BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3042.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774554.1| HAD superfamily haloalkanoic acid dehalogena... 454 e-126 ref|YP_004750979.1| Haloacid dehalogenase, type II [Collimonas f... 439 e-121 ref|YP_546921.1| haloacid dehalogenase [Polaromonas sp. JS666] >... 335 4e-90 ref|YP_002822840.1| hydrolase [Sinorhizobium fredii NGR234] >gi|... 331 5e-89 ref|YP_002541869.1| haloacid dehalogenase, type II [Agrobacteriu... 330 8e-89 >ref|YP_003774554.1| HAD superfamily haloalkanoic acid dehalogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62646.1| HAD superfamily haloalkanoic acid dehalogenase protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 454 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 215/222 (96%), Positives = 218/222 (98%) Query: 1 MSIFKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKP 60 MS FKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKP Sbjct: 1 MSTFKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKP 60 Query: 61 YEQVCKNAITRTCARWGIKTTDEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNA 120 YEQVCKNAITRTCARWGI+T DEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNA Sbjct: 61 YEQVCKNAITRTCARWGIQTNDEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNA 120 Query: 121 DDSQIMHNVEQLGAPFHKVFTAQQAQAYKPRLSAFEYMLDNLNCNPEDVLHVSSSLRYDL 180 DDSQIMHNVEQLGA FHKVFTAQQAQAYKPRL AFEYMLDNLNCNPEDVLHVSSSLRYDL Sbjct: 121 DDSQIMHNVEQLGAAFHKVFTAQQAQAYKPRLRAFEYMLDNLNCNPEDVLHVSSSLRYDL 180 Query: 181 MPASDMGIKNKVFVARGHEPSTPYYGYTEIKDISGLPGVLGL 222 MPA+DMGIKNKVFVARGHEPSTP+YGYTEIKDISGLPGVLGL Sbjct: 181 MPAADMGIKNKVFVARGHEPSTPFYGYTEIKDISGLPGVLGL 222 >ref|YP_004750979.1| Haloacid dehalogenase, type II [Collimonas fungivorans Ter331] gb|AEK60156.1| Haloacid dehalogenase, type II [Collimonas fungivorans Ter331] Length = 345 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 201/222 (90%), Positives = 210/222 (94%) Query: 1 MSIFKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKP 60 MS FKPKFITFDCYGTLTRFQM+ETA+K+YADRV+ DMPFFLRQFAAYRLDEVLDQWKP Sbjct: 124 MSTFKPKFITFDCYGTLTRFQMAETAKKLYADRVAEADMPFFLRQFAAYRLDEVLDQWKP 183 Query: 61 YEQVCKNAITRTCARWGIKTTDEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNA 120 YEQVCKNAI RTC RWG+KTTDEE G FYKAVPTWGPH DVPA L+KVAKE PLVIFSNA Sbjct: 184 YEQVCKNAIRRTCERWGVKTTDEEMGTFYKAVPTWGPHPDVPAALAKVAKEIPLVIFSNA 243 Query: 121 DDSQIMHNVEQLGAPFHKVFTAQQAQAYKPRLSAFEYMLDNLNCNPEDVLHVSSSLRYDL 180 DDSQIMHNVEQLGAPFHKVFTAQQAQAYKPRL AFEYMLDNLNCNPE+VLHVSSSLRYDL Sbjct: 244 DDSQIMHNVEQLGAPFHKVFTAQQAQAYKPRLRAFEYMLDNLNCNPEEVLHVSSSLRYDL 303 Query: 181 MPASDMGIKNKVFVARGHEPSTPYYGYTEIKDISGLPGVLGL 222 MPASDMGIKNKVFVARGHEPSTPYYGYTEI D+SGLPGV+GL Sbjct: 304 MPASDMGIKNKVFVARGHEPSTPYYGYTEISDLSGLPGVVGL 345 >ref|YP_546921.1| haloacid dehalogenase [Polaromonas sp. JS666] gb|ABE42023.1| haloacid dehalogenase, type II [Polaromonas sp. JS666] Length = 221 Score = 335 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 150/219 (68%), Positives = 175/219 (79%) Query: 4 FKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKPYEQ 63 F+PKFITFDCYGTLTRF+M + A++++ADR+ A M F+ F+AYR DEVL WKPY Sbjct: 3 FRPKFITFDCYGTLTRFRMGDMAREMFADRIPAAQMELFVADFSAYRFDEVLGAWKPYAD 62 Query: 64 VCKNAITRTCARWGIKTTDEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNADDS 123 V +NA+ RTC +W IK TD E A+Y AVPTWGPHADVPAGLS++A + PLVI SNA + Sbjct: 63 VLRNALNRTCKKWNIKCTDAEGRAYYDAVPTWGPHADVPAGLSRIADKIPLVILSNASND 122 Query: 124 QIMHNVEQLGAPFHKVFTAQQAQAYKPRLSAFEYMLDNLNCNPEDVLHVSSSLRYDLMPA 183 QI NV++LGAPFH+VFTAQQAQAYKPRL AFEYMLD L C PED+LHVSSSLRYDLM A Sbjct: 123 QIHKNVDKLGAPFHRVFTAQQAQAYKPRLQAFEYMLDQLGCGPEDILHVSSSLRYDLMSA 182 Query: 184 SDMGIKNKVFVARGHEPSTPYYGYTEIKDISGLPGVLGL 222 D+GIKNKVFV RGH P P Y Y EI+DI GLPGV+GL Sbjct: 183 DDLGIKNKVFVNRGHGPGNPAYNYVEIQDIGGLPGVVGL 221 >ref|YP_002822840.1| hydrolase [Sinorhizobium fredii NGR234] gb|AAQ87553.1| 2-haloacid halidohydrolase IVa [Sinorhizobium fredii NGR234] gb|ACP22087.1| putative hydrolase [Sinorhizobium fredii NGR234] Length = 222 Score = 331 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 152/222 (68%), Positives = 178/222 (80%) Query: 1 MSIFKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKP 60 M+ F+PK+ITFDCYGTLT FQM+E A+ +Y++++ M F+R FAAYRLDE+L WKP Sbjct: 1 MASFRPKYITFDCYGTLTNFQMAEAARDLYSEQLDEPRMQEFIRNFAAYRLDEILGDWKP 60 Query: 61 YEQVCKNAITRTCARWGIKTTDEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNA 120 Y +V N++ RTC R GIK DE Y+ VP WGPHADVPAGL+KVAKE PLVI SNA Sbjct: 61 YAEVVHNSLERTCKRNGIKFRDEAARVVYERVPNWGPHADVPAGLAKVAKEIPLVILSNA 120 Query: 121 DDSQIMHNVEQLGAPFHKVFTAQQAQAYKPRLSAFEYMLDNLNCNPEDVLHVSSSLRYDL 180 +SQIM NVE+LGAPFH V+TA+QAQAYKPR AFEYMLD L C PED+LH SSS RYDL Sbjct: 121 MNSQIMSNVEKLGAPFHAVYTAEQAQAYKPRFKAFEYMLDMLGCGPEDILHCSSSFRYDL 180 Query: 181 MPASDMGIKNKVFVARGHEPSTPYYGYTEIKDISGLPGVLGL 222 M A D+GIKNKV+V RGHEP+ PYYGYTEIKDISGLPGV+GL Sbjct: 181 MSAHDLGIKNKVWVNRGHEPANPYYGYTEIKDISGLPGVVGL 222 >ref|YP_002541869.1| haloacid dehalogenase, type II [Agrobacterium radiobacter K84] gb|ACM30272.1| haloacid dehalogenase, type II [Agrobacterium radiobacter K84] Length = 222 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 151/222 (68%), Positives = 178/222 (80%) Query: 1 MSIFKPKFITFDCYGTLTRFQMSETAQKIYADRVSAEDMPFFLRQFAAYRLDEVLDQWKP 60 M+ F+PK+ITFDCYGTLT FQM+E AQKIY +++ M F++ FAAYRLDE+L WKP Sbjct: 1 MTTFRPKYITFDCYGTLTNFQMAEAAQKIYGEQLDQPRMAQFIKNFAAYRLDEILGDWKP 60 Query: 61 YEQVCKNAITRTCARWGIKTTDEETGAFYKAVPTWGPHADVPAGLSKVAKEFPLVIFSNA 120 Y +V NA+ RTC + G+ DE+ + Y+ VP+WGPHADVPAGL+KVAKE PLVI SNA Sbjct: 61 YNEVLHNAVERTCRKNGVTFRDEDARSIYETVPSWGPHADVPAGLAKVAKEIPLVILSNA 120 Query: 121 DDSQIMHNVEQLGAPFHKVFTAQQAQAYKPRLSAFEYMLDNLNCNPEDVLHVSSSLRYDL 180 + QIMHNVE+LGAPFH VFTAQQA AYKPR AFEYM D L CNPEDV+H SSS RYDL Sbjct: 121 MNEQIMHNVEKLGAPFHAVFTAQQANAYKPRFKAFEYMFDMLGCNPEDVMHCSSSFRYDL 180 Query: 181 MPASDMGIKNKVFVARGHEPSTPYYGYTEIKDISGLPGVLGL 222 M A D+GIK+KV+V RGHEP+ PYY YTEIKDISGLPGV+GL Sbjct: 181 MSAYDLGIKHKVWVNRGHEPANPYYEYTEIKDISGLPGVVGL 222