BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3049.p         (164 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774547.1| AsnC family transcription regulator protein ...   317   3e-85
ref|YP_004750971.1| AsnC family transcriptional regulator [Colli...   316   8e-85
ref|ZP_03264261.1| transcriptional regulator, AsnC family [Burkh...   257   4e-67
ref|YP_555950.1| AsnC family transcriptional regulator [Burkhold...   253   5e-66
ref|ZP_04948765.1| AsnC-family transcriptional regulator [Burkho...   253   6e-66

>ref|YP_003774547.1| AsnC family transcription regulator protein [Herbaspirillum
           seropedicae SmR1]
 gb|ADJ62639.1| AsnC family transcription regulator protein [Herbaspirillum
           seropedicae SmR1]
          Length = 164

 Score =  317 bits (812), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 161/164 (98%), Positives = 164/164 (100%)

Query: 1   MMTNGALKLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGA 60
           MMTNGALKLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGA
Sbjct: 1   MMTNGALKLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGA 60

Query: 61  YIRLEKLADVQIVFTEVTLSDHRREDFAKFEATIRNVDEIIECHLVSGGYDYLLKFMTRS 120
           YIRLEKLADVQIVFTEVTLSDHRREDFAKFE+TIRNVDEIIECHLVSGGYDYLLKFMTRS
Sbjct: 61  YIRLEKLADVQIVFTEVTLSDHRREDFAKFESTIRNVDEIIECHLVSGGYDYLLKFMTRS 120

Query: 121 VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFIKHHYPLEKFIQT 164
           VVHYQSVIESLLEQNLRIEKYFSYIVIKSPF+KHHYPLEKFIQ+
Sbjct: 121 VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFVKHHYPLEKFIQS 164


>ref|YP_004750971.1| AsnC family transcriptional regulator [Collimonas fungivorans
           Ter331]
 gb|AEK60148.1| Transcriptional regulator, AsnC family [Collimonas fungivorans
           Ter331]
          Length = 164

 Score =  316 bits (809), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 161/164 (98%), Positives = 163/164 (99%)

Query: 1   MMTNGALKLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGA 60
           MMTNGALKLDRIDLRILCHLQQNSRITNV+LADAVGLSPSPCLIRVKRLEKAGYISGYGA
Sbjct: 1   MMTNGALKLDRIDLRILCHLQQNSRITNVVLADAVGLSPSPCLIRVKRLEKAGYISGYGA 60

Query: 61  YIRLEKLADVQIVFTEVTLSDHRREDFAKFEATIRNVDEIIECHLVSGGYDYLLKFMTRS 120
           YIRLEKLADVQIVFTEVTLSDHRREDFAKFEA +RNVDEIIECHLVSGGYDYLLKFMTRS
Sbjct: 61  YIRLEKLADVQIVFTEVTLSDHRREDFAKFEAYLRNVDEIIECHLVSGGYDYLLKFMTRS 120

Query: 121 VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFIKHHYPLEKFIQT 164
           VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFIKHHYPLEKFIQT
Sbjct: 121 VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFIKHHYPLEKFIQT 164


>ref|ZP_03264261.1| transcriptional regulator, AsnC family [Burkholderia sp. H160]
 gb|EEA04105.1| transcriptional regulator, AsnC family [Burkholderia sp. H160]
          Length = 167

 Score =  257 bits (656), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 128/161 (79%), Positives = 142/161 (88%)

Query: 1   MMTNGALKLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGA 60
           M T+G  KLDRIDLRIL  LQ+  RITNV LADAVGLSPSPCLIRVKRLEKAGYI GYGA
Sbjct: 1   MTTSGDTKLDRIDLRILSQLQKKGRITNVELADAVGLSPSPCLIRVKRLEKAGYIVGYGA 60

Query: 61  YIRLEKLADVQIVFTEVTLSDHRREDFAKFEATIRNVDEIIECHLVSGGYDYLLKFMTRS 120
           +I+L+KL DVQIVFTEVTL+DHRREDFAKFEA IR VDEIIECHL SGGYDYLLKF+TRS
Sbjct: 61  HIQLQKLGDVQIVFTEVTLADHRREDFAKFEAAIRPVDEIIECHLASGGYDYLLKFVTRS 120

Query: 121 VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFIKHHYPLEKF 161
           V HYQSVIE LLE+++ IEKYFSY++IK+PF+K  YPLEK 
Sbjct: 121 VNHYQSVIEGLLERDIGIEKYFSYVIIKTPFVKSEYPLEKL 161


>ref|YP_555950.1| AsnC family transcriptional regulator [Burkholderia xenovorans
           LB400]
 gb|ABE36600.1| transcriptional regulator, AsnC family [Burkholderia xenovorans
           LB400]
          Length = 167

 Score =  253 bits (647), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 125/159 (78%), Positives = 140/159 (88%)

Query: 1   MMTNGALKLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGA 60
           M T+G  KLDRIDLRIL  LQ+  RITNV LADAVGLSPSPCLIRVKRLEKAGYI GYGA
Sbjct: 1   MTTSGDTKLDRIDLRILSQLQKKGRITNVELADAVGLSPSPCLIRVKRLEKAGYIVGYGA 60

Query: 61  YIRLEKLADVQIVFTEVTLSDHRREDFAKFEATIRNVDEIIECHLVSGGYDYLLKFMTRS 120
           +I+L+KL DVQIVF EVTL+DHRREDFAKFEA IR VDEI+ECHL SGGYDYLLKF+TRS
Sbjct: 61  HIQLQKLGDVQIVFAEVTLADHRREDFAKFEAAIRPVDEIVECHLASGGYDYLLKFVTRS 120

Query: 121 VVHYQSVIESLLEQNLRIEKYFSYIVIKSPFIKHHYPLE 159
           V HYQSVIE LLE+++ IEKYFSY++IK+PF+K  YPLE
Sbjct: 121 VNHYQSVIEGLLERDIGIEKYFSYVIIKTPFVKSEYPLE 159


>ref|ZP_04948765.1| AsnC-family transcriptional regulator [Burkholderia dolosa AUO158]
 gb|EAY71936.1| AsnC-family transcriptional regulator [Burkholderia dolosa AUO158]
          Length = 165

 Score =  253 bits (646), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 121/154 (78%), Positives = 138/154 (89%)

Query: 8   KLDRIDLRILCHLQQNSRITNVILADAVGLSPSPCLIRVKRLEKAGYISGYGAYIRLEKL 67
           KLDRIDLRIL  LQ+  R+TNV LADAVGLSPSPCLIRVKRLEKAGYI+GYGA+I+LEKL
Sbjct: 7   KLDRIDLRILSQLQKRGRMTNVELADAVGLSPSPCLIRVKRLEKAGYIAGYGAHIQLEKL 66

Query: 68  ADVQIVFTEVTLSDHRREDFAKFEATIRNVDEIIECHLVSGGYDYLLKFMTRSVVHYQSV 127
            DVQ+VFTEVTL+DHRREDF +F A IRNVDEI+ECHL SGGYDYLLKF+TRSV HYQ++
Sbjct: 67  GDVQVVFTEVTLADHRREDFDRFVAAIRNVDEIVECHLASGGYDYLLKFVTRSVSHYQTI 126

Query: 128 IESLLEQNLRIEKYFSYIVIKSPFIKHHYPLEKF 161
           +E LLEQN+ IEKYFSY++IKSPF+K HYPLE  
Sbjct: 127 VEGLLEQNIGIEKYFSYVIIKSPFVKRHYPLESL 160