BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3038.p (542 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774558.1| dipeptide/oligopeptide/nickel ABC transporte... 966 0.0 ref|YP_004750983.1| ABC peptide/opine/nickel family transporter,... 910 0.0 ref|ZP_03264255.1| ABC transporter related [Burkholderia sp. H16... 632 e-179 ref|ZP_04948758.1| ABC transporter [Burkholderia dolosa AUO158] ... 630 e-178 ref|YP_555944.1| peptide/opine/nickel ABC transporter ATPase [Bu... 619 e-175 >ref|YP_003774558.1| dipeptide/oligopeptide/nickel ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ62650.1| ABC-type dipeptide/oligopeptide/nickel transport system, duplicated ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 645 Score = 966 bits (2498), Expect = 0.0, Method: Composition-based stats. Identities = 516/542 (95%), Positives = 533/542 (98%) Query: 1 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRA 60 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRA Sbjct: 104 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRA 163 Query: 61 LALPNPDKIGERYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFK 120 LALPNPDKIGERYPHQVSGGQLQRVMAAMAL+T PELVILDEPTTALDVTTQIEVLRAFK Sbjct: 164 LALPNPDKIGERYPHQVSGGQLQRVMAAMALVTGPELVILDEPTTALDVTTQIEVLRAFK 223 Query: 121 KVVKEIGTTAVYVSHDLAVVAQMADRIIVLRDGAVREVGTTDQVLHAPADTYTQSLIAAA 180 VVKE+GTTAVYVSHDLAVVAQMADRIIVLRDGAVRE G+T QVLHAPAD+YTQ L+AAA Sbjct: 224 NVVKELGTTAVYVSHDLAVVAQMADRIIVLRDGAVRETGSTSQVLHAPADSYTQCLLAAA 283 Query: 181 CPAARVVQLREILPETVPAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGS 240 PAARVVQLREILP T+PAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGS Sbjct: 284 SPAARVVQLREILPATLPAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGS 343 Query: 241 TVGIIGESGSGKTTLARAVAGMIAPARGNIQLDGQNLSPTLEGRTREQFRRVQIVFQNAD 300 TVGIIGESGSGKTTLARAVAGMIAPARG+IQLDG+ LSPTLEGRTREQFRRVQIVFQNAD Sbjct: 344 TVGIIGESGSGKTTLARAVAGMIAPARGSIQLDGETLSPTLEGRTREQFRRVQIVFQNAD 403 Query: 301 TALNPAHTIGRILNRPLSFYHGLKGEAMRRRTAELLDLVKLPSSVIDRLPAELSGGQKQR 360 TALNP+H+IGRILNRPLSFYHGLKGEAMRRRTAELLDLV+LP++VIDRLPAELSGGQKQR Sbjct: 404 TALNPSHSIGRILNRPLSFYHGLKGEAMRRRTAELLDLVQLPATVIDRLPAELSGGQKQR 463 Query: 361 VNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAIC 420 VNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAIC Sbjct: 464 VNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAIC 523 Query: 421 DDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIGA 