BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3083.p (230 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774859.1| YecA family protein [Herbaspirillum seropedi... 412 e-113 ref|ZP_08275325.1| hypothetical protein IMCC9480_177 [Oxalobacte... 343 1e-92 ref|YP_004753874.1| hypothetical protein CFU_3227 [Collimonas fu... 341 4e-92 ref|YP_001099193.1| putative protein translocase subunit [Hermin... 330 1e-88 ref|YP_001352543.1| hypothetical protein mma_0853 [Janthinobacte... 329 2e-88 >ref|YP_003774859.1| YecA family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62951.1| YecA family protein [Herbaspirillum seropedicae SmR1] Length = 233 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 202/228 (88%), Positives = 215/228 (94%) Query: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS Sbjct: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 Query: 61 RPEDTPKFKTGKEAERITSLIARTMNEIAITFEVAPKEYEPLFCEREHEGKSLLDGEAWA 120 RPEDTPKFK GKEAERITSLIAR+MNEIAITFEVAPKEYEPLFCEREHEGK LLD EAWA Sbjct: 61 RPEDTPKFKNGKEAERITSLIARSMNEIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWA 120 Query: 121 WGFWEGIQLRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGFWEGIQLRA++WD IFHSNLA LMRPIYLLGSDELEEEE L++DP+KTHKLA+E+E+ Sbjct: 121 WGFWEGIQLRAEQWDEIFHSNLAPLMRPIYLLGSDELEEEETKLIDDPIKTHKLAIEIEA 180 Query: 181 AIPHIYKYWLPHRKAAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGAD 228 AIPHI++YW P RK+AVE V+RD PK GRND CPCGSGKKYKKCCGAD Sbjct: 181 AIPHIHRYWAPKRKSAVEQVQRDAPKTGRNDPCPCGSGKKYKKCCGAD 228 >ref|ZP_08275325.1| hypothetical protein IMCC9480_177 [Oxalobacteraceae bacterium IMCC9480] gb|EGF31204.1| hypothetical protein IMCC9480_177 [Oxalobacteraceae bacterium IMCC9480] Length = 229 Score = 343 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 163/229 (71%), Positives = 188/229 (82%) Query: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 MHLDQPLSD EFDELD FLLSDRCA+D MTMD+LHGY TAL IGP+ V +AEWLP +WG Sbjct: 1 MHLDQPLSDKEFDELDKFLLSDRCAEDCMTMDSLHGYFTALVIGPEMVPLAEWLPPIWGE 60 Query: 61 RPEDTPKFKTGKEAERITSLIARTMNEIAITFEVAPKEYEPLFCEREHEGKSLLDGEAWA 120 E P FK KE + I LI+R MNE+AITFEVAPKE+EPLFCE E EGK LLDGEAWA Sbjct: 61 SDETGPDFKNPKEFDHIVGLISRFMNEVAITFEVAPKEFEPLFCEFEFEGKQLLDGEAWA 120 Query: 121 WGFWEGIQLRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGFWEG QLRA W PI+ SNLA++MRPIYLLG++E+EE E+ LV+ P+K HK+ +E+ES Sbjct: 121 WGFWEGTQLRADAWAPIWTSNLADIMRPIYLLGAEEIEESEMHLVDTPLKAHKMTIEIES 180 Query: 181 AIPHIYKYWLPHRKAAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGADK 229 AIPHI KYW P R + VETV+RD PK GRNDDCPCGSGKK+KKCCGAD+ Sbjct: 181 AIPHILKYWAPIRTSGVETVQRDSPKVGRNDDCPCGSGKKFKKCCGADE 229 >ref|YP_004753874.1| hypothetical protein CFU_3227 [Collimonas fungivorans Ter331] gb|AEK63051.1| conserved hypothetical protein; putative protein translocase subunit [Collimonas fungivorans Ter331] Length = 232 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 174/228 (76%), Positives = 202/228 (88%) Query: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 M+LD+PLSD EFDELDDFLLSDRCA+D MTMDTLHGYLTAL IGP++VL+ EWLP VWG Sbjct: 1 MNLDEPLSDKEFDELDDFLLSDRCAEDSMTMDTLHGYLTALVIGPEQVLLGEWLPHVWGP 60 Query: 61 RPEDTPKFKTGKEAERITSLIARTMNEIAITFEVAPKEYEPLFCEREHEGKSLLDGEAWA 120 +D PKFK+ KE E+I LIAR MNEIA+T EVAPKEYEPLFCE+E+EGKSLLDGEAW Sbjct: 61 SLKDAPKFKSDKEYEKIVGLIARYMNEIAVTLEVAPKEYEPLFCEQEYEGKSLLDGEAWT 120 Query: 121 WGFWEGIQLRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGFWEGI LRAK W+PI+HSNLA ++RPIYLLG++ELEEEE+AL EDPV+ HKLAVEVE+ Sbjct: 121 WGFWEGINLRAKAWEPIWHSNLATVVRPIYLLGAEELEEEEMALREDPVQRHKLAVEVEA 180 Query: 181 AIPHIYKYWLPHRKAAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGAD 228 AIP IY+YWLPHRK+AV T++R+ PK GRND+CPCGSGKK+KKCCG D Sbjct: 181 AIPEIYRYWLPHRKSAVTTIQRETPKVGRNDECPCGSGKKFKKCCGVD 228 >ref|YP_001099193.1| putative protein translocase subunit [Herminiimonas arsenicoxydans] emb|CAL61066.1| Conserved hypothetical protein, putative preprotein translocase subunit SecA [Herminiimonas arsenicoxydans] Length = 231 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 164/228 (71%), Positives = 191/228 (83%) Query: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 MHLDQPLSD EFDELD FLLSDR ADD M MD+LHGYLTAL +GP+EV +AEWLP VWG Sbjct: 1 MHLDQPLSDKEFDELDKFLLSDRTADDCMAMDSLHGYLTALVVGPEEVPLAEWLPHVWGE 60 Query: 61 RPEDTPKFKTGKEAERITSLIARTMNEIAITFEVAPKEYEPLFCEREHEGKSLLDGEAWA 120 E PKFK KE ERI LIAR MNEIAIT EVAPKEYEPLFCE E EGK +LDGEAWA Sbjct: 61 NAEAVPKFKNDKEYERIVGLIARFMNEIAITLEVAPKEYEPLFCEHEWEGKPVLDGEAWA 120 Query: 121 WGFWEGIQLRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGF G+ LRA+ W+PI SN+A LMRPIYLLG++E+EEEE+ LV++PVK HKL +E+E+ Sbjct: 121 WGFNLGMSLRAEAWEPIHTSNIAPLMRPIYLLGAEEIEEEELVLVDNPVKCHKLTIEIEA 180 Query: 181 AIPHIYKYWLPHRKAAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGAD 228 AIP I+K+WLPHRK+AV+TV+R+ PK GRND+C CGSGKK+KKCCGA+ Sbjct: 181 AIPEIHKFWLPHRKSAVKTVQRETPKVGRNDECSCGSGKKFKKCCGAE 228 >ref|YP_001352543.1| hypothetical protein mma_0853 [Janthinobacterium sp. Marseille] gb|ABR90375.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 234 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 166/227 (73%), Positives = 190/227 (83%) Query: 1 MHLDQPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGS 60 MHLDQPLSD EFDELD FLLSDR ADD M MD+LHGYLTAL +GP+EV +AEWLP VWG Sbjct: 1 MHLDQPLSDKEFDELDKFLLSDRTADDCMAMDSLHGYLTALVVGPEEVPLAEWLPHVWGE 60 Query: 61 RPEDTPKFKTGKEAERITSLIARTMNEIAITFEVAPKEYEPLFCEREHEGKSLLDGEAWA 120 E PKFK KE ERI LIAR MNEIAIT EVAPKEYEPLFCE E EGK +LDGEAWA Sbjct: 61 NAEAIPKFKNDKEYERIVGLIARFMNEIAITLEVAPKEYEPLFCEHEWEGKPVLDGEAWA 120 Query: 121 WGFWEGIQLRAKEWDPIFHSNLAELMRPIYLLGSDELEEEEIALVEDPVKTHKLAVEVES 180 WGF G+ LRA+ W+PI SN+A LMRPIYLLG++E+EEEEI LV++P+K HKL +E+ES Sbjct: 121 WGFNLGMSLRAEAWEPINSSNIAPLMRPIYLLGAEEIEEEEIVLVDNPIKCHKLTIEIES 180 Query: 181 AIPHIYKYWLPHRKAAVETVRRDGPKAGRNDDCPCGSGKKYKKCCGA 227 AIP I+K+WLPHRK+AV+TV+R+ PK GRND+C CGSGKKYKKCCGA Sbjct: 181 AIPEIHKFWLPHRKSAVKTVQREEPKIGRNDECSCGSGKKYKKCCGA 227