BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3062.p (545 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774537.1| phospholipase D family protein [Herbaspirill... 836 0.0 ref|YP_003673944.1| phospholipase D/transphosphatidylase [Methyl... 554 e-155 ref|YP_004681481.1| cardiolipin synthase Cls [Cupriavidus necato... 548 e-153 ref|YP_521371.1| phospholipase D/transphosphatidylase [Rhodofera... 510 e-142 ref|YP_004695314.1| phospholipase D/Transphosphatidylase [Nitros... 506 e-141 >ref|YP_003774537.1| phospholipase D family protein [Herbaspirillum seropedicae SmR1] gb|ADJ62629.1| phospholipase D family protein [Herbaspirillum seropedicae SmR1] Length = 472 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 427/472 (90%), Positives = 449/472 (95%) Query: 74 MTNKKMRLRSWSAAGLVLLLSSVMLAACSSLPTIVPDMDTQSARTIQMKGGRGVLSEAQA 133 MTNK ++ R W A LVL S +L++CSSLPTIVPDMDTQSARTIQMKGGRGVLSEAQ+ Sbjct: 1 MTNKNIKPRRWCATLLVLAGLSALLSSCSSLPTIVPDMDTQSARTIQMKGGRGVLSEAQS 60 Query: 134 KAALDKLRAQNADNTLLDRHVAIEGAITGSPLVTGNKVTLLIDGPATYASMQQAIQAARY 193 KA L+KLRAQNADNTLLDRHVAIEGAITGSPLVTGNKVTLLIDGPATYASMQQAIQAARY Sbjct: 61 KAVLEKLRAQNADNTLLDRHVAIEGAITGSPLVTGNKVTLLIDGPATYASMQQAIQAARY 120 Query: 194 HINMETYIMEDDEVGRQFADLLIAMQKKGVQVNLMYDSVGSINTPREFFQPLIDAGVHVL 253 HINMETYIMEDDEVGRQFADLLIAMQ KGVQVNLMYDSVG++NTPR FFQP+IDAG+ VL Sbjct: 121 HINMETYIMEDDEVGRQFADLLIAMQNKGVQVNLMYDSVGALNTPRTFFQPMIDAGIQVL 180 Query: 254 EFNPLNPTQLRKDWAVNQRDHRKLLVVDGKTAFVGGINISSVYSSGSFSTRKKKPQLNKD 313 E+NPLNPTQLRKDW VNQRDHRKLLVVDGKTAFVGGINISSVYSSGSFSTRKKKP++N + Sbjct: 181 EYNPLNPTQLRKDWEVNQRDHRKLLVVDGKTAFVGGINISSVYSSGSFSTRKKKPRVNAE 240 Query: 314 GEQIPWRDTQVRIDGPVALEFQKLFIETWGKQRGPDLGDHRYFPPVAPAGNEIVRAIGSS 373 GEQIPWRDTQVRIDGPVALEFQKLF++TW KQRGP LGDHRYFP VAPAGNEIVRAIGSS Sbjct: 241 GEQIPWRDTQVRIDGPVALEFQKLFVDTWNKQRGPALGDHRYFPTVAPAGNEIVRAIGSS 300 Query: 374 PDDPYSIIYATFISAIQHAESSIYLTNAYFVPDPQLRDSLKDAARRGVDVRLILPSHSDS 433 PDDPYS+IYATFISAIQHAE +IYLTNAYFVPDPQLRDSLKDAARRGVDVRLILPSHSDS Sbjct: 301 PDDPYSVIYATFISAIQHAEKAIYLTNAYFVPDPQLRDSLKDAARRGVDVRLILPSHSDS 360 Query: 434 SLVLYASRSFYSELLEAGVRIYERQDALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEIN 493 SLVLYASRSFY ELLEAG+RIYERQDALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEIN Sbjct: 361 SLVLYASRSFYQELLEAGIRIYERQDALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEIN 420 Query: 494 AVILSPQFGAQNKTMFDRDLGASKEITKEQWEQRPISERMKEFGASVWSRLL 545 AVILSPQFG Q K+MFDRDLGASKEITKEQWEQRPISERMKEFGASVW+RLL Sbjct: 421 AVILSPQFGVQMKSMFDRDLGASKEITKEQWEQRPISERMKEFGASVWARLL 