480 DDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIGA Sbjct: 524 DDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIGA 583 Query: 481 VDPSPEICAFLPRCAQRIDGVCNVVPPRRRNMEHGGEILCHRSDSDLQQSQMPLVPVEGI 540 VDPSP+ICAFLPRCAQR+DGVCNVVPPRRRNMEHGGEILCHRSD+DLQQSQ PLVPVEG+ Sbjct: 584 VDPSPDICAFLPRCAQRVDGVCNVVPPRRRNMEHGGEILCHRSDADLQQSQTPLVPVEGV 643 Query: 541 TV 542 TV Sbjct: 644 TV 645 Score = 96.7 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 89/282 (31%), Positives = 141/282 (50%), Gaps = 25/282 (8%) Query: 204 PLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVGIIGESGSGKTTLARAVAGM- 262 PL+ + GL D V I+ ++N T+ RG + +IGESGSGKTT+A ++ G Sbjct: 27 PLVEVQGLRVNARKEDG---SQVEIVKNVNFTVARGEVLALIGESGSGKTTIALSLLGYA 83 Query: 263 -----IAPAR---GNIQLDGQNLSPTLEGRTREQFRRVQIVFQNADTALNPAHTI-GRIL 313 IA + G Q+D + L R V + Q+A A NPA T+ +++ Sbjct: 84 RAGCHIAGGQVRIGERQIDQMDEKALLAMRGHH----VAYIAQSAAAAFNPARTLMDQVI 139 Query: 314 NRPLSFYHGL--KGEAMRRRTAELLDLVKLPS--SVIDRLPAELSGGQKQRVNLARALAA 369 L HG+ K AM R+ EL + LP+ + +R P ++SGGQ QRV A AL Sbjct: 140 ESALQ--HGVMDKASAM-RKAVELFRALALPNPDKIGERYPHQVSGGQLQRVMAAMALVT 196 Query: 370 KPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICDDIVVLYAG 429 P+L++ DE T+ALD +L + +EL + +++SHD++ V + D I+VL G Sbjct: 197 GPELVILDEPTTALDVTTQIEVLRAFKNVVKELGTTAVYVSHDLAVVAQMADRIIVLRDG 256 Query: 430 RMVANRPREAMMAPPYHPYSHLLLSSV-PAMQQGWLEQVAGA 470 + ++ P Y+ LL++ PA + L ++ A Sbjct: 257 AVRETGSTSQVLHAPADSYTQCLLAAASPAARVVQLREILPA 298 >ref|YP_004750983.1| ABC peptide/opine/nickel family transporter, ATPase subunit [Collimonas fungivorans Ter331] gb|AEK60160.1| ABC peptide/opine/nickel family transporter, ATPase subunit [Collimonas fungivorans Ter331] Length = 640 Score = 910 bits (2353), Expect = 0.0, Method: Composition-based stats. Identities = 488/543 (89%), Positives = 522/543 (96%), Gaps = 1/543 (0%) Query: 1 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRA 60 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQH VMDKASAMRKAVELFRA Sbjct: 98 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHRVMDKASAMRKAVELFRA 157 Query: 61 LALPNPDKIGERYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFK 120 LALP+P+ IG RYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFK Sbjct: 158 LALPDPEHIGRRYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFK 217 Query: 121 KVVKEIGTTAVYVSHDLAVVAQMADRIIVLRDGAVREVGTTDQVLHAPADTYTQSLIAAA 180 KVV+E+GTTAVYVSHDLAVVAQMADRI+VLRDGAVRE+G T