BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3023.p (384 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002942760.1| acyl-CoA dehydrogenase domain-containing pro... 462 e-128 ref|YP_004153206.1| acyL-CoA dehydrogenase domain-containing pro... 455 e-126 ref|YP_258603.1| acyl-CoA dehydrogenase domain-containing protei... 454 e-125 ref|YP_523839.1| acyl-CoA dehydrogenase-like protein [Rhodoferax... 452 e-125 ref|ZP_06688262.1| acyl-CoA dehydrogenase [Achromobacter piechau... 449 e-124 >ref|YP_002942760.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus S110] gb|ACS17494.1| acyl-CoA dehydrogenase domain protein [Variovorax paradoxus S110] Length = 380 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 278/382 (72%), Positives = 317/382 (82%), Gaps = 6/382 (1%) Query: 1 MNFEHTEERRMLADSLRRLITEQYGFEARKHLLQSAPGMSRDMWSQLAEMGVIGALFREE 60 MNFEHTE+RRMLADSL R I EQY F+AR + +SA G S++++ AE+GVIGALF E Sbjct: 1 MNFEHTEDRRMLADSLNRFIAEQYAFDARDRIAKSAHGFSKEIFQNFAELGVIGALFSEA 60 Query: 61 DGGYGGGGFDIAVVFEEIGRGLLLEPLLGSAILVGEAIAAAGTPARKALLEQIIAGQTLA 120 DGG+GGGGFDIAVVFE +GRGL++EPLLG A++VGEA++AAG+ A+K L II G T+A Sbjct: 61 DGGFGGGGFDIAVVFEALGRGLVVEPLLG-AVMVGEALSAAGSDAQKQTLGDIINGVTVA 119 Query: 121 ALAHEEADSHYAPTHVAHVATRATQSADGGWRLQGHKAVVVHAEAADVFLVSARTSGETD 180 A AH+EAD+HY T VA TRA +S DG W L G KAVV E AD+FLVSAR+SG+ D Sbjct: 120 AFAHDEADTHYERTRVA---TRAERSGDG-WVLHGAKAVVPQGEQADLFLVSARSSGKVD 175 Query: 181 DPDGISLFLIPADTAGLQLQGSDTIDGGRVADLLLQDAALPADALLGSPGDGAALLERIL 240 D GISLFL+PA TAGL ++G IDGGRVA+L L L A+ALLG+ G GAA LER + Sbjct: 176 DEAGISLFLVPAKTAGLSVRGCPAIDGGRVAELTLDGVKLGAEALLGAEGQGAATLERAI 235 Query: 241 GRGVLALCAEALGAMEVAKEATLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV 300 GRGVLALCAEALGAME AK ATLDYLRTRKQFG+ IGSFQALQHRMADLLLE+EQARSAV Sbjct: 236 GRGVLALCAEALGAMEAAKTATLDYLRTRKQFGMLIGSFQALQHRMADLLLEIEQARSAV 295 Query: 301 INAAAALD-ADRLTRERALSAAKFSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLV 359 INAAAA+D ADR+ RERALSAAKFSIGRIG LVAEESIQ+HGGIGMTWELPL HYAKRLV Sbjct: 296 INAAAAIDGADRVARERALSAAKFSIGRIGALVAEESIQMHGGIGMTWELPLPHYAKRLV 355 Query: 360 MIDHQLGDEDHHLQRYIALGRE 381 MIDHQLGDEDHHLQRYIALG+E Sbjct: 356 MIDHQLGDEDHHLQRYIALGKE 377 >ref|YP_004153206.1| acyL-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] gb|ADU35095.1| acyl-CoA dehydrogenase domain-containing protein [Variovorax paradoxus EPS] Length = 380 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 273/385 (70%), Positives = 312/385 (81%), Gaps = 6/385 (1%) Query: 1 MNFEHTEERRMLADSLRRLITEQYGFEARKHLLQSAPGMSRDMWSQLAEMGVIGALFREE 60 MNFEHTE+RRMLADSL R I EQY F+AR + +SA G S++++ Q AE+GVIGALF E Sbjct: 1 MNFEHTEDRRMLADSLNRFIAEQYAFDARDRIAKSAHGFSKEIFQQFAELGVIGALFSEA 60 Query: 61 DGGYGGGGFDIAVVFEEIGRGLLLEPLLGSAILVGEAIAAAGTPARKALLEQIIAGQTLA 120 DGG+GGGGFDIAVVFE +GRGL++EPLLG A++VGEA++AAG+ A+K L II G T+A Sbjct: 61 DGGFGGGGFDIAVVFEALGRGLVVEPLLG-AVMVGEALSAAGSDAQKEKLGDIINGVTVA 119 Query: 121 ALAHEEADSHYAPTHVAHVATRATQSADGGWRLQGHKAVVVHAEAADVFLVSARTSGETD 180 A AH+EAD+HY T V T+A +S DG W L G KAVV E AD+FLVSARTSG D Sbjct: 120 AFAHDEADTHYERTRVQ---TKAERSGDG-WVLNGAKAVVPQGEQADLFLVSARTSGNVD 175 Query: 181 DPDGISLFLIPADTAGLQLQGSDTIDGGRVADLLLQDAALPADALLGSPGDGAALLERIL 240 D GISLFL+PA TAGL ++G IDGGRVA+L L DALLG+ G GAA LER + Sbjct: 176 DEAGISLFLVPAKTAGLTVRGCPAIDGGRVAELTFDGVKLGTDALLGTEGQGAATLERAI 235 Query: 241 GRGVLALCAEALGAMEVAKEATLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV 300 GRGVLALCAEA+GAME AK ATL+YLRTRKQFG+ IGSFQALQHRMADLLLE+EQARSAV Sbjct: 236 GRGVLALCAEAVGAMEAAKTATLEYLRTRKQFGILIGSFQALQHRMADLLLEIEQARSAV 295 Query: 301 INAAAALDA-DRLTRERALSAAKFSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLV 359 INAAAA DR+ RERALSAAKFSIGRIG LVAEESIQ+HGGIGMTWELPL HYAKRLV Sbjct: 296 INAAAASGGTDRVARERALSAAKFSIGRIGALVAEESIQMHGGIGMTWELPLPHYAKRLV 355 Query: 360 MIDHQLGDEDHHLQRYIALGREVPA 384 MIDHQLGDEDHHLQRYIALG+ + A Sbjct: 356 MIDHQLGDEDHHLQRYIALGKGLAA 380 >ref|YP_258603.1| acyl-CoA dehydrogenase domain-containing protein [Pseudomonas fluorescens Pf-5] gb|AAY90759.1| acyl-CoA dehydrogenase domain protein [Pseudomonas fluorescens Pf-5] Length = 377 Score = 454 bits (1167), Expect = e-125, Method: Composition-based stats. Identities = 264/381 (69%), Positives = 304/381 (79%), Gaps = 4/381 (1%) Query: 1 MNFEHTEERRMLADSLRRLITEQYGFEARKHLLQSAPGMSRDMWSQLAEMGVIGALFREE 60 MNFEH+ ERRML DSL R I + Y E R+ LQS G + +W QLAEMGVIGALF E Sbjct: 1 MNFEHSAERRMLGDSLNRFIAQHYNLEKRQQSLQSGQGFNSGIWQQLAEMGVIGALFSEA 60 Query: 61 