BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3111.p         (183 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775619.1| cytosine/adenosine deaminases protein [Herba...   285   2e-75
ref|YP_001099680.1| tRNA-specific adenosine deaminase [Herminiim...   253   6e-66
ref|YP_001353698.1| hypothetical protein mma_2008 [Janthinobacte...   249   9e-65
ref|YP_004752030.1| tRNA-specific adenosine-34 deaminase [Collim...   242   2e-62
ref|ZP_08273230.1| tRNA-specific adenosine-34 deaminase [Oxaloba...   229   1e-58

>ref|YP_003775619.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63711.1| cytosine/adenosine deaminases protein [Herbaspirillum seropedicae
           SmR1]
          Length = 185

 Score =  285 bits (730), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 149/169 (88%), Positives = 158/169 (93%)

Query: 9   AITEADLRHMRAALDQANNAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMA 68
           A  EADL HMRAAL+QA +AWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMA
Sbjct: 13  AAGEADLLHMRAALEQARHAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMA 72

Query: 69  LRRAAEKLGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAADPKTGACGSVVNLFE 128
           LRRAAE LGNYRLPGCELYVTLEPCVMCSGAMMHARLARVV+GAADPKTGACGSV+NLFE
Sbjct: 73  LRRAAEILGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGAADPKTGACGSVLNLFE 132

Query: 129 QDKLNHHTELLGGVMAEECGQLLKEFFAMRREQVKQQRLLDAAAQGDAQ 177
           QD+LNHHT LLGGVMAEECGQLLK+FFAMRREQ+KQQRL  AA +G  +
Sbjct: 133 QDQLNHHTALLGGVMAEECGQLLKDFFAMRREQLKQQRLQAAAGEGSQE 181


>ref|YP_001099680.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans]
 emb|CAL61553.1| tRNA-specific adenosine deaminase [Herminiimonas arsenicoxydans]
          Length = 170

 Score =  253 bits (647), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 125/155 (80%), Positives = 141/155 (90%)

Query: 18  MRAALDQANNAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRRAAEKLG 77
           MR ALDQA+NAWALGEVPVGAVVVKDG VIATGFNQPIG HDPTAHAEIMALR AA  LG
Sbjct: 15  MRQALDQAHNAWALGEVPVGAVVVKDGQVIATGFNQPIGTHDPTAHAEIMALRAAATILG 74

Query: 78  NYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAADPKTGACGSVVNLFEQDKLNHHTE 137
           NYRLPGCELYVTLEPCVMCSGAMMHARLARVV+GA+DPKTGACGS+VNLFEQ++LNHHT+
Sbjct: 75  NYRLPGCELYVTLEPCVMCSGAMMHARLARVVFGASDPKTGACGSIVNLFEQNQLNHHTQ 134

Query: 138 LLGGVMAEECGQLLKEFFAMRREQVKQQRLLDAAA 172
           L GG+MA+ECG LLK+FFA RR+  +  +L D+++
Sbjct: 135 LTGGLMAQECGALLKDFFAERRKAAQAAKLDDSSS 169


>ref|YP_001353698.1| hypothetical protein mma_2008 [Janthinobacterium sp. Marseille]
 gb|ABR89895.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 159

 Score =  249 bits (637), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 122/150 (81%), Positives = 132/150 (88%)

Query: 14  DLRHMRAALDQANNAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRRAA 73
           D   MR ALDQA NAW LGEVPVGAVVVKDG VIATGFNQPIG HDPTAHAEIMALR AA
Sbjct: 3   DAIFMRQALDQARNAWTLGEVPVGAVVVKDGEVIATGFNQPIGTHDPTAHAEIMALRAAA 62

Query: 74  EKLGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAADPKTGACGSVVNLFEQDKLN 133
             LGNYRLPGCEL+VTLEPCVMCSGAMMHARLARVV+GA DPKTGACGSVVNLFEQ++LN
Sbjct: 63  SILGNYRLPGCELFVTLEPCVMCSGAMMHARLARVVFGAPDPKTGACGSVVNLFEQNQLN 122

Query: 134 HHTELLGGVMAEECGQLLKEFFAMRREQVK 163
           HHT+ +GGV+A+EC  LLK+FFA RR+  K
Sbjct: 123 HHTQFIGGVLADECSALLKDFFAERRKAAK 152


>ref|YP_004752030.1| tRNA-specific adenosine-34 deaminase [Collimonas fungivorans
           Ter331]
 gb|AEK61207.1| tRNA-specific adenosine-34 deaminase [Collimonas fungivorans
           Ter331]
          Length = 156

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 119/152 (78%), Positives = 134/152 (88%)

Query: 14  DLRHMRAALDQANNAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRRAA 73
           D  +MR A+ QA NAWALGEVPVGA++VKDG +IATGFNQPIG HDPTAHAEIMALR AA
Sbjct: 4   DAIYMRQAISQARNAWALGEVPVGALIVKDGQIIATGFNQPIGNHDPTAHAEIMALRAAA 63

Query: 74  EKLGNYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAADPKTGACGSVVNLFEQDKLN 133
             LGNYRLPGCE+YVTLEPC MC+GAMMHARLARVV+GA DPKTGACGSV+NLFEQ++LN
Sbjct: 64  AILGNYRLPGCEMYVTLEPCAMCAGAMMHARLARVVFGANDPKTGACGSVLNLFEQEQLN 123

Query: 134 HHTELLGGVMAEECGQLLKEFFAMRREQVKQQ 165
           HHTEL  GV+AEECG LLKEFFA RR+  ++Q
Sbjct: 124 HHTELTAGVLAEECGTLLKEFFAERRQAQQKQ 155


>ref|ZP_08273230.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33298.1| tRNA-specific adenosine-34 deaminase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 161

 Score =  229 bits (584), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 113/142 (79%), Positives = 125/142 (88%)

Query: 18  MRAALDQANNAWALGEVPVGAVVVKDGVVIATGFNQPIGKHDPTAHAEIMALRRAAEKLG 77
           MR A+DQA+NAWALGEVPVGAV+VKDG VIATGFNQ IG HDPTAHAEIMALR  A  LG
Sbjct: 7   MRLAMDQAHNAWALGEVPVGAVLVKDGQVIATGFNQSIGTHDPTAHAEIMALRAGASLLG 66

Query: 78  NYRLPGCELYVTLEPCVMCSGAMMHARLARVVYGAADPKTGACGSVVNLFEQDKLNHHTE 137
           NYRLPGCELYVTLEPC MC+GAMMHARLARVVYGA+DPKTG CGSV++LF Q +LNHHT 
Sbjct: 67  NYRLPGCELYVTLEPCAMCAGAMMHARLARVVYGASDPKTGCCGSVLDLFGQAQLNHHTG 126

Query: 138 LLGGVMAEECGQLLKEFFAMRR 159
           L+GGV+A+ C  LLK+FFA RR
Sbjct: 127 LVGGVLADACSALLKDFFAERR 148