QVL APAD+YTQSLIAAA Sbjct: 218 KVVRELGTTAVYVSHDLAVVAQMADRIVVLRDGAVREMGQTGQVLQAPADSYTQSLIAAA 277 Query: 181 CPAARVVQLREILPE-TVPAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRG 239 PA+RV Q+REILP+ + A+A+APLLRISGL+AGYG+PDRLGLPGVRILDDINLTIQRG Sbjct: 278 TPASRVAQVREILPDPALAAQAKAPLLRISGLIAGYGSPDRLGLPGVRILDDINLTIQRG 337 Query: 240 STVGIIGESGSGKTTLARAVAGMIAPARGNIQLDGQNLSPTLEGRTREQFRRVQIVFQNA 299 STVGIIGESGSGKTTLARAVAGMIAPARG+IQLDG+NLSPTL+GR+REQFRRVQIVFQNA Sbjct: 338 STVGIIGESGSGKTTLARAVAGMIAPARGSIQLDGENLSPTLQGRSREQFRRVQIVFQNA 397 Query: 300 DTALNPAHTIGRILNRPLSFYHGLKGEAMRRRTAELLDLVKLPSSVIDRLPAELSGGQKQ 359 DTALNPAHTIGRILNRPLSFYHGL G+AMRRRTAELLDLV+LPSSVIDRLP+ELSGGQKQ Sbjct: 398 DTALNPAHTIGRILNRPLSFYHGLSGDAMRRRTAELLDLVRLPSSVIDRLPSELSGGQKQ 457 Query: 360 RVNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAI 419 RVNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAI Sbjct: 458 RVNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAI 517 Query: 420 CDDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIG 479 CDDIVVLYAGRMVANRPR+AMMAPPYHPYSHLLLSSVPAMQQGWLEQ +GAGQHKLPPIG Sbjct: 518 CDDIVVLYAGRMVANRPRQAMMAPPYHPYSHLLLSSVPAMQQGWLEQASGAGQHKLPPIG 577 Query: 480 AVDPSPEICAFLPRCAQRIDGVCNVVPPRRRNMEHGGEILCHRSDSDLQQSQMPLVPVEG 539 V SP+ICAFLPRC R+DGVCN+V PRRR+MEHGGEILCHRSD++L+Q Q PL+PV+G Sbjct: 578 PVQASPDICAFLPRCTMRLDGVCNMVAPRRRHMEHGGEILCHRSDAELKQYQSPLLPVDG 637 Query: 540 ITV 542 +TV Sbjct: 638 VTV 640 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 97/300 (32%), Positives = 146/300 (48%), Gaps = 28/300 (9%) Query: 194 PETVPAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVGIIGESGSGKT 253 P T P E PL+ +SGL D V I+ D++ T+ RG + +IGESGSGKT Sbjct: 14 PGTPPGE---PLVSVSGLRVNARKDDG---SSVEIVKDVDFTVARGEVLALIGESGSGKT 67 Query: 254 TLARAVAGM------IAPAR---GNIQLDGQNLSPTLEGRTREQFRRVQIVFQNADTALN 304 T+A ++ G IA R G Q+D + L R V + Q+A A N Sbjct: 68 TIALSLLGYARAGCHIAGGRIRIGQRQIDQMDEKALLAMRGHH----VAYIAQSAAAAFN 123 Query: 305 PAHTI-GRILNRPLSFYHGLKGEAMRRRTAELLDLVKL--PSSVIDRLPAELSGGQKQRV 361 PA T+ +++ L K AM R+ EL + L P + R P ++SGGQ QRV Sbjct: 124 PARTLMDQVIESALQHRVMDKASAM-RKAVELFRALALPDPEHIGRRYPHQVSGGQLQRV 182 Query: 362 NLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICD 421 A AL P+L++ DE T+ALD +L ++ REL + +++SHD++ V + D Sbjct: 183 MAAMALITDPELVILDEPTTALDVTTQIEVLRAFKKVVRELGTTAVYVSHDLAVVAQMAD 242 Query: 422 DIVVLYAGRMVANRPREAMMAPPYHPYSH-LLLSSVPAMQQGWLEQV----AGAGQHKLP 476 IVVL G + ++ P Y+ L+ ++ PA + + ++ A A Q