BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3053.p (170 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774545.1| acyl dehydratase [Herbaspirillum seropedicae... 313 6e-84 ref|YP_002495401.1| MaoC domain-containing protein dehydratase [... 181 3e-44 ref|YP_726206.1| acyl dehydratase [Ralstonia eutropha H16] >gi|1... 175 2e-42 ref|YP_004681905.1| ketopantoate reductase ApbA [Cupriavidus nec... 175 2e-42 ref|YP_001630802.1| hypothetical protein Bpet2193 [Bordetella pe... 168 3e-40 >ref|YP_003774545.1| acyl dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ62637.1| acyl dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 170 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 157/170 (92%), Positives = 164/170 (96%) Query: 1 MQPIVAHRSGIDNSDQGEHVEQPNYLDDFQPGQVFRSPGTLTVHSADIKAFAAQFDPQPF 60 MQPIVAHRSGIDNSDQGEHVEQP YLDDFQPGQVFRSPG+LTVHSADIKAFAAQFDPQPF Sbjct: 1 MQPIVAHRSGIDNSDQGEHVEQPKYLDDFQPGQVFRSPGSLTVHSADIKAFAAQFDPQPF 60 Query: 61 HLDDAAAQQTFFRGLAASGWHTAALTMRLLVDTLHIHGGIIGAGFDEFRWPRPTRPGDVL 120 HLD+AAAQQTFF+GLAASGWHTAALTMRLLVDTL+I GG+IGAGFDEFRWPRPTRPGD L Sbjct: 61 HLDEAAAQQTFFKGLAASGWHTAALTMRLLVDTLNIEGGLIGAGFDEFRWPRPTRPGDTL 120 Query: 121 RLEAEVLGIKTSQSKPQQGFLNHRVTTYNQHDEAVLIMTGNLLVPRRSPG 170 RL+AEVLGIKTSQSKP QGFL+HRVTTYNQHDE VLIMTGNLLVPRRS G Sbjct: 121 RLDAEVLGIKTSQSKPLQGFLHHRVTTYNQHDEPVLIMTGNLLVPRRSQG 170 >ref|YP_002495401.1| MaoC domain-containing protein dehydratase [Methylobacterium nodulans ORS 2060] gb|ACL55098.1| MaoC domain protein dehydratase [Methylobacterium nodulans ORS 2060] Length = 152 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 89/147 (60%), Positives = 112/147 (76%), Gaps = 2/147 (1%) Query: 25 YLDDFQPGQVFRSPGTLTVHSADIKAFAAQFDPQPFHLDDAAAQQTFFRGLAASGWHTAA 84 YL+D PGQ++RS G LTV + IK FAA++DPQPFHLD+A A+ +FF GLAASGWHTAA Sbjct: 5 YLEDLAPGQIYRS-GELTVSAEAIKRFAAEYDPQPFHLDEARAEASFFGGLAASGWHTAA 63 Query: 85 LTMRLLVDT-LHIHGGIIGAGFDEFRWPRPTRPGDVLRLEAEVLGIKTSQSKPQQGFLNH 143 LTMRLLV++ L + GG+IGAG DE RWPRP RPG+ +RLE+EVL ++ S+S+P QG Sbjct: 64 LTMRLLVESGLPLAGGVIGAGMDELRWPRPLRPGETIRLESEVLEVRPSRSRPMQGLAKV 123 Query: 144 RVTTYNQHDEAVLIMTGNLLVPRRSPG 170 R TT NQ E V ++ NL+V RR PG Sbjct: 124 RTTTLNQQGEPVQVLVANLVVLRREPG 150 >ref|YP_726206.1| acyl dehydratase [Ralstonia eutropha H16] ref|YP_841282.1| hypothetical protein H16_B1770 [Ralstonia eutropha