472 >ref|YP_003673944.1| phospholipase D/transphosphatidylase [Methylotenera versatilis 301] gb|ADI29367.1| phospholipase D/Transphosphatidylase [Methylotenera versatilis 301] Length = 464 Score = 554 bits (1428), Expect = e-155, Method: Composition-based stats. Identities = 268/446 (60%), Positives = 336/446 (75%), Gaps = 6/446 (1%) Query: 100 ACSSLPTIVPDMDTQSARTIQMKGGRGVLSEAQAKAALDKLRAQNADNTLLDRHVAIEGA 159 C+S+PT+VPDM Q A +++ G G LS Q+KA + KL+ D + D+H+A+E Sbjct: 25 GCTSIPTMVPDMAMQQAHPVKLNGANGELSAKQSKAIIAKLQKNGDDTNIFDKHLALEAE 84 Query: 160 ITGSPLVTGNKVTLLIDGPATYASMQQAIQAARYHINMETYIMEDDEVGRQFADLLIAMQ 219 I GSPLV GNKV LLIDGP TY +M AI++A+ HINMET+I+EDDE+G++FA LIA Q Sbjct: 85 IVGSPLVVGNKVELLIDGPTTYDAMFAAIESAKDHINMETFIIEDDEIGQRFAKALIAKQ 144 Query: 220 KKGVQVNLMYDSVGSINTPREFFQPLIDAGVHVLEFNPLNPTQLRKDWAVNQRDHRKLLV 279 GVQVNL+YDSVGSI+TP FF L +G++VLE+NP+NP RK W VNQRDHRKLL+ Sbjct: 145 ASGVQVNLIYDSVGSISTPTTFFDALKASGINVLEYNPINPLVTRKGWQVNQRDHRKLLI 204 Query: 280 VDGKTAFVGGINISSVYSSGSFSTRKKKPQLNKDGEQIPWRDTQVRIDGPVALEFQKLFI 339 VDG+ AFVGGINISSVYSSGSF + K NK PWRDT +R++GPV EFQKLF+ Sbjct: 205 VDGQIAFVGGINISSVYSSGSFG--RSKTTKNKQ----PWRDTHLRMEGPVVSEFQKLFM 258 Query: 340 ETWGKQRGPDLGDHRYFPPVAPAGNEIVRAIGSSPDDPYSIIYATFISAIQHAESSIYLT 399 TW +Q+G L YFP G+E+VRAIGSSPD+PYS IY+T ISAI AE+ +++T Sbjct: 259 TTWSQQKGQTLAVKNYFPDYPVKGSEVVRAIGSSPDEPYSQIYSTLISAINSAETQVFIT 318 Query: 400 NAYFVPDPQLRDSLKDAARRGVDVRLILPSHSDSSLVLYASRSFYSELLEAGVRIYERQD 459 NAYFVPDP+L +LK+A +RGVDVRL+LP +DS++V YASRS+Y ELL A V+IYERQD Sbjct: 319 NAYFVPDPKLLTALKEAVQRGVDVRLLLPEKTDSTMVFYASRSYYDELLTANVKIYERQD 378 Query: 460 ALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEINAVILSPQFGAQNKTMFDRDLGASKEI 519 ALLH+KTA+IDGVWSTIGSTNLDWRSF NQEINAV+L FG Q ++MF++DL +S I Sbjct: 379 ALLHAKTAMIDGVWSTIGSTNLDWRSFTNNQEINAVVLGQGFGTQMQSMFEKDLESSTLI 438 Query: 520 TKEQWEQRPISERMKEFGASVWSRLL 545 T E W R I+ R+KE A +W+R L Sbjct: 439 TLESWRSRSIAARIKERAARLWARFL 464 >ref|YP_004681481.1| cardiolipin synthase Cls [Cupriavidus necator N-1] gb|AEI80249.1| cardiolipin synthase Cls [Cupriavidus necator N-1] Length = 431 Score = 548 bits (1412), Expect = e-153, Method: Composition-based stats. Identities = 267/435 (61%), Positives = 333/435 (76%), Gaps = 4/435 (0%) Query: 111 MDTQSARTIQMKGGRGVLSEAQAKAALDKLRAQNADNTLLDRHVAIEGAITGSPLVTGNK 170 M ++ + +Q+ G G LS Q+K L +L++ + + + DRH+A+E AI GSPLV GNK Sbjct: 1 MRSRPDQPVQLGGAHGPLSAQQSKEILSRLKSHSDETNIFDRHLALEAAIVGSPLVVGNK 60 Query: 171 VTLLIDGPATYASMQQAIQAARYHINMETYIMEDDEVGRQFADLLIAMQKKGVQVNLMYD 230 