BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3061.p (457 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774538.1| sulfite reductase, flavoprotein component [H... 632 e-179 ref|YP_004485869.1| flavodoxin/nitric oxide synthase [Delftia sp... 414 e-113 ref|YP_001561561.1| flavodoxin/nitric oxide synthase [Delftia ac... 413 e-113 ref|ZP_04589880.2| sulfite reductase (NADPH) flavoprotein, alpha... 406 e-111 ref|ZP_03543635.1| flavodoxin/nitric oxide synthase [Comamonas t... 403 e-110 >ref|YP_003774538.1| sulfite reductase, flavoprotein component [Herbaspirillum seropedicae SmR1] gb|ADJ62630.1| sulfite reductase, flavoprotein component, protein [Herbaspirillum seropedicae SmR1] Length = 850 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 323/433 (74%), Positives = 362/433 (83%), Gaps = 4/433 (0%) Query: 27 SLQALAQSTPESLRHHRRILFIASTFGEGDAPDSARGFEKRLRQAAGQSLAHVHYAILAL 86 +LQALAQ+T E+LRHH R+L IASTFGEGDAPDSARGFE+RLRQAAGQSLAH+HYA+LAL Sbjct: 420 TLQALAQTTAETLRHHPRLLLIASTFGEGDAPDSARGFERRLRQAAGQSLAHLHYAVLAL 479 Query: 87 GDRHYAQFCGFGHTLDHGLRQCGAKPLFPLVEVDRMAGVALRKWDTELAAHGLQASVSEL 146 GDRHY FCGFGHTLDHGLRQCGAKP+FPLVEVDRM ALRKW++ELA+HGL A+VS+L Sbjct: 480 GDRHYTSFCGFGHTLDHGLRQCGAKPMFPLVEVDRMDAAALRKWESELASHGLDAAVSDL 539 Query: 147 LPTTAPAWQQWKLTRRVLLNPGSQGAPLYHIELQPQDGS--LPDWQAGALVEILPRHAPD 204 LPT++P W W L R LN GSQG PL+H+ LQ D S P WQAGAL+E++PRHAPD Sbjct: 540 LPTSSPTWPSWVLVERHHLNAGSQGEPLFHLVLQSADSSQPAPAWQAGALLEVMPRHAPD 599 Query: 205 RIALLLQRLQLDGSAMVSHQGRQKTLADALACSVLPTHPVRDAQALADQLQPLAARSYSV 264 R+AL+LQRL LDG+ V +G + +LADALACSVLP DAQ LA QLQPL ARSYSV Sbjct: 600 RVALVLQRLGLDGATEVHCRGMRCSLADALACSVLPMQAAADAQTLAQQLQPLTARSYSV 659 Query: 265 ASVPQDGAVHLLVRQVRHEDGLGLASGWLTEFAPDDASIDLRLVENAGFAPVAADTPAIF 324 AS QDG V LLVRQ RHEDGLGLASGWLTE+AP A + RLV+NAGFAPV+ADTPAIF Sbjct: 660 ASAMQDGTVQLLVRQQRHEDGLGLASGWLTEYAPLGARLQARLVDNAGFAPVSADTPAIF 719 Query: 325 IGNGSGLAGLRGHLHARMQHGEANSRNWLLFGERNERYDFLYADELQDWLEHGRLARLDL 384 IGNGSG+AGLRGHL R+ G +RNWLLFGERNERYDFLY +ELQ WL+ G+LARLDL Sbjct: 720 IGNGSGMAGLRGHLRQRIHAG--GTRNWLLFGERNERYDFLYREELQAWLQQGQLARLDL 777 Query: 385 AFSRDQSERLYVQDRLREAGPELRQWLDQGAVIYVCGSLEGMAAGVDAVLTDLLGEAGLH 444 AFSRDQ R+YVQDRLREA ELR WLDQGAV+YVCGSL+GMAAGVDAVLT LLGE GL Sbjct: 778 AFSRDQEARIYVQDRLREAAGELRHWLDQGAVLYVCGSLDGMAAGVDAVLTSLLGETGLQ 837 Query: 445 ALIEQNRYRRDVY 457 LIEQNRYRRDVY Sbjct: 838 DLIEQNRYRRDVY 850 >ref|YP_004485869.1| flavodoxin/nitric oxide synthase [Delftia