H16] emb|CAJ92838.1| predicted acyl dehydratase [Ralstonia eutropha H16] emb|CAJ96552.1| Hypothetical protein H16_B1770 [Ralstonia eutropha H16] Length = 157 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 89/144 (61%), Positives = 108/144 (75%), Gaps = 2/144 (1%) Query: 25 YLDDFQPGQVFRSPGTLTVHSADIKAFAAQFDPQPFHLDDAAAQQTFFRGLAASGWHTAA 84 Y++D GQ + S G LTV IKAFAA+FDPQPFHLD+AAA+ T FRGLAASGWHTAA Sbjct: 5 YIEDLAAGQRYGS-GRLTVAPERIKAFAAEFDPQPFHLDEAAARDTLFRGLAASGWHTAA 63 Query: 85 LTMRLLVD-TLHIHGGIIGAGFDEFRWPRPTRPGDVLRLEAEVLGIKTSQSKPQQGFLNH 143 LTMRLLVD GGI+GAGF+E RWPRP RPGD L +E+E+L ++ S+S+P QG + Sbjct: 64 LTMRLLVDGEFRPAGGIVGAGFEELRWPRPVRPGDELHIESEILEVRISKSRPDQGVVKV 123 Query: 144 RVTTYNQHDEAVLIMTGNLLVPRR 167 R TT+NQ DE V + TGNL+V R Sbjct: 124 RTTTFNQADEPVQVFTGNLIVQCR 147 >ref|YP_004681905.1| ketopantoate reductase ApbA [Cupriavidus necator N-1] gb|AEI80673.1| acyl dehydratase [Cupriavidus necator N-1] Length = 157 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 88/144 (61%), Positives = 108/144 (75%), Gaps = 2/144 (1%) Query: 25 YLDDFQPGQVFRSPGTLTVHSADIKAFAAQFDPQPFHLDDAAAQQTFFRGLAASGWHTAA 84 Y++D PGQ + S G LTV IKAFAA+FDPQPFHLD+AAA+ T FRGLAASGWHTAA Sbjct: 5 YIEDLAPGQKYGS-GRLTVEPERIKAFAAEFDPQPFHLDEAAARDTLFRGLAASGWHTAA 63 Query: 85 LTMRLLVD-TLHIHGGIIGAGFDEFRWPRPTRPGDVLRLEAEVLGIKTSQSKPQQGFLNH 143 LTMRLLVD GGI+GAGF+E RWP+P RPGD L +E+E+L ++ S+S+P QG + Sbjct: 64 LTMRLLVDGEFRPAGGILGAGFEELRWPKPVRPGDELHIESEILEVRISKSRPDQGIVKV 123 Query: 144 RVTTYNQHDEAVLIMTGNLLVPRR 167 R TT+NQ E V + T NL+V RR Sbjct: 124 RTTTFNQAGEPVQVFTANLIVQRR 147 >ref|YP_001630802.1| hypothetical protein Bpet2193 [Bordetella petrii DSM 12804] emb|CAP42534.1| conserved hypothetical protein [Bordetella petrii] Length = 155 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 83/147 (56%), Positives = 104/147 (70%), Gaps = 2/147 (1%) Query: 25 YLDDFQPGQVFRSPGTLTVHSADIKAFAAQFDPQPFHLDDAAAQQTFFRGLAASGWHTAA 84 YL+D GQ + + V +K+FA +FDPQPFHLD+ AA + FRGLAASGWHTAA Sbjct: 5 YLEDLAAGQRYAGSTRIRVEENRLKSFATEFDPQPFHLDETAASSSIFRGLAASGWHTAA 64 Query: 85 LTMRLLVDT-LHIHGGIIGAGFDEFRWPRPTRPGDVLRLEAEVLGIKTSQSKPQQGFLNH 143 +TMRLLVD+ GGI+GAGFDE RWP P RPGD LR+E+EVL ++ S+S+P+QG Sbjct: 65 ITMRLLVDSEFKPAGGIVGAGFDELRWPLPVRPGDELRVESEVLEVRPSKSRPEQGIAKV 124 Query: 144 RVTTYNQHDEAVLIMTGNLLVPRRSPG 170 R TT NQ + V + GNL+VPRR PG Sbjct: 125 RTTTLNQDGKTVQVSVGNLVVPRR-PG 150