BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3060.p (524 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774538.1| sulfite reductase, flavoprotein component [H... 648 0.0 gb|ABK64008.1| putative oxidoreductase [Janthinobacterium lividum] 402 e-110 ref|YP_004485869.1| flavodoxin/nitric oxide synthase [Delftia sp... 383 e-104 ref|ZP_03543635.1| flavodoxin/nitric oxide synthase [Comamonas t... 379 e-103 ref|YP_001561561.1| flavodoxin/nitric oxide synthase [Delftia ac... 378 e-102 >ref|YP_003774538.1| sulfite reductase, flavoprotein component [Herbaspirillum seropedicae SmR1] gb|ADJ62630.1| sulfite reductase, flavoprotein component, protein [Herbaspirillum seropedicae SmR1] Length = 850 Score = 648 bits (1672), Expect = 0.0, Method: Composition-based stats. Identities = 353/420 (84%), Positives = 379/420 (90%), Gaps = 3/420 (0%) Query: 1 MFKKIWFQLHWFIGITAGTLLMTIGVTGAVLAFREEIMEALSPGVMHVQVRQQATLTPQQ 60 MFKKIWFQLHWFIGITAGT+LMTIGVTGA+LAFREEIM+ LSPGVMHVQVRQQATLTPQQ Sbjct: 1 MFKKIWFQLHWFIGITAGTVLMTIGVTGALLAFREEIMDLLSPGVMHVQVRQQATLTPQQ 60 Query: 61 LLDKLREAEPARRVTTLTLTSEPGASARVVFAPPPGVRRGEVRYADPYTGALLPPVTGAE 120 +L+KLR+ EP RR+TT+TL++EPG S RVVFAPPPG RRG+ RY DPYTGALLPPVTG E Sbjct: 61 VLEKLRQEEPQRRITTMTLSAEPGDSVRVVFAPPPGERRGQARYVDPYTGALLPPVTGME 120 Query: 121 FFEFIEHFHRWLLLPTEIGKIVLGTLALALLMLALSGLYLRWPRRPLSLRAWLRLDFQLQ 180 FFEF E FHRWLLLPTEIGKIVLGTLAL LLMLALSGLYLRWPRR LSLRAWLRLDFQLQ Sbjct: 121 FFEFTERFHRWLLLPTEIGKIVLGTLALCLLMLALSGLYLRWPRRALSLRAWLRLDFQLQ 180 Query: 181 GRSFLWNLHSVIGTWSLVMYVVFSITGAYWALDWFKDGLNTLAGESRRPAMQRGEGKKK- 239 GRS LWNLHSVIGTWSLVMYV+F+ TGAYWALDWFKDG+NTLAGE+RR M RGEGKKK Sbjct: 181 GRSLLWNLHSVIGTWSLVMYVIFATTGAYWALDWFKDGVNTLAGETRRAPMARGEGKKKD 240 Query: 240 -PATDEAIPLELTQAWNSFLAKAPDYQSAQLRLPEQGSQPVQIFFLDHGAPHERARSRMV 298 P + L+LTQAWN+FL KAPDYQSAQLRLPEQG+QP+QIFFL H APHERARSRMV Sbjct: 241 GPNNQTPVALDLTQAWNAFLTKAPDYQSAQLRLPEQGTQPLQIFFLGHDAPHERARSRMV 300 Query: 299 VLPQSGEIRQLERYEDKSNGGKLIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGITGWM 358 VLPQSGEI+QLERYEDKS GG+ IAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGITGWM Sbjct: 301 VLPQSGEIKQLERYEDKSTGGRFIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGITGWM 360 Query: 359 LYLDRRRKKAALRAERASLNGTAPAPEGEPILVAYASQTGQAERIALHTAAGLRRSGLSV 418 LYLDRRRKKAALRAERA+L G G +LVAYASQTGQAERIALHTAA LRRSG++V Sbjct: 361 LYLDRRRKKAALRAERAAL-GEPQQQAGGQLLVAYASQTGQAERIALHTAARLRRSGVAV 