K P Sbjct: 243 RIVVLRDGAVREMGQTGQVLQAPADSYTQSLIAAATPASRVAQVREILPDPALAAQAKAP 302 >ref|ZP_03264255.1| ABC transporter related [Burkholderia sp. H160] gb|EEA04099.1| ABC transporter related [Burkholderia sp. H160] Length = 652 Score = 632 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 347/531 (65%), Positives = 408/531 (76%), Gaps = 2/531 (0%) Query: 1 MDEKALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRA 60 + K+L +RG VAYIAQSAAAAFNPAR++MDQVIESAL HG + K +A KAVELFRA Sbjct: 103 LSPKSLAGLRGRKVAYIAQSAAAAFNPARSIMDQVIESALIHGTLSKRAAQAKAVELFRA 162 Query: 61 LALPNPDKIGERYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFK 120 LALP+P+ IG RYPHQVSGGQLQR+MAAMALITDPELVILDEPTTALDVTTQI+VL+AF+ Sbjct: 163 LALPDPETIGRRYPHQVSGGQLQRLMAAMALITDPELVILDEPTTALDVTTQIDVLQAFR 222 Query: 121 KVVKEIGTTAVYVSHDLAVVAQMADRIIVLRDGAVREVGTTDQVLHAPADTYTQSLIAAA 180 +V+++ G TAVYVSHDLAVVAQMADRI+VL +G +RE G T+Q+LHAPA YTQSLIAA Sbjct: 223 RVIRQCGMTAVYVSHDLAVVAQMADRIVVLSNGEIRETGRTEQILHAPAHPYTQSLIAAV 282 Query: 181 CPAARVVQLREILPETVPAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGS 240 P A + P A PLL + GL AGYG D G P IL D++L I+RG Sbjct: 283 TPVAADGSTSAAPGASGPNVA--PLLELRGLTAGYGGTDAKGWPHKVILRDVDLVIERGQ 340 Query: 241 TVGIIGESGSGKTTLARAVAGMIAPARGNIQLDGQNLSPTLEGRTREQFRRVQIVFQNAD 300 TVG+IGESGSGKTTLA+ +AG++ ARGN+ LDG+ L+ L R+REQFR +QIVFQNAD Sbjct: 341 TVGVIGESGSGKTTLAKVIAGLVPMARGNLLLDGEPLAANLSRRSREQFRCIQIVFQNAD 400 Query: 301 TALNPAHTIGRILNRPLSFYHGLKGEAMRRRTAELLDLVKLPSSVIDRLPAELSGGQKQR 360 TALNP HT+ R L RPL FYHG+KGEA RRR AELL LV+LP+ + R ELSGGQKQR Sbjct: 401 TALNPTHTVERTLARPLKFYHGMKGEAARRRVAELLGLVRLPAELAQRRTGELSGGQKQR 460 Query: 361 VNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAIC 420 VNLARALAA+P LILCDEVTSALDTVV AAILELL +L+++L VSY+FI+HDI+ VRAI Sbjct: 461 VNLARALAAEPKLILCDEVTSALDTVVGAAILELLRDLQKKLGVSYLFITHDIAKVRAIS 520 Query: 421 DDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIGA 480 DDIVVLYAG V REA+ APPYHPYSHLL+SS P ++ GWLE+ LPPIG Sbjct: 521 DDIVVLYAGHRVETGNREALSAPPYHPYSHLLVSSAPELRAGWLEEAGERCHQTLPPIGE 580 Query: 481 VDPSPEICAFLPRCAQRIDGVCNVVPPRRRNMEHGGEILCHRSDSDLQQSQ 531 PE+C FL RC RIDGVCN P R + G ++LCHRS+ DL+Q Q Sbjct: 581 PAHEPELCTFLARCPMRIDGVCNRASPSVRTLTSGAQVLCHRSEEDLEQYQ 631 Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 135/269 (50%), Gaps = 12/269 (4%) Query: 220 RLGLPGVRILDDINLTIQRGSTVGIIGESGSGKTTLARAVAGMIAP----ARGNIQL--- 272 R G P I+ DI+ I RG + +IGESGSGKTT+A ++ G A G I++ Sbjct: 39 