BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3092.p (354 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_348274.1| hypothetical protein Pfl01_2543 [Pseudomonas fl... 271 1e-70 ref|ZP_07775664.1| hypothetical protein PFWH6_3074 [Pseudomonas ... 269 5e-70 ref|YP_004474853.1| hypothetical protein Psefu_2795 [Pseudomonas... 262 8e-68 ref|YP_002872938.1| hypothetical protein PFLU3370 [Pseudomonas f... 259 6e-67 gb|EFW80804.1| hypothetical protein PsgB076_10830 [Pseudomonas s... 256 3e-66 >ref|YP_348274.1| hypothetical protein Pfl01_2543 [Pseudomonas fluorescens Pf0-1] gb|ABA74284.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 332 Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats. Identities = 158/299 (52%), Positives = 191/299 (63%), Gaps = 2/299 (0%) Query: 44 LRQLVVAGLDRLPLPGHGETLARWQALAAVAAQDMSLAKLFEAHTDALAILAEAHVPAPP 103 LRQ+V AGLDRLPLPG G TL RWQ L+ V D+ L KL+E HTDALAI+ + P Sbjct: 24 LRQMVEAGLDRLPLPGSGRTLERWQRLSEVGGHDLGLCKLYEGHTDALAIIEQLGGSPTP 83 Query: 104 HSIWGVWCAQGRPGSLRLREQGDQVILEGEKSWCSGAAAVTHALLGHRDEQDRYWLLAIE 163 S WG+W A+ +R+ G V L G K+WCSGAA ++HALL DE DR L+A+ Sbjct: 84 GSTWGMWAAEPPQARVRVSRSGQLVRLNGRKAWCSGAAVLSHALLTAWDEDDRQQLVAVA 143 Query: 164 LSQPGVSIIEDDWAAIGMAATRTARLQLRTVTAQVIGGPGFYLDRPGFWQGGIGIAACWH 223 L QPGVS+ + W A+GMAAT + + V AQ IG PG YL RPGFW GGIGIAACW+ Sbjct: 144 LDQPGVSVTDQGWQAVGMAATGSVEVLFDEVEAQAIGEPGDYLQRPGFWHGGIGIAACWY 203 Query: 224 GAATALVSVLRQGLAYTLSADSHALARLGSALCAGHAAAACLRESAARIDAHPRANAMQD 283 GAA + LR L + HALA LG+ A HAAA LR SA ID++P NA Sbjct: 204 GAAREIGERLR--LHCARREEPHALASLGAVDSALHAAAQVLRVSALDIDSNPHTNAELL 261 Query: 284 ALRTRLTVERACLQIIEDLGAALGPHPYCGSRHSARLLADLPVWLRQSHAERDMTALAK 342 A R R VE A Q+I + G ALG P+C H ARL+ADLPV+LRQSHAERD+ AL + Sbjct: 262 ARRVRAVVEDAAEQVIRETGRALGAGPFCKDPHFARLVADLPVYLRQSHAERDLAALGR 320 >ref|ZP_07775664.1| hypothetical protein PFWH6_3074 [Pseudomonas fluorescens WH6] gb|EFQ63393.1| hypothetical protein PFWH6_3074 [Pseudomonas fluorescens WH6] Length = 342 Score = 269 bits (688), Expect = 5e-70, Method: Composition-based stats. Identities = 155/300 (51%), Positives = 196/300 (65%), Gaps = 3/300 (1%) Query: 44 LRQLVVAGLDRLPLPGHGETLARWQALAAVAAQDMSLAKLFEAHTDALAILAEAHVPAPP 103 L+ L GLD LPLPG GETLAR+ LA VA D+ L KLFE HTDALAI+AE H P PP Sbjct: 33 LKALQAEGLDHLPLPGSGETLARFSRLAQVAGHDLRLCKLFEGHTDALAIIAELHSPLPP 92 Query: 104 -HSIWGVWCAQGRPGSLRLREQGDQVILEGEKSWCSGAAAVTHALLGHRDEQDRYWLLAI 