DGGYGGGGFDIAVVFEEIGRGLLLEPLLGSAILVGEAIAAAGTPARKALLEQIIAGQTLA 120 DGGYGGGGFD+A+VFE +GRGLL+EPLLGSA+L G+AIA+AG+ +K L QII G +A Sbjct: 61 DGGYGGGGFDLALVFEAVGRGLLVEPLLGSAVLAGDAIASAGSETQKIELAQIIDGSLIA 120 Query: 121 ALAHEEADSHYAPTHVAHVATRATQSADGGWRLQGHKAVVVHAEAADVFLVSARTSGETD 180 ALAH+E DSHY + VA RA A GGW L G K++V+H E A + +VSART+G D Sbjct: 121 ALAHDEPDSHY---ELNRVACRAEPQA-GGWCLDGTKSLVLHGEQAGLLVVSARTAGAID 176 Query: 181 DPDGISLFLIPADTAGLQLQGSDTIDGGRVADLLLQDAALPADALLGSPGDGAALLERIL 240 D GISLFL+P DT GL+++ S T+DGG VA + L +P ALLG+ G A LER + Sbjct: 177 DSQGISLFLVPRDTPGLEIRSSATLDGGPVAQVRLNQLLVPGSALLGTLHQGHATLERAI 236 Query: 241 GRGVLALCAEALGAMEVAKEATLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV 300 GRGVLALCAEALGAMEVAK ATLDYLRTR+QFG PIGSFQALQHRMA LLLE+EQARSAV Sbjct: 237 GRGVLALCAEALGAMEVAKVATLDYLRTRQQFGRPIGSFQALQHRMAVLLLEIEQARSAV 296 Query: 301 INAAAALDADRLTRERALSAAKFSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLVM 360 INAA+AL+ADRL RERALSAAK SIGRIGTLVA+E IQLHGGIGMTWELPL+HYAKRLVM Sbjct: 297 INAASALEADRLDRERALSAAKVSIGRIGTLVAQECIQLHGGIGMTWELPLAHYAKRLVM 356 Query: 361 IDHQLGDEDHHLQRYIALGRE 381 IDHQLGDEDHHLQRYIALG++ Sbjct: 357 IDHQLGDEDHHLQRYIALGKQ 377 >ref|YP_523839.1| acyl-CoA dehydrogenase-like protein [Rhodoferax ferrireducens T118] gb|ABD70308.1| acyl-CoA dehydrogenase-like [Rhodoferax ferrireducens T118] Length = 381 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 279/385 (72%), Positives = 313/385 (81%), Gaps = 5/385 (1%) Query: 1 MNFEHTEERRMLADSLRRLITEQYGFEARKHLLQSAPGMSRDMWSQLAEMGVIGALFREE 60 MNFEHTEERRMLADSL R I EQY FEAR + QSA G S ++W Q AE+GVIGALFRE Sbjct: 1 MNFEHTEERRMLADSLNRFIAEQYSFEARDRIAQSAHGFSPEIWQQFAELGVIGALFRET 60 Query: 61 DGGYGGGGFDIAVVFEEIGRGLLLEPLLGSAILVGEAIAAAGTPARKALLEQIIAGQTLA 120 DGG+GG GFDIAVVFE +GRGL++EPLLGSA+L GEAIAAAG A+KA+L II G T+A Sbjct: 61 DGGFGGAGFDIAVVFEALGRGLVVEPLLGSAVLAGEAIAAAGNDAQKAVLADIIGGTTIA 120 Query: 121 ALAHEEADSHYAPTHVAHVATRATQSADGGWRLQGHKAVVVHAEAADVFLVSARTSGETD 180 A AH+E D+HY +A V TRA +SA+G W L G KAVV+ E AD+F+VSART+G Sbjct: 121 AFAHDEPDTHY---ELARVLTRAERSANG-WVLNGAKAVVLQGERADLFVVSARTAGAVG 176 Query: 181 DPDGISLFLIPADTAGLQLQGSDTIDGGRVADLLLQDAALPADALLGSPGDGAALLERIL 240 D GISLFL+ + GL ++G TIDGGRVA+L L AL ALLG G G A LER + Sbjct: 177 