RPGEPDTTIVHDIDFEIARGEVLALIGESGSGKTTIALSLMGHARSGCRIAGGAIRVGDT 98 Query: 273 DGQNLSPTLEGRTREQFRRVQIVFQNADTALNPAHTIGRILNRPLSFYHGLKGEAMRRRT 332 D LSP R R+V + Q+A A NPA +I + + L A + + Sbjct: 99 DVLGLSPKSLAGLRG--RKVAYIAQSAAAAFNPARSIMDQVIESALIHGTLSKRAAQAKA 156 Query: 333 AELLDLVKL--PSSVIDRLPAELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVAAA 390 EL + L P ++ R P ++SGGQ QR+ A AL P+L++ DE T+ALD Sbjct: 157 VELFRALALPDPETIGRRYPHQVSGGQLQRLMAAMALITDPELVILDEPTTALDVTTQID 216 Query: 391 ILELLAELRRELQVSYMFISHDISTVRAICDDIVVLYAGRMVANRPREAMMAPPYHPYSH 450 +L+ + R+ ++ +++SHD++ V + D IVVL G + E ++ P HPY+ Sbjct: 217 VLQAFRRVIRQCGMTAVYVSHDLAVVAQMADRIVVLSNGEIRETGRTEQILHAPAHPYTQ 276 Query: 451 LLLSSV-PAMQQGWLEQVAGAGQHKLPPI 478 L+++V P G GA + P+ Sbjct: 277 SLIAAVTPVAADGSTSAAPGASGPNVAPL 305 >ref|ZP_04948758.1| ABC transporter [Burkholderia dolosa AUO158] gb|EAY71929.1| ABC transporter [Burkholderia dolosa AUO158] Length = 624 Score = 630 bits (1624), Expect = e-178, Method: Composition-based stats. Identities = 343/529 (64%), Positives = 405/529 (76%), Gaps = 8/529 (1%) Query: 5 ALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRALALP 64 AL A+RG VAYIAQSAAA+FNP+RT++DQVIESAL H M K A KAVELFRALALP Sbjct: 88 ALTALRGRKVAYIAQSAAASFNPSRTILDQVIESALIHKTMSKRDAQAKAVELFRALALP 147 Query: 65 NPDKIGERYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFKKVVK 124 PD IG+RYPHQVSGGQLQR+MAAMALITDPELVILDEPTTALDVTTQI+VL+AFK+V++ Sbjct: 148 EPDTIGKRYPHQVSGGQLQRLMAAMALITDPELVILDEPTTALDVTTQIDVLQAFKRVIR 207 Query: 125 EIGTTAVYVSHDLAVVAQMADRIIVLRDGAVREVGTTDQVLHAPADTYTQSLIAAACPAA 184 G +AVYVSHDLAVVAQMADRI+VL DG +RE G T+Q+LHAP YTQSL+AA P Sbjct: 208 RCGMSAVYVSHDLAVVAQMADRIVVLSDGVIREAGDTEQILHAPVHPYTQSLVAAVTP-- 265 Query: 185 RVVQLREILPETVPAEAR-APLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVG 243 + P+ PA A APLL + G VAGYGA G P IL +++L I RG TVG Sbjct: 266 -----HDAAPDGKPAPAEPAPLLEVRGAVAGYGARTAKGRPAKPILHEVDLRIGRGQTVG 320 Query: 244 IIGESGSGKTTLARAVAGMIAPARGNIQLDGQNLSPTLEGRTREQFRRVQIVFQNADTAL 303 +IGESGSGKTTLA+ +AG++ G I LDG+ L+ + RT+EQ RRVQIVFQNADTAL Sbjct: 321 VIGESGSGKTTLAKVIAGLVPATGGRILLDGEPLALDIAKRTKEQHRRVQIVFQNADTAL 380 Query: 304 NPAHTIGRILNRPLSFYHGLKGEAMRRRTAELLDLVKLPSSVIDRLPAELSGGQKQRVNL 363 NP HT+ R L RPL+FYHG++GE RRR AELLDLV+LP +V R ELSGGQKQRVNL Sbjct: 381 NPVHTVERTLARPLAFYHGIRGERARRRVAELLDLVRLPPAVAARRTGELSGGQKQRVNL 440 Query: 364 ARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICDDI 423 ARALAA+PDLILCDEVTSALDTVV AAI++LL +L+ +L