BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3026.p (397 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABM69268.1| GcdH [Azoarcus sp. CIB] 703 0.0 ref|YP_002354094.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] >g... 699 0.0 ref|YP_001022358.1| glutaryl-CoA dehydrogenase [Methylibium petr... 699 0.0 ref|YP_982360.1| acyl-CoA dehydrogenase domain-containing protei... 698 0.0 ref|YP_158711.1| glutaryl-CoA dehydrogenase [Aromatoleum aromati... 697 0.0 >gb|ABM69268.1| GcdH [Azoarcus sp. CIB] Length = 395 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 333/391 (85%), Positives = 364/391 (93%) Query: 7 RHAFDYADPLMLEQQLSDDERQVRDAAQAYCQDRLAPRVLEAFRHEKMDVSIFREMGELG 66 R FD+ADPL L+ QL+D ER VRD+A+AY Q+RL PRV EAFRHEK D +IF EMGELG Sbjct: 5 RVTFDWADPLYLDSQLTDTERMVRDSARAYSQERLLPRVQEAFRHEKTDRAIFNEMGELG 64 Query: 67 LLGATIDEQYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMTPINAFGTEAQKQK 126 LLGATI EQYGG+G+NYVCYGLIAREVERVDSGYRSMMSVQSSLVM PIN FG+E KQK Sbjct: 65 LLGATIPEQYGGSGMNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGSEETKQK 124 Query: 127 YLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKVDGGYSLSGSKMWITNSPVADVFVVW 186 YLPKLA+GEW+GCFGLTEPNHGSDPGSM+TRARKVDGGYSLSG+KMWITNSP+ADVFVVW Sbjct: 125 YLPKLATGEWVGCFGLTEPNHGSDPGSMVTRARKVDGGYSLSGAKMWITNSPIADVFVVW 184 Query: 187 AKDDEGEIRGFILDKGSKGLSAPAIHGKVGLRSSITGEIVMDNVFCPEENAFPDVRGLKG 246 AKDD G+IRGF+L+KG KGLSAPAIHGKVGLR+SITGEIVMD VFCPEENAFP VRGLKG Sbjct: 185 AKDDAGDIRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFCPEENAFPTVRGLKG 244 Query: 247 PFTCLNSARYGIAWGALGAAEDCYERARRYTMERQQFGRPLAANQLVQKKLADMLTEISL 306 PFTCLNSARYGIAWGALGAAE CYE AR+YTM+R+QFGRPLAANQL+QKKLADMLTEI+L Sbjct: 245 PFTCLNSARYGIAWGALGAAEACYETARQYTMDRKQFGRPLAANQLIQKKLADMLTEITL 304 Query: 307 GLQGCLRLGRLKDEGYSGIEQTSIMKRNSCGKALDIARMARDMMGGNGISDEFGVARHLV 366 GLQGCLRLGRLKDEG + +E TSIMKRNSCGK+LDIAR+ARDM+GGNGISDEF +ARHLV Sbjct: 305 GLQGCLRLGRLKDEGNAPVELTSIMKRNSCGKSLDIARVARDMLGGNGISDEFCIARHLV 364 Query: 367 NLEVVNTYEGTHDVHALILGRAITGLAAFSN 397 NLEVVNTYEGTHD+HALILGRAITGLAAFSN Sbjct: 365 NLEVVNTYEGTHDIHALILGRAITGLAAFSN 395 >ref|YP_002354094.1| acyl-CoA dehydrogenase [Thauera sp. MZ1T] gb|ACK53198.1| acyl-CoA dehydrogenase domain protein [Thauera sp. MZ1T] Length = 395 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 333/391 (85%), Positives = 364/391 (93%) Query: 7 RHAFDYADPLMLEQQLSDDERQVRDAAQAYCQDRLAPRVLEAFRHEKMDVSIFREMGELG 66 + +F++ DPL+L+ QL++ ER VRD A+AY QD+L PRV EAFRHEK D +IFREMGELG Sbjct: 5 KASFNWEDPLLLDLQLTETERMVRDTARAYSQDKLLPRVQEAFRHEKTDAAIFREMGELG 64 Query: 67 LLGATIDEQYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMTPINAFGTEAQKQK 126 LLGATI EQYGG+GLNYVCYGLIAREVERVDSGYRSMMSVQSSLVM PIN FGTEAQKQK Sbjct: 65 LLGATIPEQYGGSGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKQK 124 Query: 127 YLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKVDGGYSLSGSKMWITNSPVADVFVVW 186 YLPKLA+GEWIGCFGLTEPNHGSDPGSMITRARKVDGG+SLSGSKMWITNSP+ADVFVVW Sbjct: 125 YLPKLATGEWIGCFGLTEPNHGSDPGSMITRARKVDGGFSLSGSKMWITNSPIADVFVVW 184 Query: 187 AKDDEGEIRGFILDKGSKGLSAPAIHGKVGLRSSITGEIVMDNVFCPEENAFPDVRGLKG 246 AKDDEG+IRGFIL+KG KGLSAPAIHGKVGLR+SITGEIVMD VF PEENAFP VRGLKG Sbjct: 185 AKDDEGQIRGFILEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPTVRGLKG 244 Query: 247 PFTCLNSARYGIAWGALGAAEDCYERARRYTMERQQFGRPLAANQLVQKKLADMLTEISL 306 PFTCLNSAR+GIAWGALGAAE CYE AR+YTM+R QFGRPLAANQL+QKKLADMLTEI+L Sbjct: 245 PFTCLNSARFGIAWGALGAAEACYETARQYTMDRNQFGRPLAANQLIQKKLADMLTEITL 304 Query: 307 GLQGCLRLGRLKDEGYSGIEQTSIMKRNSCGKALDIARMARDMMGGNGISDEFGVARHLV 366 GLQ LR+GR+KDEG + +E TSI+KRNSCGKALDIARMARDM+GGNGISDE+ VARHLV Sbjct: 305 GLQAVLRVGRMKDEGIAPVEITSIIKRNSCGKALDIARMARDMLGGNGISDEYPVARHLV 364 Query: 367 NLEVVNTYEGTHDVHALILGRAITGLAAFSN 397 NLEVVNTYEGTHDVHALILGRAITG+AAFSN Sbjct: 365 NLEVVNTYEGTHDVHALILGRAITGIAAFSN 395 >ref|YP_001022358.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1] gb|ABM96123.1| glutaryl-CoA dehydrogenase [Methylibium petroleiphilum PM1] Length = 422 Score = 699 bits (1804), Expect = 0.0, Method: Composition-based stats. Identities = 331/393 (84%), Positives = 363/393 (92%) Query: 3 KTQQRHAFDYADPLMLEQQLSDDERQVRDAAQAYCQDRLAPRVLEAFRHEKMDVSIFREM 62 +T +F + DPL+L+ QLS+DER VRDAAQAYC+DRLAPRVLEAFRHEK D +IFREM Sbjct: 29 ETAMAASFHWDDPLLLDSQLSEDERAVRDAAQAYCRDRLAPRVLEAFRHEKTDPAIFREM 88 Query: 63 GELGLLGATIDEQYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMTPINAFGTEA 122 GELGLLGAT+ E YGGAGLN+VCYGL+AREVERVDSGYRSMMSVQSSLVM PI+AFGTEA Sbjct: 89 