DEAGISLFLVSSKAPGLVVRGCPTIDGGRVAELSLNGVALDPGALLGVEGQGLAALERAI 236 Query: 241 GRGVLALCAEALGAMEVAKEATLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV 300 GRGVLALCAEALGAMEVAK ATLDYLRTRKQFG+ IGSFQALQHRMADLLLE+EQARSAV Sbjct: 237 GRGVLALCAEALGAMEVAKAATLDYLRTRKQFGVFIGSFQALQHRMADLLLEIEQARSAV 296 Query: 301 IN-AAAALDADRLTRERALSAAKFSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLV 359 IN AAA DADRLTRERALSAAK SIGRIG LVAEESIQ+HGGIGMTWELPL+HYAKRL+ Sbjct: 297 INAAAALDDADRLTRERALSAAKVSIGRIGALVAEESIQMHGGIGMTWELPLAHYAKRLI 356 Query: 360 MIDHQLGDEDHHLQRYIALGREVPA 384 MIDHQLGDEDHHLQR+IALGR+ A Sbjct: 357 MIDHQLGDEDHHLQRFIALGRQTAA 381 >ref|ZP_06688262.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] gb|EFF74790.1| acyl-CoA dehydrogenase [Achromobacter piechaudii ATCC 43553] Length = 377 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 262/381 (68%), Positives = 300/381 (78%), Gaps = 6/381 (1%) Query: 1 MNFEHTEERRMLADSLRRLITEQYGFEARKHLLQSAPGMSRDMWSQLAEMGVIGALFREE 60 MNFEHTE+RRML+D LRR +TEQY F R+ QS+ G S W + AE+G IGALF E Sbjct: 1 MNFEHTEDRRMLSDMLRRFVTEQYDFATRERNAQSSEGYSVQFWRRYAELGAIGALFTEA 60 Query: 61 DGGYGGGGFDIAVVFEEIGRGLLLEPLLGSAILVGEAIAAAGTPARKALLEQIIAGQTLA 120 DGG GG GFDI+VVFE +GRGL++EP L A++VG AIA AGTPA++ L+ +IAG A Sbjct: 61 DGGLGGAGFDISVVFEALGRGLVVEPFL-DALMVGSAIAQAGTPAQREALDGLIAGAITA 119 Query: 121 ALAHEEADSHYAPTHVAHVATRATQSADGGWRLQGHKAVVVHAEAADVFLVSARTSGETD 180 ALA E DS Y + V TRA +S DG W L G KAVV E AD+FLVSARTSG D Sbjct: 120 ALAQAEPDSGY---ELERVTTRAERSGDG-WVLNGSKAVVAAGEHADLFLVSARTSGADD 175 Query: 181 DPDGISLFLIPADTAGLQLQGSDTIDGGRVADLLLQDAALPADALLGSPGDGAALLERIL 240 D DGISLFL+ A T GL L+G IDGGR ADL L + L +ALLG G G ALLER + Sbjct: 176 DVDGISLFLVSAGTPGLTLRGYGLIDGGRAADLSLANVNLAPEALLGEAGGGHALLERAV 235 Query: 241 GRGVLALCAEALGAMEVAKEATLDYLRTRKQFGLPIGSFQALQHRMADLLLEVEQARSAV 300 GRG+LALCAEA+GAM+ A++ATL+YLRTR+QFG PIGSFQALQHRMAD+LLE+EQARSAV Sbjct: 236 GRGILALCAEAVGAMDCARDATLEYLRTRRQFGTPIGSFQALQHRMADVLLEIEQARSAV 295 Query: 301 INAAAALD-ADRLTRERALSAAKFSIGRIGTLVAEESIQLHGGIGMTWELPLSHYAKRLV 359 INAAAALD DR TRERALSAAKF+IGRIGTLVAEESIQLHGGIGMTWELPL+HYAKRLV Sbjct: 296 INAAAALDHPDRATRERALSAAKFTIGRIGTLVAEESIQLHGGIGMTWELPLAHYAKRLV 355 Query: 360 MIDHQLGDEDHHLQRYIALGR 380 MIDHQLGDEDHHL+RYIAL + Sbjct: 356 MIDHQLGDEDHHLRRYIALAQ 376