BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3019.p (289 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001896354.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderi... 240 2e-61 ref|YP_559615.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl... 240 2e-61 ref|YP_003906326.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding ... 236 4e-60 ref|ZP_03265511.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [... 233 3e-59 ref|ZP_06841329.1| Enoyl-CoA hydratase/isomerase [Burkholderia s... 230 2e-58 >ref|YP_001896354.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD17130.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia phytofirmans PsJN] Length = 706 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 123/167 (73%), Positives = 143/167 (85%) Query: 20 GAILVVTIDNPPVNALGVAVRRGLMSAIEEGEADAGVAAILVTGAGRNFIGGADIREFGK 79 G +L+VTID+ PVNAL VRRGL++AIE +AD V A+L+ GAGRNFI GADIREFGK Sbjct: 16 GKVLLVTIDHAPVNALSADVRRGLLAAIEAADADKAVEAVLIVGAGRNFIAGADIREFGK 75 Query: 80 PPQSPLLTELCNRIEACNKPVLAAIHGAALGGGLEVALAAHYRVALSNARLGLPEVQLGL 139 PP P L ++CNRIEAC KPV+AAIHGAALGGGLEVALAAHYR+A+ A+LGLPEVQLGL Sbjct: 76 PPVPPSLPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVDGAKLGLPEVQLGL 135 Query: 140 LPGAGGTQRTPRLIGAQAALDMMLTGRHLSAKEALSLGLVDQLAEGD 186 LPGAGGTQRTPRLIGAQAALD++L+GRH SAKEAL+ GL+D+L D Sbjct: 136 LPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALAFGLIDRLGSSD 182 >ref|YP_559615.1| short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gb|ABE31563.1| 3-hydroxyacyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 706 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 125/170 (73%), Positives = 147/170 (86%), Gaps = 2/170 (1%) Query: 20 GAILVVTIDNPPVNALGVAVRRGLMSAIEEGEADAGVAAILVTGAGRNFIGGADIREFGK 79 G +L+VTID+ PVNAL VRRGL++A+E +AD+ V A+L+ GAGRNFI GADIREFGK Sbjct: 16 GKVLLVTIDHAPVNALSADVRRGLLAAVEAADADSAVQAVLIVGAGRNFIAGADIREFGK 75 Query: 80 PPQSPLLTELCNRIEACNKPVLAAIHGAALGGGLEVALAAHYRVALSNARLGLPEVQLGL 139 PP P L ++CNRIEAC KPV+AAIHGAALGGGLEVALAAHYR+A+ A+LGLPEVQLGL Sbjct: 76 PPLPPALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLGLPEVQLGL 135 Query: 140 LPGAGGTQRTPRLIGAQAALDMMLTGRHLSAKEALSLGLVDQLAEGDSAD 189 LPGAGGTQRTPRLIGAQAALD++L+GRH SAKEAL+LGL+D+L G S D Sbjct: 136 LPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALALGLIDRL--GSSGD 183 >ref|YP_003906326.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia sp. CCGE1003] gb|ADN57035.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein [Burkholderia sp. CCGE1003] Length = 706 Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats. Identities = 123/167 (73%), Positives = 143/167 (85%) Query: 20 GAILVVTIDNPPVNALGVAVRRGLMSAIEEGEADAGVAAILVTGAGRNFIGGADIREFGK 79 G +L+VTID+PPVNAL VRRGL+SA+E ++DA + A+L+ GAGRNFI GADIREFGK Sbjct: 16 GKVLLVTIDHPPVNALSADVRRGLLSAVEAADSDASIEAVLLVGAGRNFIAGADIREFGK 75 Query: 80 PPQSPLLTELCNRIEACNKPVLAAIHGAALGGGLEVALAAHYRVALSNARLGLPEVQLGL 139 PP P L ++CNRIEA KPV+AA+HGAALGGGLEVALAAHYR+A ARLGLPEVQLGL Sbjct: 76 PPVPPSLPDVCNRIEASTKPVVAALHGAALGGGLEVALAAHYRIAAEGARLGLPEVQLGL 135 Query: 140 LPGAGGTQRTPRLIGAQAALDMMLTGRHLSAKEALSLGLVDQLAEGD 186 LPGAGGTQRTPRLIGAQAALD+ML+GRH SAKEAL+ GLVD+L + Sbjct: 136 LPGAGGTQRTPRLIGAQAALDLMLSGRHASAKEALAWGLVDRLGASE 182 >ref|ZP_03265511.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160] gb|EEA02936.1| 3-hydroxyacyl-CoA dehydrogenase NAD-binding [Burkholderia sp. H160] Length = 706 Score = 233 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 126/170 (74%), Positives = 146/170 (85%), Gaps = 2/170 (1%) Query: 20 GAILVVTIDNPPVNALGVAVRRGLMSAIEEGEADAGVAAILVTGAGRNFIGGADIREFGK 79 G +L+VTID+ PVNAL VRRGL++AIE +AD V A+L+ GAGRNFI GADIREFGK Sbjct: 16 GKVLLVTIDHAPVNALSADVRRGLLAAIEAADADQAVQAVLIVGAGRNFIAGADIREFGK 75 Query: 80 PPQSPLLTELCNRIEACNKPVLAAIHGAALGGGLEVALAAHYRVALSNARLGLPEVQLGL 139 PP P L E+CNRIEAC KPV+AAIHGAALGGGLEVALAAHYR+A+ A+LGLPEVQLGL Sbjct: 76 PPVPPSLPEVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVDGAKLGLPEVQLGL 135 Query: 140 LPGAGGTQRTPRLIGAQAALDMMLTGRHLSAKEALSLGLVDQLAEGDSAD 189 LPGAGGTQRTPRLIGAQAALD++L+GRH SAKEAL+ G++D+L GDS D Sbjct: 136 LPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALAFGMIDRL--GDSGD 183 >ref|ZP_06841329.1| Enoyl-CoA hydratase/isomerase [Burkholderia sp. Ch1-1] gb|EFG71229.1| Enoyl-CoA hydratase/isomerase [Burkholderia sp. Ch1-1] Length = 337 Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats. Identities = 122/167 (73%), Positives = 144/167 (86%) Query: 20 GAILVVTIDNPPVNALGVAVRRGLMSAIEEGEADAGVAAILVTGAGRNFIGGADIREFGK 79 G +L+VTID+ PVNAL VRRGL++A+E +AD V A+L+ GAGRNFI GADIREFGK Sbjct: 16 GKVLLVTIDHAPVNALSADVRRGLLAAVEAADADNAVEAVLIVGAGRNFIAGADIREFGK 75 Query: 80 PPQSPLLTELCNRIEACNKPVLAAIHGAALGGGLEVALAAHYRVALSNARLGLPEVQLGL 139 PP P L ++CNRIEAC KPV+AAIHGAALGGGLEVALAAHYR+A+ A+LGLPEVQLGL Sbjct: 76 PPVPPALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLGLPEVQLGL 135 Query: 140 LPGAGGTQRTPRLIGAQAALDMMLTGRHLSAKEALSLGLVDQLAEGD 186 LPGAGGTQRTPRLIGAQAALD++L+GRH S+KEAL+LGL+D+L D Sbjct: 136 LPGAGGTQRTPRLIGAQAALDLILSGRHASSKEALALGLIDRLGSSD 182