419 >gb|ABK64008.1| putative oxidoreductase [Janthinobacterium lividum] Length = 845 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 225/423 (53%), Positives = 295/423 (69%), Gaps = 5/423 (1%) Query: 2 FKKIWFQLHWFIGITAGTLLMTIGVTGAVLAFREEIMEALSPGVMHVQVRQQATLTPQQL 61 +K++WFQLHWFIGITAGT+L+ IG++GA LAF+EE+++ ++PGV HV V +A LTP QL Sbjct: 40 WKQVWFQLHWFIGITAGTVLVIIGLSGATLAFKEELLDVMNPGVRHVPVETRAPLTPAQL 99 Query: 62 LDKLREAEPARRVTTLTLTSEPGASARVVFAPPPGVRRGEVRYADPYTGALLPPVTGAEF 121 + + AE +RV ++T+ ++ GA+ RV FAP G RRGE Y PYTGA P + GA F Sbjct: 100 AN-IAAAEHGQRVASVTMYADAGAAPRVFFAPKNGQRRGESIYVHPYTGATQPALMGAGF 158 Query: 122 FEFIEHFHRWLLLPTEIGKIVLGTLALALLMLALSGLYLRWPRRPLSLRAWLRLDFQLQG 181 FE+ E HRWLLLP + G+ V G LAL LL LA SGLYLRWPRRPL R WL D L+G Sbjct: 159 FEWTESLHRWLLLPRDPGRQVAGALALCLLGLAFSGLYLRWPRRPLDWRTWLTFDPALKG 218 Query: 182 RSFLWNLHSVIGTWSLVMYVVFSITGAYWALDWFKDGLNTLAGESRRPAMQRGEGKKKPA 241 RSFLWNLH+V GTW LV+YV ++TG YW+ D +D ++ AG + P M + KK PA Sbjct: 219 RSFLWNLHAVAGTWCLVVYVALTLTGIYWSYDVVRDSIDAWAG--KPPRMAQAPAKKGPA 276 Query: 242 TDEAIPLELTQAWNSFLAKAPDYQSAQLRLPEQGSQPVQIFFLDHGAPHERARSRMVVLP 301 D A ++L+ AW+SF AP + A +RLP + + VQ +L APHERARSRM +LP Sbjct: 277 KDHAPAVDLSLAWSSFQQHAPGWTLASVRLPVRTGEAVQFTWLASDAPHERARSRMSILP 336 Query: 302 QSGEIRQLERYEDKSNGGKLIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGITGWMLYL 361 G + + E Y ++ G +L+ IYPLHMGTYFGLPGRII+ +ASL +PLF ITGWMLYL Sbjct: 337 ADGTLTENEPYSQQALGARLVNIIYPLHMGTYFGLPGRIIVTVASLGLPLFAITGWMLYL 396 Query: 362 DRRRKKAALRAERASLNGTA--PAPEGEPILVAYASQTGQAERIALHTAAGLRRSGLSVQ 419 RR+ K A++A+R L A A G P L+AYASQ+GQAER+AL +A L+++G++V Sbjct: 397 GRRKAKRAVQAQRVLLGAGALGKANTGLPTLLAYASQSGQAERLALESARALQQAGVAVD 456 Query: 420 PAS 422 S Sbjct: 457 VQS 459 >ref|YP_004485869.1| flavodoxin/nitric oxide synthase [Delftia sp. Cs1-4] gb|AEF87514.1| flavodoxin/nitric oxide synthase [Delftia sp. Cs1-4] Length = 872 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 232/439 (52%), Positives = 294/439 (66%), Gaps = 11/439 (2%) Query: 2 FKKIWFQLHWFIGITAGTLLMTIGVTGAVLAFREEIMEALSPGVMHVQVRQQATLTPQQL 61 FKKIWFQLHWF+GITAGT+L+ IG++GAV +F EEI+ ++PG V R A L P Q+ Sbjct: 3 FKKIWFQLHWFVGITAGTVLIVIGLSGAVFSFHEEILGWMNPGTASVPARDAAPLAPPQI 62 Query: 62 LDKLREAEPARRVTTLTLTSEPGASARVVFAPPPGVRRGEVRYADPYTGALLPPVTGAEF 121 L EA R V +T+ +EPG SA+V F PP G RRG+ + DPYTGA LP G EF Sbjct: 63 AQALHEAGEQRVVQRITVFAEPGRSAQVAFKPPAGQRRGQTVFVDPYTGAQLPEQHGTEF 