V LL DGPAT+ +M AI++A+ HINMETYI+EDD VG +FAD LI Q +GVQVNL+YD Sbjct: 61 VLLLQDGPATFQAMFAAIRSAKDHINMETYIIEDDAVGNRFADALIEKQAQGVQVNLIYD 120 Query: 231 SVGSINTPREFFQPLIDAGVHVLEFNPLNPTQLRKDWAVNQRDHRKLLVVDGKTAFVGGI 290 SVG+IN+P+E+F L D+G+ VLEFNP+NP +K W VNQRDHRKLL+VDG+ AF+GGI Sbjct: 121 SVGAINSPKEYFMRLSDSGIKVLEFNPVNPLSAKKGWEVNQRDHRKLLIVDGRIAFLGGI 180 Query: 291 NISSVYSSGSFSTRKKKPQLNKDGEQIPWRDTQVRIDGPVALEFQKLFIETWGKQRGPDL 350 NISSVYSSGSF + K+ DG PWRDT ++++GPV EFQKLF+ETWGKQ+G L Sbjct: 181 NISSVYSSGSFRPQSKR---RLDGSP-PWRDTHLKVEGPVVREFQKLFLETWGKQKGEPL 236 Query: 351 GDHRYFPPVAPAGNEIVRAIGSSPDDPYSIIYATFISAIQHAESSIYLTNAYFVPDPQLR 410 YFP + G E+VRAIGSSPD+PYS+IYAT +SAI A +S+YLTNAYFVPDPQL Sbjct: 237 APRNYFPQLGNTGTEVVRAIGSSPDEPYSLIYATLLSAIGSAVTSVYLTNAYFVPDPQLL 296 Query: 411 DSLKDAARRGVDVRLILPSHSDSSLVLYASRSFYSELLEAGVRIYERQDALLHSKTALID 470 +LKDAA RGVDV+LILPS +DS LV +A RSFY ELL +GV++YER+D LLHSKTA+ID Sbjct: 297 AALKDAASRGVDVKLILPSKTDSWLVFFAGRSFYEELLRSGVKLYERRDVLLHSKTAVID 356 Query: 471 GVWSTIGSTNLDWRSFVYNQEINAVILSPQFGAQNKTMFDRDLGASKEITKEQWEQRPIS 530 GVWSTIGSTNLDWRSF++N E+NAV+L +FGAQ + MF+ DL AS IT EQW R I Sbjct: 357 GVWSTIGSTNLDWRSFLHNDEVNAVVLGQEFGAQMQAMFEVDLAASNPITLEQWNDRSIG 416 Query: 531 ERMKEFGASVWSRLL 545 RMKE A VW+ L Sbjct: 417 MRMKEMTARVWAYWL 431 >ref|YP_521371.1| phospholipase D/transphosphatidylase [Rhodoferax ferrireducens T118] gb|ABD67840.1| cardiolipin synthetase 2 [Rhodoferax ferrireducens T118] Length = 462 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 250/465 (53%), Positives = 334/465 (71%), Gaps = 9/465 (1%) Query: 81 LRSWSAAGLVLLLSSVMLAACSSLPTIVPDMDTQSARTIQMKGGRGVLSEAQAKAALDKL 140 LRS + A + ++ AAC++LP + + + + + RG L ++ A L +L Sbjct: 7 LRSAATA-----VGALAFAACATLPDTDELIQRHAGQAARFETARGALPAQKSAAILAQL 61 Query: 141 RAQNADNTLLDRHVAIEGAITGSPLVTGNKVTLLIDGPATYASMQQAIQAARYHINMETY 200 ++Q+ D +LD+ +A+E A+ SPLV GNKVTLL DG ATY +M AI++AR HIN+E+Y Sbjct: 62 KSQSGDIDILDKQIALEQAVNDSPLVLGNKVTLLQDGAATYPAMFAAIRSARDHINLESY 121 Query: 201 IMEDDEVGRQFADLLIAMQKKGVQVNLMYDSVGSINTPREFFQPLIDAGVHVLEFNPLNP 260 I+E+DEVGRQF+DLL+A Q +GVQVN++YDSVG++NTP+ FF+ L G+ VLEFNP+NP Sbjct: 122 IIENDEVGRQFSDLLLAQQARGVQVNVIYDSVGALNTPKAFFERLKQGGIEVLEFNPINP 181 Query: 261 TQLRKDWAVNQRDHRKLLVVDGKTAFVGGINISSVYSSGSFSTRKKKPQLNKDGEQIPWR 320 + W +N RDHRKLL+VDG+ AF+GGINISSVY SGS +R K N D WR Sbjct: 182 LTAKGPWMINHRDHRKLLLVDGRIAFIGGINISSVYGSGSIPSRSHKAAANTD----EWR 237 Query: 321 DTQVRIDGPVALEFQKLFIETWGKQRGPDLGDHRYFPPVAPAGNEIVRAIGSSPDDPYSI 380 DT ++I+GPV EFQKLF++TW KQRG L YFP + G +IVR IGS+PDDP+S+ Sbjct: 238 