sp. Cs1-4] gb|AEF87514.1| flavodoxin/nitric oxide synthase [Delftia sp. Cs1-4] Length = 872 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 243/457 (53%), Positives = 289/457 (63%), Gaps = 19/457 (4%) Query: 18 ACAAAACPCSLQALAQSTPESLRHHRRILFIASTFGEGDAPDSARGFEKRLRQAAGQSLA 77 A A SLQ++A E LRHHRR+LF+ASTFGEGD PD+AR F + L A+G +L Sbjct: 418 ALRGAGMAASLQSVAALDAEQLRHHRRVLFVASTFGEGDPPDAARRFARLLGAASGSALP 477 Query: 78 HVHYAILALGDRHYAQFCGFGHTLDHGLRQCGAKPLFPLVEVDRMAGVALRKWDTELAAH 137 H+ Y +LALGDR YA FCGFGH LDH LR+ GA+P+FPL+E+D A W LA H Sbjct: 478 HLQYGLLALGDRQYAAFCGFGHALDHQLRRLGAQPVFPLIEMDGEQPQAWNAWQQALAGH 537 Query: 138 -GLQASVSELLPTTAP-------AWQQWKLTRRVLLNPGSQGAPLYHIELQPQDGSLPDW 189 G S+ LP +A A+ W L R L N GSQGA LY +EL P +G P W Sbjct: 538 FGAMPPASDALPASAAGPLADATAFAAWPLQARSLCNAGSQGAGLYVLELSPPEGVAPLW 597 Query: 190 QAGALVEILPRHAPDRIALLLQRLQLDGSAMVSHQGRQKTLADALACSVLPT----HPVR 245 +AGAL E+LPRH + L + DGSA V + + TL +ALA SVLP P Sbjct: 598 RAGALAEVLPRHGAATVQAWLAAQECDGSAPVQWRQQSCTLGEALAASVLPAPGDIAPGT 657 Query: 246 DAQALADQLQPLAARSYSVASVPQDGAVHLLVRQVRHEDGLGLASGWLTEFAPDDASIDL 305 QA+AD L+PL RSYSVAS+PQDG V LLVRQ RH+ GLG+ASGWLT A S+ + Sbjct: 658 APQAVADALRPLLPRSYSVASLPQDGHVRLLVRQARHDGGLGVASGWLTAHAAQGTSVAM 717 Query: 306 RLVENAGFAP-----VAADTPAIFIGNGSGLAGLRGHLHARMQHGEANSRNWLLFGERNE 360 RLVEN F P D PAIFIGNGSG AGLRGHL ARM G RNWLLFGER + Sbjct: 718 RLVENRAFEPRDEADAEPDAPAIFIGNGSGYAGLRGHLLARMHAGR--HRNWLLFGERQQ 775 Query: 361 RYDFLYADELQDWLEHGRLARLDLAFSRDQSERLYVQDRLREAGPELRQWLDQGAVIYVC 420 +D E+ WL G+L R D +SRDQ+ R YVQD LREA LR W+ GAV+YVC Sbjct: 776 AHDGYCEAEVSGWLAAGKLQRADFIYSRDQARRCYVQDALREAAEPLRDWIADGAVLYVC 835 Query: 421 GSLEGMAAGVDAVLTDLLGEAGLHALIEQNRYRRDVY 457 GS +GMAAGVDA L D+LG + LI + RYRRDVY Sbjct: 836 GSADGMAAGVDAALADILGATAVEDLIVEGRYRRDVY 872 >ref|YP_001561561.1| flavodoxin/nitric oxide synthase [Delftia acidovorans SPH-1] gb|ABX33176.1| flavodoxin/nitric oxide synthase [Delftia acidovorans SPH-1] Length = 885 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 243/457 (53%), Positives = 288/457 (63%), Gaps = 19/457 (4%) Query: 18 ACAAAACPCSLQALAQSTPESLRHHRRILFIASTFGEGDAPDSARGFEKRLRQAAGQSLA 77 A A SLQ++A E LRHHRR+LF+ASTFGEGD PD+AR F + L A+G +L Sbjct: 431 ALRGAGMAASLQSVAALDAEQLRHHRRVLFVASTFGEGDPPDAARRFARLLGAASGSALP 490 Query: 78 HVHYAILALGDRHYAQFCGFGHTLDHGLRQCGAKPLFPLVEVDRMAGVALRKWDTELAAH 137 H+ Y +LALGDR YA FCGFGH LDH LR+ GA+P+FPL+E+D A W LA H Sbjct: 491 HLQYGLLALGDRQYAAFCGFGHALDHQLRRLGAQPVFPLIEMDGEQPQAWNAWQQALAGH 