VSY+FI+HDI+ VRAI DDI Sbjct: 441 ARALAAEPDLILCDEVTSALDTVVGAAIMDLLRDLQAKLGVSYVFITHDIAKVRAISDDI 500 Query: 424 VVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQHKLPPIGAVDP 483 VVLYAGR V R+A+ APPYHPYSHLL+SS P ++ GWL+ A L PI A Sbjct: 501 VVLYAGRRVETGSRDALCAPPYHPYSHLLVSSAPELRAGWLDDAAERCHRPLEPIAASAD 560 Query: 484 SPEICAFLPRCAQRIDGVCNVVPPRRRNMEHGGEILCHRSDSDLQQSQM 532 P++C FL RCA R+DGVCN P R + +G ++LCHRS+ DL Q QM Sbjct: 561 DPDLCPFLSRCAMRVDGVCNRTAPALRTLGNGAQVLCHRSEDDLMQFQM 609 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 132/260 (50%), Gaps = 10/260 (3%) Query: 204 PLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVGIIGESGSGKTTLARAVAGMI 263 PL+ + GL G P G I+ ++ I+RG + +IGESGSGKTT+A ++ G Sbjct: 7 PLVEVRGLRVVGGRP---GGAETTIVHGVDFDIRRGEVLALIGESGSGKTTIALSMMGHA 63 Query: 264 AP----ARGNIQLDGQNLSP-TLEGRTREQFRRVQIVFQNADTALNPAHTIGRILNRPLS 318 A G++ L G N+ T + R+V + Q+A + NP+ TI + Sbjct: 64 RAGCRIAGGSVTLGGTNVCALPASALTALRGRKVAYIAQSAAASFNPSRTILDQVIESAL 123 Query: 319 FYHGLKGEAMRRRTAELLDLVKLPS--SVIDRLPAELSGGQKQRVNLARALAAKPDLILC 376 + + + + EL + LP ++ R P ++SGGQ QR+ A AL P+L++ Sbjct: 124 IHKTMSKRDAQAKAVELFRALALPEPDTIGKRYPHQVSGGQLQRLMAAMALITDPELVIL 183 Query: 377 DEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICDDIVVLYAGRMVANRP 436 DE T+ALD +L+ + R +S +++SHD++ V + D IVVL G + Sbjct: 184 DEPTTALDVTTQIDVLQAFKRVIRRCGMSAVYVSHDLAVVAQMADRIVVLSDGVIREAGD 243 Query: 437 REAMMAPPYHPYSHLLLSSV 456 E ++ P HPY+ L+++V Sbjct: 244 TEQILHAPVHPYTQSLVAAV 263 >ref|YP_555944.1| peptide/opine/nickel ABC transporter ATPase [Burkholderia xenovorans LB400] gb|ABE36594.1| ABC peptide/opine/nickel family transporter, ATPase subunit [Burkholderia xenovorans LB400] Length = 665 Score = 619 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 343/541 (63%), Positives = 408/541 (75%), Gaps = 12/541 (2%) Query: 5 ALLAMRGHHVAYIAQSAAAAFNPARTLMDQVIESALQHGVMDKASAMRKAVELFRALALP 64 AL +RG VAYIAQSAAAAFNPART+MDQVIESAL HG + K +A KAVELFRALALP Sbjct: 107 ALADLRGRKVAYIAQSAAAAFNPARTIMDQVIESALIHGTLAKRAAQEKAVELFRALALP 166 Query: 65 NPDKIGERYPHQVSGGQLQRVMAAMALITDPELVILDEPTTALDVTTQIEVLRAFKKVVK 124 P+ IG RYPHQVSGGQLQR+MAAMALITDPELVILDEPTTALDVTTQI+VL+AF++V++ Sbjct: 167 EPETIGRRYPHQVSGGQLQRLMAAMALITDPELVILDEPTTALDVTTQIDVLQAFRRVIR 226 Query: 125 EIGTTAVYVSHDLAVVAQMADRIIVLRDGAVREVGTTDQVLHAPADTYTQSLIAAACPAA 184 + G TAVYVSHDLAVVAQMADRI+VL +G +RE G T+Q+LHAPA YTQSLIAA P Sbjct: 227 QCGMTAVYVSHDLAVVAQMADRIVVLSNGEIRETGRTEQILHAPAHPYTQSLIAAVTPVM 286 