GELGLLGATLPEAYGGAGLNHVCYGLVAREVERVDSGYRSMMSVQSSLVMVPIHAFGTEA 148 Query: 123 QKQKYLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKVDGGYSLSGSKMWITNSPVADV 182 QKQKYLPKLA GEWIGCFGLTEPNHGSDPGS+ TRAR V GGY LSG+KMWITNSP+ADV Sbjct: 149 QKQKYLPKLARGEWIGCFGLTEPNHGSDPGSLATRARAVQGGYVLSGAKMWITNSPIADV 208 Query: 183 FVVWAKDDEGEIRGFILDKGSKGLSAPAIHGKVGLRSSITGEIVMDNVFCPEENAFPDVR 242 FVVWAKDD G+IRGFILDKG KGL APA+HGKVGLR+S+TGEIVMD VFCPEENAFP+VR Sbjct: 209 FVVWAKDDGGQIRGFILDKGMKGLEAPAVHGKVGLRASLTGEIVMDEVFCPEENAFPEVR 268 Query: 243 GLKGPFTCLNSARYGIAWGALGAAEDCYERARRYTMERQQFGRPLAANQLVQKKLADMLT 302 GLKGPFTCLNSARYGIAWGALGAAEDC+ RAR+Y ++R QFGRPLAANQL+QKKLADM T Sbjct: 269 GLKGPFTCLNSARYGIAWGALGAAEDCFHRARQYVLDRPQFGRPLAANQLIQKKLADMQT 328 Query: 303 EISLGLQGCLRLGRLKDEGYSGIEQTSIMKRNSCGKALDIARMARDMMGGNGISDEFGVA 362 EI+LGLQGCLRLGR+KDEG + +E TSIMKRNSCGK+L+IARMARDMMGGNGISDEFGVA Sbjct: 329 EITLGLQGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLEIARMARDMMGGNGISDEFGVA 388 Query: 363 RHLVNLEVVNTYEGTHDVHALILGRAITGLAAF 395 RHLVNLEVVNTYEGTHDVHALILGRAITG+ AF Sbjct: 389 RHLVNLEVVNTYEGTHDVHALILGRAITGIQAF 421 >ref|YP_982360.1| acyl-CoA dehydrogenase domain-containing protein [Polaromonas naphthalenivorans CJ2] gb|ABM37439.1| acyl-CoA dehydrogenase domain protein [Polaromonas naphthalenivorans CJ2] Length = 394 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 329/386 (85%), Positives = 365/386 (94%) Query: 10 FDYADPLMLEQQLSDDERQVRDAAQAYCQDRLAPRVLEAFRHEKMDVSIFREMGELGLLG 69 F + DP++L QL+DDERQV DAA+AY QDRLAPRVLEAFR+EK D +IFREMGELGLLG Sbjct: 9 FQWNDPMLLASQLTDDERQVADAARAYSQDRLAPRVLEAFRNEKTDAAIFREMGELGLLG 68 Query: 70 ATIDEQYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMTPINAFGTEAQKQKYLP 129 ATI E YGGAGLNYVCYGL+AREVER+DSGYRSM+SVQSSLVM PINAFGTEA KQKYLP Sbjct: 69 ATIPEAYGGAGLNYVCYGLVAREVERIDSGYRSMLSVQSSLVMVPINAFGTEATKQKYLP 128 Query: 130 KLASGEWIGCFGLTEPNHGSDPGSMITRARKVDGGYSLSGSKMWITNSPVADVFVVWAKD 189 +LA+GE+IGCFGLTEP+HGSDPGSMITRARKV GGYSLSG+KMWITNSP+ADVFVVWAKD Sbjct: 129 RLATGEFIGCFGLTEPDHGSDPGSMITRARKVPGGYSLSGNKMWITNSPIADVFVVWAKD 188 Query: 190 DEGEIRGFILDKGSKGLSAPAIHGKVGLRSSITGEIVMDNVFCPEENAFPDVRGLKGPFT 249 DEG IRGF+L+KG KGLSAPA+HGKVGLR+SITGEIVMD VFCPEENAFP+VRGLKGPFT Sbjct: 189 DEGAIRGFVLEKGWKGLSAPAVHGKVGLRASITGEIVMDAVFCPEENAFPEVRGLKGPFT 