122 Query: 122 FEFIEHFHRWLLLPTEIGKIVLGTLALALLMLALSGLYLRWPRRPLSLRAWLRLDFQLQG 181 FE++E HRWLLL + GK + GTLA LLML+LSGLYLRWPRRPLS R WL D L+G Sbjct: 123 FEWVERLHRWLLLSRDDGKPITGTLAGLLLMLSLSGLYLRWPRRPLSWRTWLTFDPALKG 182 Query: 182 RSFLWNLHSVIGTWSLVMYVVFSITGAYWALDWFKDGLNTLAG------ESRRPAMQRGE 235 RSFLW LHSV GTW+LV YVVF+ TG YWA + ++ AG S P+ + G Sbjct: 183 RSFLWGLHSVAGTWALVAYVVFTCTGMYWAFGVVRSTVDGWAGVPPRVAASAAPSPKSGG 242 Query: 236 GKKKPATDEAIPLELTQAWNSFLAKAPDYQSAQLRLPEQGSQPVQIFFLDHGAPHERARS 295 G+ +PA + P+++ W +F A +Q AQLRLPE+ QP+QI +LD A HERAR+ Sbjct: 243 GRPEPAGAQQ-PIDIAPGWAAFERIAHGWQFAQLRLPERAGQPLQISWLDADAAHERARN 301 Query: 296 RMVVLPQSGEIRQLERYEDKSNGGKLIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGIT 355 +M +LP G +++ ERY D G + + AIYPLHMGTYFG+PGRI M +ASL+MPLF IT Sbjct: 302 QMALLP-DGAVQRDERYADLPTGRRAVGAIYPLHMGTYFGMPGRIFMTLASLIMPLFAIT 360 Query: 356 GWMLYLDRRRKKAALRAERASLNGTAP--APEGE-PILVAYASQTGQAERIALHTAAGLR 412 GWMLYLDRRRK L ER +L P AP G+ +LVA+ASQ G+AER+A+ T A LR Sbjct: 361 GWMLYLDRRRKARVLAKERQALMADPPPSAPAGQDTVLVAFASQAGRAERLAVATVAALR 420 Query: 413 RSGLSVQPASAGTEHAGEL 431 +G++ S A +L Sbjct: 421 GAGMAASLQSVAALDAEQL 439 >ref|ZP_03543635.1| flavodoxin/nitric oxide synthase [Comamonas testosteroni KF-1] gb|EED67921.1| flavodoxin/nitric oxide synthase [Comamonas testosteroni KF-1] Length = 856 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 229/419 (54%), Positives = 296/419 (70%), Gaps = 7/419 (1%) Query: 2 FKKIWFQLHWFIGITAGTLLMTIGVTGAVLAFREEIMEALSPGVMHVQVRQ-QATLTPQQ 60 FK++WFQLHWF+GITAGT+L+ +G++GAV +F EEI++ L+PG VQ R QA +TP Q Sbjct: 4 FKQLWFQLHWFVGITAGTVLIVLGLSGAVFSFHEEILDWLNPGTARVQARSDQAPMTPAQ 63 Query: 61 LLDKLREAEPARRVTTLTLTSEPGASARVVFAPPPGVRRGEVRYADPYTGALLPPVTGAE 120 LL LR R V +T+ SE G SA++ F P G RRGE + +PYT A LPP GA+ Sbjct: 64 LLQTLRAQGEERVVQRITVHSEAGRSAQISFKPLKGQRRGETVFVNPYTAAQLPPQKGAQ 123 Query: 121 FFEFIEHFHRWLLLPTEIGKIVLGTLALALLMLALSGLYLRWPRRPLSLRAWLRLDFQLQ 180 FFE+ + HRWLLL + GK + GTLA L++L+LSGLYLRWPR+P+ R+WL LD +L+ Sbjct: 124 FFEWAQRLHRWLLLSRDDGKPITGTLAGLLVLLSLSGLYLRWPRKPMEWRSWLWLDMRLK 183 Query: 181 GRSFLWNLHSVIGTWSLVMYVVFSITGAYWALDWFKDGLNTLAGESRRPAMQRGEGKKKP 240 GRSFLWNLH+V GT +L++Y+V + TG YWA D + ++T AG R A KP Sbjct: 184 GRSFLWNLHAVAGTLALLVYLVLAPTGMYWAFDGLRRTVDTWAGVPPRAA---AATSAKP 240 Query: 241 ATDEAIPL-ELTQAWNSFLAKAPDYQSAQLRLPEQGSQPVQIFFLDHGAPHERARSRMVV 299 + A P +LT AW SF AP +Q AQLRLPE+ PVQI + D A HERAR+++ + Sbjct: 241 GREPAEPTPDLTSAWQSFQHLAPGWQFAQLRLPERTGAPVQIAWFDETAAHERARNQLRL 300 Query: 300 LPQSGEIRQLERYEDKSNGGKLIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGITGWML 359 P+ G ++Q ERY D G + + AIYPLHMGTYFGLPGRII+ +A+LMMPLF ITGW+L Sbjct: 301 TPE-GRVQQDERYADLPVGRRAVGAIYPLHMGTYFGLPGRIIVTLAALMMPLFAITGWLL 359 Query: 360 YLDRRRKKAALRAERASLNGTAPAPEGE-PILVAYASQTGQAERIALHTAAGLRRSGLS 417 YLDRRRK AL ER + G++PA +G+ ILVAYASQTG AER+AL TAA LR +GL+ Sbjct: 360 YLDRRRKTRALNGERRAWAGSSPAGQGQDSILVAYASQTGHAERLALRTAAALRDAGLA 418 >ref|YP_001561561.1| flavodoxin/nitric oxide synthase [Delftia acidovorans SPH-1] gb|ABX33176.1| flavodoxin/nitric oxide synthase [Delftia acidovorans SPH-1] Length = 885 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 232/439 (52%), Positives = 294/439 (66%), Gaps = 11/439 (2%) Query: 2 FKKIWFQLHWFIGITAGTLLMTIGVTGAVLAFREEIMEALSPGVMHVQVRQQATLTPQQL 61 FKKIWFQLHWF+GITAGT+L+ IG++GAV +F EEI+ ++PG V R A L P Q+ Sbjct: 16 FKKIWFQLHWFVGITAGTVLIVIGLSGAVFSFHEEILGWMNPGTASVPARNAAPLAPPQV 75 Query: 62 LDKLREAEPARRVTTLTLTSEPGASARVVFAPPPGVRRGEVRYADPYTGALLPPVTGAEF 121 LREA R V +T+ +EPG SA+V F PP G RRG+ + DPYTGA LP G EF Sbjct: 76 AQALREAGEQRVVQRITVFAEPGRSAQVAFKPPAGQRRGQTVFVDPYTGAQLPEQHGTEF 135 Query: 122 FEFIEHFHRWLLLPTEIGKIVLGTLALALLMLALSGLYLRWPRRPLSLRAWLRLDFQLQG 181 FE++E HRWLLL + GK + GTLA LLML+LSGLYLRWPRRPLS R WL D L+G Sbjct: 136 FEWVERLHRWLLLSRDDGKPITGTLAGLLLMLSLSGLYLRWPRRPLSWRTWLTFDPALKG 195 Query: 182 RSFLWNLHSVIGTWSLVMYVVFSITGAYWALDWFKDGLNTLAG------ESRRPAMQRGE 235 RSFLW LHSV GTW+LV YVVF+ TG YWA + ++ AG P+ + G Sbjct: 196 RSFLWGLHSVAGTWALVAYVVFTCTGMYWAFGVVRSTVDGWAGVPPRVAAPAAPSSKTGG 255 Query: 236 GKKKPATDEAIPLELTQAWNSFLAKAPDYQSAQLRLPEQGSQPVQIFFLDHGAPHERARS 295 G+ +PA + P+++ W +F A +Q AQLRLPE+ QP+QI +LD A HERAR+ Sbjct: 256 GRPEPAGAQQ-PIDIAPGWAAFERIAHGWQFAQLRLPERAGQPLQISWLDAEAAHERARN 314 Query: 296 RMVVLPQSGEIRQLERYEDKSNGGKLIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGIT 355 +M +LP G +++ ERY G + + AIYPLHMGTYFG+PGRI M +ASL+MPLF IT Sbjct: 315 QMALLP-DGTVQRDERYAGLPTGRRAVGAIYPLHMGTYFGMPGRIFMTLASLIMPLFAIT 373 Query: 356 GWMLYLDRRRKKAALRAERASLNGTAP--APEGE-PILVAYASQTGQAERIALHTAAGLR 412 GWMLYLDRRRK AL ER +L P AP G+ +LVA+ASQ G+AER+A+ T A LR Sbjct: 374 GWMLYLDRRRKARALAKERQALMKEPPPSAPAGQDTVLVAFASQAGRAERLAVATVAALR 433 Query: 413 RSGLSVQPASAGTEHAGEL 431 +G++ S A +L Sbjct: 434 GAGMAASLQSVAALDAEQL 452