGLVLR 281 Query: 274 PRHEGEQKLVIKAPPVAAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVLQKL 333 P H E L + P AAG FD L + WF LTYVLNSLNRS+GMPD YPFTL+TPV+ KL Sbjct: 282 PDHPQEPALTDQTPVEAAG-FDSLMQRWFPLTYVLNSLNRSLGMPDGYPFTLATPVIDKL 340 Query: 334 RFVHEVVNGGA 344 RFVH V+ A Sbjct: 341 RFVHRVIAASA 351 >emb|CAQ36911.1| protein of unknown function ucp012641 [Ralstonia solanacearum MolK2] Length = 378 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 184/311 (59%), Positives = 222/311 (71%), Gaps = 1/311 (0%) Query: 34 AGPGRWRSVRPQNEGVVFKQCVNYWRENICNWMLDEREPHELCASCRLTRVIPNLDEGNN 93 AG GRWRS+ P+ G + +QC NY EN+CNWM+ + P LC +C+ T IPNL +N Sbjct: 65 AGDGRWRSLHPRAGGTLHRQCHNYAVENVCNWMVPDDAPDTLCRACQFTGTIPNLSAPDN 124 Query: 94 RVLWSRLETAKRRLLHSLWTLQLQPVPKMEDEEAGLAFEFLQDLPHGERVLTGHADGVIT 153 R W RLETAKRRLL++L L L + E GL+FEFL+ P GE V+TGH GVIT Sbjct: 125 RFYWYRLETAKRRLLYTLTALGLPLHTRREQPGTGLSFEFLESAPEGEAVMTGHDRGVIT 184 Query: 154 INIAEADPAYREQAREQMAEPYRTLLGHFRHESGHYYFDRLVAPTNWITPFREMFGDERQ 213 +NIAEAD A RE+AR + EPYRTLLGHFRHE+GHY+FDRL+A T W+ FR FGDER Sbjct: 185 LNIAEADDAARERARTALGEPYRTLLGHFRHETGHYFFDRLIAGTRWLPLFRRRFGDERA 244 Query: 214 DYGEALKAHYENGPRPDWEENFVSAYASSHPWEDWAETWAHYLHMFDTLETAYACGVQLR 273 DY AL+AHY+NGP DW + +SAYA+ HPWEDWAETWAHYLHM DTL+TA +CG+ L Sbjct: 245 DYAAALQAHYDNGPPADWAQTHISAYATMHPWEDWAETWAHYLHMVDTLDTAVSCGLVLL 304 Query: 274 PRHEGEQKLVIKAPPVAAGSFDELAREWFALTYVLNSLNRSIGMPDSYPFTLSTPVLQKL 333 P H E L + P AG FD L + WF LTYVLNSLNRS+G+ D YPFTL+TPV+ KL Sbjct: 305 PDHPQEPALTDQTPVEEAG-FDSLMQRWFPLTYVLNSLNRSLGLADGYPFTLATPVIDKL 363 Query: 334 RFVHEVVNGGA 344 RFVH V+ A Sbjct: 364 RFVHRVIAASA 374