550 Query: 138 -GLQASVSELLPTTAP-------AWQQWKLTRRVLLNPGSQGAPLYHIELQPQDGSLPDW 189 G S+ LP +A A+ W L R L N GSQGA LY +EL P +G P W Sbjct: 551 FGALPPASDALPASAAGPLADATAFAAWPLQARSLCNAGSQGAGLYVLELSPPEGVAPLW 610 Query: 190 QAGALVEILPRHAPDRIALLLQRLQLDGSAMVSHQGRQKTLADALACSVLPT----HPVR 245 +AGAL E+LPRH + L + DGSA V + + TL +ALA SVLP P Sbjct: 611 RAGALAEVLPRHGAATVQAWLAAQECDGSAPVQWRQQTCTLGEALAASVLPAPGDIAPGT 670 Query: 246 DAQALADQLQPLAARSYSVASVPQDGAVHLLVRQVRHEDGLGLASGWLTEFAPDDASIDL 305 QA+AD L+PL RSYSVAS+PQDG V LLVRQ RH+ GLG+ASGWLT A S+ + Sbjct: 671 APQAVADALRPLLPRSYSVASLPQDGHVRLLVRQARHDGGLGVASGWLTAHAAQGISVAM 730 Query: 306 RLVENAGFAP-----VAADTPAIFIGNGSGLAGLRGHLHARMQHGEANSRNWLLFGERNE 360 RLVEN F P D PAIFIGNGSG AGLRGHL ARM G RNWLLFGER Sbjct: 731 RLVENRAFEPRDEADAEPDAPAIFIGNGSGYAGLRGHLLARMHAGR--HRNWLLFGERQR 788 Query: 361 RYDFLYADELQDWLEHGRLARLDLAFSRDQSERLYVQDRLREAGPELRQWLDQGAVIYVC 420 +D E+ WL G+L R D +SRDQ+ R YVQD LREA LR W+ GAV+YVC Sbjct: 789 AHDGYCEAEVSGWLAAGKLQRADFIYSRDQARRRYVQDALREAAEPLRDWIADGAVLYVC 848 Query: 421 GSLEGMAAGVDAVLTDLLGEAGLHALIEQNRYRRDVY 457 GS +GMAAGVDA L D+LG + LI + RYRRDVY Sbjct: 849 GSADGMAAGVDAALADILGATAVEDLIVEGRYRRDVY 885 >ref|ZP_04589880.2| sulfite reductase (NADPH) flavoprotein, alpha-component [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI04335.1| sulfite reductase (NADPH) flavoprotein, alpha-component [Pseudomonas syringae pv. oryzae str. 1_6] Length = 841 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 230/442 (52%), Positives = 285/442 (64%), Gaps = 14/442 (3%) Query: 22 AACPCSLQALAQSTPESLRHHRRILFIASTFGEGDAPDSARGFEKRLRQAAGQSLAHVHY 81 A P +Q L T + L R LFI STFG+G+APDSARGFE++L + +L ++Y Sbjct: 408 AGVPARVQRLGDVTVQDLCQSRNALFIVSTFGDGEAPDSARGFERKL-MGSPIALDTLNY 466 Query: 82 AILALGDRHYAQFCGFGHTLDHGLRQCGAKPLFPLVEVDRMAGVALRKWDTELAAHGLQA 141 A+LALGDR YA FCGF H L+ L + GA+ LF +EVDR+ AL++W +L L Sbjct: 467 AVLALGDRQYAHFCGFAHRLNDWLAERGARTLFAPIEVDRVDPAALQRWQQQLGQ--LTG 524 Query: 142 SVSELLPTTAPAWQQWKLTRRVLLNPGSQGAPLYHIEL-QPQDGSLPDWQAGALVEILPR 200 S + AP ++ W LTRR LNPGS G+ +Y ++L P S WQAG L E++PR Sbjct: 525 SAPQSGSWQAPVFENWTLTRREHLNPGSSGSKVYLLDLIAPASTS---WQAGDLAEVMPR 581 Query: 201 HAPDRIALLLQRLQLDGSAMVSHQGRQKTLADALACSVLPTHPVR----DAQALADQLQP 256 +A I L L +D V G +++L ALA LP + AQAL D L P Sbjct: 582 NAASAIEPFLDGLGIDPFTQVQVGGLRESLVQALATCQLPQNRAHLVGLHAQALVDALAP 641 Query: 257 LAARSYSVASVPQDGAVHLLVRQVRHEDG-LGLASGWLTEFAPDDASIDLRLVENAGFAP 315 L+AR YS+AS+P+DG + L+VRQ H