248 Query: 250 CLNSARYGIAWGALGAAEDCYERARRYTMERQQFGRPLAANQLVQKKLADMLTEISLGLQ 309 CLNSARYGIAWGALGAAEDC+ERAR+Y ++R+QFG+PLAANQL+QKKLADM+T+ISLGLQ Sbjct: 249 CLNSARYGIAWGALGAAEDCFERARQYVLDRKQFGKPLAANQLIQKKLADMMTDISLGLQ 308 Query: 310 GCLRLGRLKDEGYSGIEQTSIMKRNSCGKALDIARMARDMMGGNGISDEFGVARHLVNLE 369 GCLRLGR+KDEG + +E TSIMKRNSCGKALDIAR+ARDM+GGNGISDEFGVARHLVNLE Sbjct: 309 GCLRLGRMKDEGMAAVEVTSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLE 368 Query: 370 VVNTYEGTHDVHALILGRAITGLAAF 395 VVNTYEGTHDVHALILGRAITG+ AF Sbjct: 369 VVNTYEGTHDVHALILGRAITGIPAF 394 >ref|YP_158711.1| glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] emb|CAI07810.1| Glutaryl-CoA dehydrogenase [Aromatoleum aromaticum EbN1] Length = 395 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 329/391 (84%), Positives = 365/391 (93%) Query: 7 RHAFDYADPLMLEQQLSDDERQVRDAAQAYCQDRLAPRVLEAFRHEKMDVSIFREMGELG 66 R F++ADPL L++QL++ ER VRD A+AY Q+RL PRV EAFRHEK D +IF EMGELG Sbjct: 5 RVTFNWADPLHLDEQLTETERLVRDTARAYSQERLLPRVQEAFRHEKTDRAIFNEMGELG 64 Query: 67 LLGATIDEQYGGAGLNYVCYGLIAREVERVDSGYRSMMSVQSSLVMTPINAFGTEAQKQK 126 LLGATI E+YGG+G+NYVCYGLIAREVERVDSGYRSMMSVQSSLVM PIN FGTEAQK+K Sbjct: 65 LLGATIPEEYGGSGMNYVCYGLIAREVERVDSGYRSMMSVQSSLVMVPINEFGTEAQKKK 124 Query: 127 YLPKLASGEWIGCFGLTEPNHGSDPGSMITRARKVDGGYSLSGSKMWITNSPVADVFVVW 186 YLPKLA+GEW+GCFGLTEPNHGSDPGSM+TRA+KVDGGYSLSGSKMWITNSP+ADVFVVW Sbjct: 125 YLPKLATGEWVGCFGLTEPNHGSDPGSMVTRAKKVDGGYSLSGSKMWITNSPIADVFVVW 184 Query: 187 AKDDEGEIRGFILDKGSKGLSAPAIHGKVGLRSSITGEIVMDNVFCPEENAFPDVRGLKG 246 AKDDEG+IRGF+L+KG KGLSAPAIHGKVGLR+SITGEIVMD VF PEENAFP VRGLKG Sbjct: 185 AKDDEGQIRGFVLEKGWKGLSAPAIHGKVGLRASITGEIVMDEVFVPEENAFPTVRGLKG 244 Query: 247 PFTCLNSARYGIAWGALGAAEDCYERARRYTMERQQFGRPLAANQLVQKKLADMLTEISL 306 PFTCLNSAR+GIAWGALGAAE CYE AR+YT++R+QFGRPLAANQL+QKKLADMLTEI+L Sbjct: 245 PFTCLNSARFGIAWGALGAAEACYETARQYTLDRKQFGRPLAANQLIQKKLADMLTEITL 304 Query: 307 GLQGCLRLGRLKDEGYSGIEQTSIMKRNSCGKALDIARMARDMMGGNGISDEFGVARHLV 366 GLQGCLRLGR+KDEG + +E TSIMKRNSCGK+LDIAR+ARDM+GGNGISDEF VARHLV Sbjct: 305 GLQGCLRLGRMKDEGTAAVEITSIMKRNSCGKSLDIARVARDMLGGNGISDEFCVARHLV 364 Query: 367 NLEVVNTYEGTHDVHALILGRAITGLAAFSN 397 NLEVVNTYEGTHDVHALILGRAIT +AAFSN Sbjct: 365 NLEVVNTYEGTHDVHALILGRAITDIAAFSN 395