BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3082.p (203 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05086490.1| conserved hypothetical protein [Pseudovibrio ... 152 2e-35 ref|ZP_01112969.1| putative integral membrane protein [Reinekea ... 151 6e-35 ref|ZP_01545779.1| putative integral membrane protein [Stappia a... 149 3e-34 ref|ZP_05114614.1| conserved domain protein, putative [Labrenzia... 145 4e-33 ref|YP_004302617.1| hypothetical protein SL003B_0888 [Polymorphu... 145 4e-33 >ref|ZP_05086490.1| conserved hypothetical protein [Pseudovibrio sp. JE062] gb|EEA93015.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 254 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 86/197 (43%), Positives = 133/197 (67%) Query: 1 MLPLLIAMDIMGLITFRGKGDLRNLRILIPAALVGIAIGALTFRFTSDAMLRGLIGMLSI 60 +LPLL+AMD++GL +R D L++ IPA ++G+AIG T + S+A++R LIG +++ Sbjct: 53 LLPLLVAMDVVGLYAYRRTYDTTVLKLTIPAGILGVAIGWATAAYFSEAIIRLLIGGIAL 112 Query: 61 GFVVQRLLGRGRVLQPTSPSVARGSVWGTMSGFTSFIANAGGPPSVLYLAPQQLDKLVFV 120 FV++ +G + PS A+G WGT++GFTSF+++AGGPP +Y P +L ++F Sbjct: 113 AFVMKYWIGDKAEKEAPKPSKAKGIFWGTIAGFTSFVSHAGGPPFQIYALPLKLPTILFA 172 Query: 121 GTSVIFFSVINAVKVVPFVLLGLFDTRNLTTSLALLPLAPVGYWLGLKLLMKVDQVRVYQ 180 GT+VIFF+VINA+K++P+ +LG FD NLT S LLPLAP+ +LG+K+ + Y+ Sbjct: 173 GTAVIFFAVINAIKLIPYTMLGEFDATNLTVSAVLLPLAPISMYLGVKIAKVISPQLFYK 232 Query: 181 ITIAALFVAGCKLLWDA 197 IT +F+ KL+ D Sbjct: 233 ITYFGVFIVALKLIADG 249 >ref|ZP_01112969.1| putative integral membrane protein [Reinekea sp. MED297] gb|EAR11433.1| putative integral membrane protein [Reinekea sp. MED297] Length = 254 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 96/199 (48%), Positives = 134/199 (67%), Gaps = 5/199 (2%) Query: 1 MLPLLIAMDIMGLITFRGKGDLRNLRILIPAALVGIAIGALTFRFTSDAMLRGLIGMLSI 60 +LP+L MD++ L + G+ + NL+I+IP ALVGI IGALTFR+ S+A +R LIG +++ Sbjct: 51 LLPILCVMDLLALKKYWGQWHVLNLKIMIPGALVGIFIGALTFRYLSEAHIRILIGGIAL 110 Query: 61 GFVVQ--RLLGRGRVLQPTSPSVARGSVWGTMSGFTSFIANAGGPPSVLYLAPQQLDKLV 118 F + R G+V QP SV +GS WGT+SGFTSF +AGGPP +YL PQ+L + Sbjct: 111 VFALYFWRKQVSGKVSQP---SVVKGSFWGTVSGFTSFGIHAGGPPVSVYLLPQKLHPSI 167 Query: 119 FVGTSVIFFSVINAVKVVPFVLLGLFDTRNLTTSLALLPLAPVGYWLGLKLLMKVDQVRV 178 +VGT+ + F+VIN VK++P+ LG +T NLTTSL LLPLAP+G LG+ +V Sbjct: 168 YVGTNAVLFAVINYVKLIPYFWLGQLNTANLTTSLVLLPLAPIGIGLGVWAHNRVSSFVF 227 Query: 179 YQITIAALFVAGCKLLWDA 197 Y++ L +AG KLL+D Sbjct: 228 YRVINFFLMLAGGKLLYDG 246 >ref|ZP_01545779.1| putative integral membrane protein [Stappia aggregata IAM 12614] gb|EAV45708.1| putative integral membrane protein [Stappia aggregata IAM 12614] Length = 254 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 87/197 (44%), Positives = 131/197 (66%) Query: 1 MLPLLIAMDIMGLITFRGKGDLRNLRILIPAALVGIAIGALTFRFTSDAMLRGLIGMLSI 60 MLP+LI MDI+ LI +RG+ D ++L IL+PAA++GI IG T + +DA + LIG++S+ Sbjct: 52 MLPILIVMDIVALIAYRGRADWKSLSILLPAAVIGIGIGWATAAYVNDAFVIFLIGIMSL 111 Query: 61 GFVVQRLLGRGRVLQPTSPSVARGSVWGTMSGFTSFIANAGGPPSVLYLAPQQLDKLVFV 120 FV L + +V + + A+G+ WGT++GFTSFI++ GGPP +Y+ P ++ L+F Sbjct: 112 AFVADYLFKQRKVTTASGHNRAKGTFWGTIAGFTSFISHTGGPPFQMYMLPLRMAPLMFA 171 Query: 121 GTSVIFFSVINAVKVVPFVLLGLFDTRNLTTSLALLPLAPVGYWLGLKLLMKVDQVRVYQ 180 GT+VIFF+ +NA+K+VP+ LLG FD NL+TS+ L P+A V +G+ L+ V Y Sbjct: 172 GTAVIFFATVNAIKLVPYFLLGQFDATNLSTSVLLFPVALVATLVGVWLVRVVKAEMFYA 231 Query: 181 ITIAALFVAGCKLLWDA 197 I + V G KL +D Sbjct: 232 IIYTFMGVIGAKLTYDG 248 >ref|ZP_05114614.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] gb|EEE45213.1| conserved domain protein, putative [Labrenzia alexandrii DFL-11] Length = 254 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 83/203 (40%), Positives = 127/203 (62%) Query: 1 MLPLLIAMDIMGLITFRGKGDLRNLRILIPAALVGIAIGALTFRFTSDAMLRGLIGMLSI 60 MLP+L+ MD + L+ ++GK D R+L IL+PAA++GI IG T + +D + +IG++S+ Sbjct: 52 MLPILLVMDAVALMAYKGKADWRSLAILLPAAMLGIGIGWGTAAYVNDTFVTLMIGVISL 111 Query: 61 GFVVQRLLGRGRVLQPTSPSVARGSVWGTMSGFTSFIANAGGPPSVLYLAPQQLDKLVFV 120 FV + R + S ++ +GS WG ++GFTSFI++ GGPP +Y+ P +L ++F Sbjct: 112 AFVADYVFKRRKEAAALSHNIPKGSFWGAVAGFTSFISHTGGPPFQMYMLPLKLAPMLFA 171 Query: 121 GTSVIFFSVINAVKVVPFVLLGLFDTRNLTTSLALLPLAPVGYWLGLKLLMKVDQVRVYQ 180 GT+VIFF+ +NAVKV+P+ LG FDT NLTTS L P+A V G++L+ + Y Sbjct: 172 GTAVIFFATVNAVKVIPYFFLGQFDTTNLTTSAVLFPVALVATLAGVRLVRIIKAETFYT 231 Query: 181 ITIAALFVAGCKLLWDAAGAYLG 203 I + + G KL +D L Sbjct: 232 IIYVVMGLIGAKLTYDGLAGLLA 254 >ref|YP_004302617.1| hypothetical protein SL003B_0888 [Polymorphum gilvum SL003B-26A1] gb|ADZ69317.1| Hypothetical transmembrane protein [Polymorphum gilvum SL003B-26A1] Length = 254 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 93/203 (45%), Positives = 131/203 (64%) Query: 1 MLPLLIAMDIMGLITFRGKGDLRNLRILIPAALVGIAIGALTFRFTSDAMLRGLIGMLSI 60 MLP+L+ MD +GL +RG D R L IL+PA + G+ IG T + DA +R ++G++++ Sbjct: 52 MLPILLVMDAVGLFAYRGTFDRRTLLILLPAGVAGVGIGWATAAWVEDAHVRLIVGVIAL 111 Query: 61 GFVVQRLLGRGRVLQPTSPSVARGSVWGTMSGFTSFIANAGGPPSVLYLAPQQLDKLVFV 120 FV LLG R +P G +WG+++GFTSF+++ GGPP LY+ P +L VF Sbjct: 112 LFVADYLLGGARSREPRPQRTGPGLLWGSVAGFTSFVSHTGGPPFQLYVVPLRLAPAVFA 171 Query: 121 GTSVIFFSVINAVKVVPFVLLGLFDTRNLTTSLALLPLAPVGYWLGLKLLMKVDQVRVYQ 180 GT+VIFFSVINA+K+VP+ LG FD NL TS LLPLAP+ G++L+ VDQ Y+ Sbjct: 172 GTAVIFFSVINAIKLVPYFYLGQFDATNLVTSAVLLPLAPLATLAGVRLVRLVDQGLFYR 231 Query: 181 ITIAALFVAGCKLLWDAAGAYLG 203 + A + + G KL+WD A LG Sbjct: 232 LIYAFMAIVGLKLVWDGAWPLLG 254