DG LGL SGWLTE A D++I LR+ N+ F Sbjct: 642 LSAREYSIASIPEDGCLQLIVRQEVHPDGTLGLGSGWLTEHAALDSAISLRVRRNSSFHL 701 Query: 316 VAADTPAIFIGNGSGLAGLRGHLHARMQHGEANSRNWLLFGERNERYDFLYADELQDWLE 375 P I +GNG+GLAGLR L AR+ G+ RNWLLFGERN YDF A ELQ WLE Sbjct: 702 PVEPVPLILLGNGTGLAGLRSLLRARITQGQM--RNWLLFGERNRAYDFHCATELQSWLE 759 Query: 376 HGRLARLDLAFSRDQSERLYVQDRLREAGPELRQWLDQGAVIYVCGSLEGMAAGVDAVLT 435 GRL+RLDLAFSRDQ+E++YVQDRLRE ELR WLD GA IY+CGSL GMAAGVD VL Sbjct: 760 AGRLSRLDLAFSRDQAEKVYVQDRLRETADELRTWLDDGAAIYICGSLLGMAAGVDQVLK 819 Query: 436 DLLGEAGLHALIEQNRYRRDVY 457 D+LGE + LIEQ RYRRDVY Sbjct: 820 DVLGEQRVSELIEQGRYRRDVY 841 >ref|ZP_03543635.1| flavodoxin/nitric oxide synthase [Comamonas testosteroni KF-1] gb|EED67921.1| flavodoxin/nitric oxide synthase [Comamonas testosteroni KF-1] Length = 856 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 242/445 (54%), Positives = 295/445 (66%), Gaps = 12/445 (2%) Query: 22 AACPCSLQALAQSTPESLRHHRRILFIASTFGEGDAPDSARGFEKRLRQAAGQSLAHVHY 81 A +L+ +AQ E LRHH R LFIAS+FG+G+APD R F + L AA L +HY Sbjct: 415 AGLATTLKPMAQLDTEQLRHHGRALFIASSFGDGEAPDCTRRFARALDAAAANPLTTLHY 474 Query: 82 AILALGDRHYAQFCGFGHTLDHGLRQCGAKPLFPLVEVDRMAGVALRKWDTELAAHGLQA 141 +LALGDR Y +FCGFG LDH L++ A+P+FP +E+D G A W L+ H + Sbjct: 475 GLLALGDRQYTRFCGFGRALDHQLQRLSAQPIFPRIEMDGEDGKAWSAWQQMLSGH-FRT 533 Query: 142 SVSELLPTTAPAWQQWKLTRRVLLNPGSQGAPLYHIELQPQDGSLPDWQAGALVEILPRH 201 + APA+ W L R L+NPGS G PL+ + L P G DW+ GALVEI PRH Sbjct: 534 ARQLPDAPAAPAFAPWTLAERSLINPGSLGTPLHSLTLTPPAGLALDWRPGALVEICPRH 593 Query: 202 APDRIALLLQRLQLDGSAMVSHQGRQKTLADALACSVLPT----HPVRDAQALADQLQPL 257 AP IA LQ+ LDG+A+V QGR + L AL+ SVLP AQA+AD LQPL Sbjct: 594 APQTIAAWLQQQALDGNAVVRWQGRSQPLQAALSASVLPQPGDLSADASAQAVADALQPL 653 Query: 258 AARSYSVASVPQDGAVHLLVRQVRHEDGLGLASGWLTEFAPDDASIDLRLVENAGFAPV- 316 AARSYSVAS+P DG V LLVRQ RH+ GLGLASGWLT +A A++ LRLV+N FAPV Sbjct: 654 AARSYSVASLPADGHVRLLVRQARHDAGLGLASGWLTAYAAPGAALMLRLVDNRAFAPVD 713 Query: 317 ----AADTPAIFIGNGSGLAGLRGHLHARMQHGEANSRNWLLFGERNERYDFLYADELQD 372 +D PAIFIGNGSG AGLRGHL ARM+ G+ RNWLLFGER + +D E Sbjct: 714 DAAAPSDVPAIFIGNGSGYAGLRGHLLARMRAGQ--HRNWLLFGERQQAHDGYAQAEACA 771 Query: 373 WLEHGRLARLDLAFSRDQSERLYVQDRLREAGPELRQWLDQGAVIYVCGSLEGMAAGVDA 432 WL+ G+LAR D +SRDQ++R YVQD LR+A LR W+D+GAVI++CGSL+GMAAGVD Sbjct: 772 WLQAGQLARADFVYSRDQAQRRYVQDGLRDAADLLRGWIDEGAVIFICGSLQGMAAGVDT 831 Query: 433 VLTDLLGEAGLHALIEQNRYRRDVY 457 VL +LLG L LI Q RYRRDVY Sbjct: 832 VLQELLGRDPLDELIAQGRYRRDVY 856