162 S WG+W A+ + ++ QG+++ + G K+WCSGAA V+H LL DEQDR L+A+ Sbjct: 93 LGSTWGMWAAEPPTAKVCVQRQGERLRVTGRKAWCSGAAVVSHGLLTAWDEQDRQQLVAV 152 Query: 163 ELSQPGVSIIEDDWAAIGMAATRTARLQLRTVTAQVIGGPGFYLDRPGFWQGGIGIAACW 222 + QPGV + ++ W+A+GMAAT + + +GGPG YL RPGFWQGGIGIAACW Sbjct: 153 PMQQPGVRVTDEGWSAVGMAATGSVEVLFDDAHGAAVGGPGAYLGRPGFWQGGIGIAACW 212 Query: 223 HGAATALVSVLRQGLAYTLSADSHALARLGSALCAGHAAAACLRESAARIDAHPRANAMQ 282 +GAA L LR+ + HALA LG+ A +AAA LR SAA ID P A+A Sbjct: 213 YGAAQRLAEALREQC--NKRPEPHALAHLGAVDSALYAAACALRHSAAHIDRAPTADARL 270 Query: 283 DALRTRLTVERACLQIIEDLGAALGPHPYCGSRHSARLLADLPVWLRQSHAERDMTALAK 342 A RTR VE Q+I +G ALG P+C RH A+L+ADLPV++RQSHAERD+ L + Sbjct: 271 LAQRTRACVEECVEQVIHHVGRALGAGPFCKDRHFAQLMADLPVYVRQSHAERDLAGLGE 330 >ref|YP_004474853.1| hypothetical protein Psefu_2795 [Pseudomonas fulva 12-X] gb|AEF22759.1| hypothetical protein Psefu_2795 [Pseudomonas fulva 12-X] Length = 344 Score = 262 bits (669), Expect = 8e-68, Method: Composition-based stats. Identities = 167/316 (52%), Positives = 200/316 (63%), Gaps = 6/316 (1%) Query: 29 HKTPHTQLPVVAARLLRQLVVAGLDRLPLPGHGETLARWQALAAVAAQDMSLAKLFEAHT 88 H PH P R L++L AGLD+LP PG G+TL RWQALA VAAQD+SL KL+E HT Sbjct: 21 HPLPHH--PEALLRSLQRLCDAGLDQLPKPGGGQTLQRWQALATVAAQDLSLCKLYEGHT 78 Query: 89 DALAILAEAHVPAPPHSIWGVWCAQGRPGSLRL-REQGD-QVILEGEKSWCSGAAAVTHA 146 DALAIL P H+ WG+W A+ + L EQ D V L G K+WCSGA ++HA Sbjct: 79 DALAILEHFGADVPAHATWGMWAAEPPQARVTLGAEQHDGNVRLHGRKAWCSGATVLSHA 138 Query: 147 LLGHRDEQDRYWLLAIELSQPGVSIIEDDWAAIGMAATRTARLQLRTVTAQVIGGPGFYL 206 LL +E+ L+A+ L QPGV + ED W A+GMAAT++ + Q++G PG YL Sbjct: 139 LLTAWNERGEQQLVAVALEQPGVRVTEDGWQAVGMAATQSVEILFDDARGQLVGPPGGYL 198 Query: 207 DRPGFWQGGIGIAACWHGAATALVSVLRQGLAYTLSADSHALARLGSALCAGHAAAACLR 266 RPGFWQGG GIAACWHGAA+ L LR+ A + HALA LG CA AAA+ LR Sbjct: 199 ARPGFWQGGAGIAACWHGAASRLGEALRRHCAE--RDEPHALAHLGQVDCALTAAASALR 256 Query: 267 ESAARIDAHPRANAMQDALRTRLTVERACLQIIEDLGAALGPHPYCGSRHSARLLADLPV 326 E AA IDA+P ANA R R VE + IE +G ALG PYC ARLLADLPV Sbjct: 257 ECAAWIDANPEANAELPVRRVRALVEHSASTAIEHVGRALGAAPYCRDGALARLLADLPV 316 Query: 327 WLRQSHAERDMTALAK 342 +LRQSHAERD+ AL K Sbjct: 317 FLRQSHAERDLAALGK 332 >ref|YP_002872938.1| hypothetical protein PFLU3370 [Pseudomonas fluorescens SBW25] emb|CAY49595.