DTDLQIEGPVVSEFQKLFLQTWEKQRGRPLATKNYFPALKVQGKDIVRTIGSTPDDPFSL 297 Query: 381 IYATFISAIQHAESSIYLTNAYFVPDPQLRDSLKDAARRGVDVRLILPSHSDSSLVLYAS 440 +Y T ISAI +AE ++LT AYFVPDPQL +L AA RGVDV+LILPSHSDS LV +A Sbjct: 298 MYLTLISAIGNAEKQVHLTQAYFVPDPQLLQALVAAAGRGVDVKLILPSHSDSGLVFHAG 357 Query: 441 RSFYSELLEAGVRIYERQDALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEINAVILSPQ 500 R+ Y+ELL+ GV++YER LLH+KTA+IDGVWST+GS+NLDWRSF+ N EI+AV+L + Sbjct: 358 RAHYTELLQGGVKLYERVGGLLHAKTAVIDGVWSTVGSSNLDWRSFLDNNEIDAVVLGQE 417 Query: 501 FGAQNKTMFDRDLGASKEITKEQWEQRPISERMKEFGASVWSRLL 545 F + + MF DL AS+ I + W+ RP+ R+KE+ A VW RLL Sbjct: 418 FAQKMEAMFASDLQASQAIDLQGWQHRPLQFRIKEWLARVWERLL 462 >ref|YP_004695314.1| phospholipase D/Transphosphatidylase [Nitrosomonas sp. Is79A3] gb|AEJ01915.1| phospholipase D/Transphosphatidylase [Nitrosomonas sp. Is79A3] Length = 461 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 246/446 (55%), Positives = 319/446 (71%), Gaps = 4/446 (0%) Query: 100 ACSSLPTIVPDMDTQSARTIQMKGGRGVLSEAQAKAALDKLRAQNADNTLLDRHVAIEGA 159 C++LP + A+ K G +S ++ A ++KL+ ++ D +LD+ +A+E Sbjct: 20 GCATLPDTQFLSERYIAQAAHFKDAWGSISAKRSAAIVEKLKQKSGDIDILDKQIALEQE 79 Query: 160 ITGSPLVTGNKVTLLIDGPATYASMQQAIQAARYHINMETYIMEDDEVGRQFADLLIAMQ 219 I GSPLV GNKV LL DGPATY +M AI+ A+ HIN+E++ +ED++VG+QFADLLI Q Sbjct: 80 IVGSPLVVGNKVILLQDGPATYQAMFAAIRKAQDHINLESFTIEDNDVGQQFADLLIERQ 139 Query: 220 KKGVQVNLMYDSVGSINTPREFFQPLIDAGVHVLEFNPLNPTQLRKDWAVNQRDHRKLLV 279 +GVQVNL+YDS G+I T R FF L AG+ VLEFNP+NP ++K W N RDHRKLLV Sbjct: 140 AQGVQVNLIYDSYGTIGTARTFFDRLAQAGIQVLEFNPINPLLIKKSWTPNNRDHRKLLV 199 Query: 280 VDGKTAFVGGINISSVYSSGSFSTRKKKPQLNKDGEQIPWRDTQVRIDGPVALEFQKLFI 339 VDG TAF+GGINIS+ YS+GS RK++P G WRDT ++I+GPV EFQKLF+ Sbjct: 200 VDGHTAFLGGINISNAYSTGSSIRRKEEPVDQTRG----WRDTDIQIEGPVVAEFQKLFL 255 Query: 340 ETWGKQRGPDLGDHRYFPPVAPAGNEIVRAIGSSPDDPYSIIYATFISAIQHAESSIYLT 399 +TW KQ G L YFP +AP G EI+RAIGS+PDDPYS+IY T I+AI +AE +Y+T Sbjct: 256 QTWNKQHGKTLAQRNYFPLIAPQGKEIIRAIGSTPDDPYSLIYLTLIAAITNAEKQVYIT 315 Query: 400 NAYFVPDPQLRDSLKDAARRGVDVRLILPSHSDSSLVLYASRSFYSELLEAGVRIYERQD 459 NAYFVPDPQL ++L DAA RGVDVRLILPS+SDS + +A RS YSELL+ GV+IYERQ Sbjct: 316 NAYFVPDPQLLNALLDAAGRGVDVRLILPSYSDSVVAFHAGRSHYSELLKGGVKIYERQG 375 Query: 460 ALLHSKTALIDGVWSTIGSTNLDWRSFVYNQEINAVILSPQFGAQNKTMFDRDLGASKEI 519 ALLH KTA++D VWS +GS+NLDWRS + N EINAVIL F Q + + RD+ S I Sbjct: 376 ALLHVKTAIVDSVWSCVGSSNLDWRSALDNDEINAVILGRDFAQQMQAAYFRDIANSNAI 435 Query: 520 TKEQWEQRPISERMKEFGASVWSRLL 545 E+WE+RP+ R+KE+ A +W R+ Sbjct: 436 ELEEWERRPLLLRLKEWTARLWGRMF 461