BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3080.p (335 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774857.1| Zn-dependent protease (chaperone function) t... 555 e-156 ref|YP_004753876.1| peptidase [Collimonas fungivorans Ter331] >g... 478 e-133 ref|ZP_08276186.1| M48 family peptidase [Oxalobacteraceae bacter... 470 e-130 ref|YP_001099189.1| M48 family peptidase [Herminiimonas arsenico... 462 e-128 ref|YP_001352541.1| peptidase [Janthinobacterium sp. Marseille] ... 445 e-123 >ref|YP_003774857.1| Zn-dependent protease (chaperone function) transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ62949.1| Zn-dependent protease (chaperone function) transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 426 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 305/321 (95%), Positives = 312/321 (97%) Query: 1 MVYQIALVAGFGLISGAVDLPFDYYRQFKLEAGFGFNKMTRGLFFSDMIKQTLLGAVIGL 60 M+YQIALVAGFGLISGAVDLPFDYYRQF+LEAGFGFNKM+R LFFSDMIKQTLLGAVIGL Sbjct: 102 MLYQIALVAGFGLISGAVDLPFDYYRQFRLEAGFGFNKMSRALFFSDMIKQTLLGAVIGL 161 Query: 61 PLLWVVLVLMEKAGALWWFYTWIVLCAFQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIE 120 PLLWVVL LMEKAGALWWFYTWIVLC FQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIE Sbjct: 162 PLLWVVLALMEKAGALWWFYTWIVLCVFQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIE 221 Query: 121 GLMQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHE 180 GLMQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHE Sbjct: 222 GLMQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHE 281 Query: 181 LGHFKLKHIVKRVVVMFGLSLAFLALLGYLKGQAWFYTGLGVEPLLLGSNDAMALILFML 240 LGHFKLKHIVKRVVVMF +SLAFLALLGYLK QAWFYTGLGVEPLL+GSNDAMALILFML Sbjct: 282 LGHFKLKHIVKRVVVMFAMSLAFLALLGYLKQQAWFYTGLGVEPLLMGSNDAMALILFML 341 Query: 241 VLPIFTFLFSPLSSLSSRKHEFEADAFAAQHTDAQDLVSALVKLYEDNASTLTPDPLHSA 300 VLPIFTFL SPLSSLSSRKHEFEADAFAAQHT AQDLVSALVKLYEDNASTLTPDPLHSA Sbjct: 342 VLPIFTFLLSPLSSLSSRKHEFEADAFAAQHTQAQDLVSALVKLYEDNASTLTPDPLHSA 401 Query: 301 FYDSHPPASLRIQHLHAAIAA 321 FYDSHPPASLRI+ LH A+AA Sbjct: 402 FYDSHPPASLRIRRLHGALAA 422 >ref|YP_004753876.1| peptidase [Collimonas fungivorans Ter331] gb|AEK63053.1| peptidase [Collimonas fungivorans Ter331] Length = 460 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 260/322 (80%), Positives = 285/322 (88%), Gaps = 3/322 (0%) Query: 1 MVYQIALVAGFGLISGAVDLPFDYYRQFKLEAGFGFNKMTRGLFFSDMIKQTLLGAVIGL 60 MVYQI L+ F LISG +DLP DYY+QF LEA FGFNKMT LFF+DM+K +L+GA IGL Sbjct: 130 MVYQIGLLVAFALISGLIDLPLDYYKQFVLEARFGFNKMTVKLFFADMLKSSLIGAAIGL 189 Query: 61 PLLWVVLVLMEKAGALWWFYTWIVLCAFQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIE 120 PL+WV+L LM K+G LWWFY W+V AFQLLMLV++P+ IAPLFNKFT L DDSLR RIE Sbjct: 190 PLIWVILQLMAKSGGLWWFYAWLVFSAFQLLMLVLFPTVIAPLFNKFTPLNDDSLRDRIE 249 Query: 121 GLMQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHE 180 GLM+RVGFASKGLFVMDGSKRSAHGNAYFSGFG+GKRIVFFDTLLARLAPHEIEAVLAHE Sbjct: 250 GLMKRVGFASKGLFVMDGSKRSAHGNAYFSGFGAGKRIVFFDTLLARLAPHEIEAVLAHE 309 Query: 181 LGHFKLKHIVKRVVVMFGLSLAFLALLGYLKGQAWFYTGLGVEPLLLG---SNDAMALIL 237 LGHFKLKHIVKR+VVMF +SLAFLALLGYLK Q WFYTGLGV PLLL +NDAMALIL Sbjct: 310 LGHFKLKHIVKRIVVMFAISLAFLALLGYLKQQLWFYTGLGVNPLLLADLSNNDAMALIL 369 Query: 238 FMLVLPIFTFLFSPLSSLSSRKHEFEADAFAAQHTDAQDLVSALVKLYEDNASTLTPDPL 297 FML LPIFTFL SPLSS+SSRKHEFEADAFAA+HTDA DLV+ALVKLYEDNASTLTPDPL Sbjct: 370 FMLALPIFTFLLSPLSSISSRKHEFEADAFAAKHTDANDLVAALVKLYEDNASTLTPDPL 429 Query: 298 HSAFYDSHPPASLRIQHLHAAI 319 HSAFYDSHPPAS+RI L + + Sbjct: 430 HSAFYDSHPPASVRINKLASKL 451 >ref|ZP_08276186.1| M48 family peptidase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30341.1| M48 family peptidase [Oxalobacteraceae bacterium IMCC9480] Length = 321 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 249/318 (78%), Positives = 279/318 (87%) Query: 1 MVYQIALVAGFGLISGAVDLPFDYYRQFKLEAGFGFNKMTRGLFFSDMIKQTLLGAVIGL 60 M+YQI L+A F LI+G +DLP DYY+QF LE FGFNKMT GLFF+DM+K LLGA IGL Sbjct: 1 MLYQIVLLAAFALIAGLIDLPLDYYKQFVLEQRFGFNKMTPGLFFADMVKGGLLGAAIGL 60 Query: 61 PLLWVVLVLMEKAGALWWFYTWIVLCAFQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIE 120 PL+WV+L LME++GALWW Y W+V FQLLMLV+YP+ IAPLFNKFT L D+SL++RIE Sbjct: 61 PLVWVILTLMEQSGALWWLYAWLVWSGFQLLMLVLYPTVIAPLFNKFTPLADESLKTRIE 120 Query: 121 GLMQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHE 180 GLMQRVGFAS+GLFVMDGSKRSAHGNAYFSGFG+ KRIVFFDTLL+RLAP EIEAVLAHE Sbjct: 121 GLMQRVGFASQGLFVMDGSKRSAHGNAYFSGFGAAKRIVFFDTLLSRLAPPEIEAVLAHE 180 Query: 181 LGHFKLKHIVKRVVVMFGLSLAFLALLGYLKGQAWFYTGLGVEPLLLGSNDAMALILFML 240 LGHFKLKHI+KR+ +MF LSLAFLALLGYLK Q WFY GLGVEP L SNDAMALILFML Sbjct: 181 LGHFKLKHIIKRIAMMFALSLAFLALLGYLKNQVWFYNGLGVEPSLFISNDAMALILFML 240 Query: 241 VLPIFTFLFSPLSSLSSRKHEFEADAFAAQHTDAQDLVSALVKLYEDNASTLTPDPLHSA 300 VLP+FTF+F PL+S+SSRKHEFEADAFAA HTD +DLVSALVKLYEDNASTLTPDPLHSA Sbjct: 241 VLPVFTFVFGPLTSISSRKHEFEADAFAATHTDGRDLVSALVKLYEDNASTLTPDPLHSA 300 Query: 301 FYDSHPPASLRIQHLHAA 318 FYDSHP A++RI L A Sbjct: 301 FYDSHPSATMRINKLLAG 318 >ref|YP_001099189.1| M48 family peptidase [Herminiimonas arsenicoxydans] emb|CAL61062.1| putative peptidase M48 [Herminiimonas arsenicoxydans] Length = 418 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 242/313 (77%), Positives = 275/313 (87%) Query: 3 YQIALVAGFGLISGAVDLPFDYYRQFKLEAGFGFNKMTRGLFFSDMIKQTLLGAVIGLPL 62 YQ+ALV F LISG ++LPFDY+RQF LEA FGFN+M+ LFF+D+ K T+L +GL L Sbjct: 103 YQLALVLAFALISGLIELPFDYFRQFVLEARFGFNRMSPALFFADLFKSTVLSLALGLSL 162 Query: 63 LWVVLVLMEKAGALWWFYTWIVLCAFQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIEGL 122 +W+ L+LMEK+G LWW Y WIV C+FQ+LMLV+ P FIAP+FNKF LED++LR+RIE L Sbjct: 163 VWITLILMEKSGDLWWLYAWIVWCSFQMLMLVLVPLFIAPMFNKFKPLEDENLRTRIENL 222 Query: 123 MQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHELG 182 MQR+GFAS GLFVMDGS+RSAHGNAYFSGFG+ KRIVFFDTLL RLAPHEIEAVLAHELG Sbjct: 223 MQRIGFASSGLFVMDGSRRSAHGNAYFSGFGAAKRIVFFDTLLERLAPHEIEAVLAHELG 282 Query: 183 HFKLKHIVKRVVVMFGLSLAFLALLGYLKGQAWFYTGLGVEPLLLGSNDAMALILFMLVL 242 HFKLKHIVKR+ VMF SLA LALLGYLK QAWF+TGLGVEP++ SNDAMALILF LVL Sbjct: 283 HFKLKHIVKRICVMFAASLALLALLGYLKTQAWFFTGLGVEPMMGASNDAMALILFALVL 342 Query: 243 PIFTFLFSPLSSLSSRKHEFEADAFAAQHTDAQDLVSALVKLYEDNASTLTPDPLHSAFY 302 P+F+FLFSPL+SLSSRKHEFEADAFAAQHT +QDLVSALVKLYEDNASTLTPDPLHSAFY Sbjct: 343 PVFSFLFSPLTSLSSRKHEFEADAFAAQHTSSQDLVSALVKLYEDNASTLTPDPLHSAFY 402 Query: 303 DSHPPASLRIQHL 315 DSHPPAS+RI L Sbjct: 403 DSHPPASVRINKL 415 >ref|YP_001352541.1| peptidase [Janthinobacterium sp. Marseille] gb|ABR91048.1| subfamily M48A unassigned peptidase [Janthinobacterium sp. Marseille] Length = 419 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 240/316 (75%), Positives = 279/316 (88%) Query: 3 YQIALVAGFGLISGAVDLPFDYYRQFKLEAGFGFNKMTRGLFFSDMIKQTLLGAVIGLPL 62 YQ+ALV F LISG ++LPFDY+RQF LEA FGFN+M+ GLFF+D++K T++ +GL L Sbjct: 103 YQLALVLSFALISGLIELPFDYFRQFVLEARFGFNRMSPGLFFTDLMKSTVISLSLGLGL 162 Query: 63 LWVVLVLMEKAGALWWFYTWIVLCAFQLLMLVIYPSFIAPLFNKFTALEDDSLRSRIEGL 122 +W+ ++LMEK+G LWW Y WI+ C+FQ+LMLV+ P FIAP+FNKF LED++LR+RIE L Sbjct: 163 VWITIILMEKSGDLWWLYAWILWCSFQMLMLVLVPLFIAPMFNKFKPLEDENLRTRIENL 222 Query: 123 MQRVGFASKGLFVMDGSKRSAHGNAYFSGFGSGKRIVFFDTLLARLAPHEIEAVLAHELG 182 MQR+GF + GLFVMDGS+RSAHGNAYFSGFG+ KRIVFFDTLL RLAP+EIEAVLAHELG Sbjct: 223 MQRIGFKASGLFVMDGSRRSAHGNAYFSGFGAAKRIVFFDTLLERLAPNEIEAVLAHELG 282 Query: 183 HFKLKHIVKRVVVMFGLSLAFLALLGYLKGQAWFYTGLGVEPLLLGSNDAMALILFMLVL 242 HFKLKHIVKR+VVMF SLAFLALLGYLK QAWFYTGLGVEP++ SNDAMALILF LVL Sbjct: 283 HFKLKHIVKRIVVMFAASLAFLALLGYLKNQAWFYTGLGVEPMMGASNDAMALILFALVL 342 Query: 243 PIFTFLFSPLSSLSSRKHEFEADAFAAQHTDAQDLVSALVKLYEDNASTLTPDPLHSAFY 302 P+F FL SPL+SLSSRKHEFEADAFAAQHT++QDLVSALVKLYEDNASTLTPDPLHSAFY Sbjct: 343 PVFAFLLSPLTSLSSRKHEFEADAFAAQHTNSQDLVSALVKLYEDNASTLTPDPLHSAFY 402 Query: 303 DSHPPASLRIQHLHAA 318 DSHPPA++RI L AA Sbjct: 403 DSHPPATVRINKLLAA 418