Query: 185 RVVQLREILPETV-----------PAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDIN 233 + + T P A APLL + L AGYG + G P IL+D++ Sbjct: 287 PDMPFAPVPAGTAATAVADGSALQPRPAAAPLLELRRLTAGYGGTNAKGWPNKVILNDVD 346 Query: 234 LTIQRGSTVGIIGESGSGKTTLARAVAGMIAPARGNIQLDGQNLSPTLEGRTREQFRRVQ 293 L I RG TVG+IGESGSGKTTLA+ +AG++ ARG + LDG+ L+ L R+REQFR + Sbjct: 347 LVIGRGQTVGVIGESGSGKTTLAKVIAGLVPMARGTLLLDGKPLAADLRRRSREQFRCIH 406 Query: 294 IVFQNADTALNPAHTIGRILNRPLSFYHGLKGEAMRRRTAELLDLVKLPSSVIDRLPAEL 353 IVFQNADTALNP HT+ R L RPL FYHG+KG+A +RR AELL+LV+LP+ + R EL Sbjct: 407 IVFQNADTALNPTHTVERTLARPLKFYHGMKGDAAKRRVAELLNLVRLPAELAQRRTGEL 466 Query: 354 SGGQKQRVNLARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDI 413 SGGQKQRVNLARALAA+P LILCDEVTSALDTVV AAILELL +L+++L VSY+FI+HDI Sbjct: 467 SGGQKQRVNLARALAAEPQLILCDEVTSALDTVVGAAILELLRDLQKKLGVSYLFITHDI 526 Query: 414 STVRAICDDIVVLYAGRMVANRPREAMMAPPYHPYSHLLLSSVPAMQQGWLEQVAGAGQH 473 + VRAI DDIVVLYAG V R+A+ APPYHPYSHLL+SS P ++ GWLE+ Sbjct: 527 AKVRAISDDIVVLYAGHRVETGTRDALSAPPYHPYSHLLVSSAPELRAGWLEEADERCHR 586 Query: 474 KLPPIGAVDPSPEICAFLPRCAQRIDGVCNVVPPRRRNMEHGGEILCHRSDSDLQQSQ-M 532 LPPIG PE+C FL RC RIDGVCN P R + G ++LCHRS+++L+Q Q M Sbjct: 587 ALPPIGEATHEPELCTFLARCPMRIDGVCNRTAPTERTLASGAQVLCHRSEAELEQYQSM 646 Query: 533 P 533 P Sbjct: 647 P 647 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 100/310 (32%), Positives = 148/310 (47%), Gaps = 23/310 (7%) Query: 193 LPETVPAEARAPLLRISGLVAGYGAPDRLGLPGVRILDDINLTIQRGSTVGIIGESGSGK 252 LP + E R LR+ G R G P I+ DI+ I RG + +IGESGSGK Sbjct: 22 LPSSNLVEVRG--LRVVG--------SRAGEPDTTIVHDIDFEIARGEVLALIGESGSGK 71 Query: 253 TTLARAVAGMIAP----ARGNIQL---DGQNLSPTLEGRTREQFRRVQIVFQNADTALNP 305 TT+A ++ G A G IQ+ D LSP R R+V + Q+A A NP Sbjct: 72 TTIALSLMGHARSGCRIAGGAIQVGDTDVLGLSPIALADLRG--RKVAYIAQSAAAAFNP 129 Query: 306 AHTIGRILNRPLSFYHGLKGEAMRRRTAELLDLVKL--PSSVIDRLPAELSGGQKQRVNL 363 A TI + + L A + + EL + L P ++ R P ++SGGQ QR+ Sbjct: 130 ARTIMDQVIESALIHGTLAKRAAQEKAVELFRALALPEPETIGRRYPHQVSGGQLQRLMA 189 Query: 364 ARALAAKPDLILCDEVTSALDTVVAAAILELLAELRRELQVSYMFISHDISTVRAICDDI 423 A AL P+L++ DE T+ALD +L+ + R+ ++ +++SHD++ V + D I Sbjct: 190 AMALITDPELVILDEPTTALDVTTQIDVLQAFRRVIRQCGMTAVYVSHDLAVVAQMADRI 249 Query: 424 VVLYAGRMVANRPREAMMAPPYHPYSHLLLSSV-PAMQQGWLEQV-AGAGQHKLPPIGAV 481 VVL G + E ++ P HPY+ L+++V P M V AG + A+ Sbjct: 250 VVLSNGEIRETGRTEQILHAPAHPYTQSLIAAVTPVMPDMPFAPVPAGTAATAVADGSAL 309 Query: 482 DPSPEICAFL 491 P P L Sbjct: 310 QPRPAAAPLL 319