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 338 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 144/299 (48%), Positives = 197/299 (65%), Gaps = 3/299 (1%) Query: 44 LRQLVVAGLDRLPLPGHGETLARWQALAAVAAQDMSLAKLFEAHTDALAILAEAHVPAPP 103 L+ L GLD+LPLPG G+TLAR+ LA VA D+ L KLFE HTDALAI+AE + P PP Sbjct: 29 LKALQEEGLDQLPLPGSGQTLARFSRLAQVAGHDLRLCKLFEGHTDALAIIAELNSPLPP 88 Query: 104 -HSIWGVWCAQGRPGSLRLREQGDQVILEGEKSWCSGAAAVTHALLGHRDEQDRYWLLAI 162 S WG+W A+ +R+ ++G ++ ++G K+WCSGAA V+H L+ DE+DR L+AI Sbjct: 89 LGSTWGMWAAEPPTAKVRVLQEGHRLRVQGRKAWCSGAAVVSHGLMTAWDEEDRQQLVAI 148 Query: 163 ELSQPGVSIIEDDWAAIGMAATRTARLQLRTVTAQVIGGPGFYLDRPGFWQGGIGIAACW 222 + QPG+++ ++ W A+GMAAT + + IGGPG YL RPGFWQGGIGIAACW Sbjct: 149 HMDQPGITVTDEGWNAVGMAATGSVEIVFDGAWGLAIGGPGDYLARPGFWQGGIGIAACW 208 Query: 223 HGAATALVSVLRQGLAYTLSADSHALARLGSALCAGHAAAACLRESAARIDAHPRANAMQ 282 +GAA L VLR+ + + HALA LG+ ++AA LR SA +ID P+A+A + Sbjct: 209 YGAAQRLAEVLREHCSK--RPEPHALAHLGAVDSVLNSAACVLRASAEQIDRAPKADARE 266 Query: 283 DALRTRLTVERACLQIIEDLGAALGPHPYCGSRHSARLLADLPVWLRQSHAERDMTALA 341 A + R +E Q+ +G A+G P+C H A+L+ADLPV++RQSHAERD+ L Sbjct: 267 LAQQARACIEDTVEQVTHHVGRAVGAGPFCKDPHFAQLMADLPVYMRQSHAERDLAGLG 325 >gb|EFW80804.1| hypothetical protein PsgB076_10830 [Pseudomonas syringae pv. glycinea str. B076] Length = 337 Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats. Identities = 153/325 (47%), Positives = 197/325 (60%), Gaps = 6/325 (1%) Query: 19 ALEEFIAPALHKTPHTQLPVVAARLLRQLVVAGLDRLPLPGHGETLARWQALAAVAAQDM 78 AL EF+ H T+ L+ LV GLD+LPLP G+TL RW+ALA +A D+ Sbjct: 4 ALSEFLDWRKHGYADTR---ALGECLQALVNEGLDQLPLPASGQTLERWRALACIAGHDL 60 Query: 79 SLAKLFEAHTDALAILAEAHVPAPPH-SIWGVWCAQGRPGSLRLREQGDQVILEGEKSWC 137 L KL+E HTDALAI+AE P P S WG+W A+ + + GD + L G K+WC Sbjct: 61 GLCKLYEGHTDALAIMAELGAPPPEQFSTWGMWAAEPPQARVNISGTGDSIRLNGRKAWC 120 Query: 138 SGAAAVTHALLGHRDEQDRYWLLAIELSQPGVSIIEDDWAAIGMAATRTARLQLRTVTAQ 197 SGA A++HAL+ DE+ R L+A++L QPGV + D W A+GM AT + + T Q Sbjct: 121 SGATALSHALITTWDEEHRQQLVAVQLDQPGVHMTSDGWRAVGMGATGSVEVVFEHATGQ 180 Query: 198 VIGGPGFYLDRPGFWQGGIGIAACWHGAATALVSVLRQGLAYTLSADSHALARLGSALCA 257 IG PG YL RPGFWQGGIGIAACW+GA+ A+ L + + HALA LG+ A Sbjct: 181 AIGAPGGYLKRPGFWQGGIGIAACWYGASRAIAQRLLAQVGK--REEPHALAHLGAVDVA 238 Query: 258 GHAAAACLRESAARIDAHPRANAMQDALRTRLTVERACLQIIEDLGAALGPHPYCGSRHS 317 HAA LR +AA +D P NA A R R VE A +I+ +G A+G PYC H Sbjct: 239 LHAAIDVLRAAAAHLDQAPAENAEVLARRCRAYVEYAAELVIQHVGRAVGAGPYCKDPHF 298 Query: 318 ARLLADLPVWLRQSHAERDMTALAK 342 ARL+ DLPV+LRQSHAE+D+ AL + Sbjct: 299 ARLITDLPVFLRQSHAEQDLAALGQ 323