BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3014.p (234 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_523833.1| ABC transporter-like protein [Rhodoferax ferrir... 358 4e-97 ref|YP_421967.1| ABC-type branched-chain amino acid transport sy... 295 5e-78 ref|YP_001525785.1| branched-chain amino acid ABC transporter AT... 276 3e-72 ref|YP_003401563.1| ABC transporter [Archaeoglobus profundus DSM... 191 1e-46 ref|ZP_00053572.1| COG0411: ABC-type branched-chain amino acid t... 182 3e-44 >ref|YP_523833.1| ABC transporter-like protein [Rhodoferax ferrireducens T118] gb|ABD70302.1| ABC transporter related [Rhodoferax ferrireducens T118] Length = 237 Score = 358 bits (919), Expect = 4e-97, Method: Composition-based stats. Identities = 188/234 (80%), Positives = 205/234 (87%) Query: 1 MLQLEKVSVRFGGLTAVDEVTLQVGTGDVVGLVGANGAGKTTLFNAISGLVRPTSGSIRF 60 MLQL+ VSVRFGGLTAV+ VTL VGT DVVGLVG NGAGKTTLFNAISGLVRPTSG I F Sbjct: 1 MLQLKNVSVRFGGLTAVNNVTLAVGTQDVVGLVGPNGAGKTTLFNAISGLVRPTSGEITF 60 Query: 61 NGADILHAPLHRRARLGIGRTFQIPQPMHELTVRQNLIVAQRFATGKVDAAKIDEVLAFT 120 +GAD++ AP+++RAR+GIGRTFQ+PQPMHELTVRQNL VAQRF TG VD KIDE+L FT Sbjct: 61 DGADVMRAPMYKRARMGIGRTFQVPQPMHELTVRQNLAVAQRFGTGSVDQKKIDEILEFT 120 Query: 121 GLAEKAERDAATELALTELKALEVAKALATQPKLLLLDEVLAGLETNGKRRFMQMLKGLH 180 LA KA R+AATELALTELKALEVAKALAT PKLLLLDEV AGLET GKR FM MLK LH Sbjct: 121 SLAGKAARNAATELALTELKALEVAKALATNPKLLLLDEVFAGLETTGKRHFMSMLKNLH 180 Query: 181 EAFAVGIVIIEHDIETISNLCPRVAVLNFGQLIAEGAPAQVFNDPAVIKSYTGA 234 + F+VGI+IIEHDIETISNLC RVAVLNFG+LIAEG P +VF DPAVIKSYTG Sbjct: 181 DKFSVGIIIIEHDIETISNLCQRVAVLNFGELIAEGTPEEVFRDPAVIKSYTGG 234 >ref|YP_421967.1| ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magneticum AMB-1] dbj|BAE51408.1| ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magneticum AMB-1] Length = 238 Score = 295 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 152/234 (64%), Positives = 184/234 (78%) Query: 1 MLQLEKVSVRFGGLTAVDEVTLQVGTGDVVGLVGANGAGKTTLFNAISGLVRPTSGSIRF 60 +L+L+ ++V FGGL AV +V+ + GDV+GLVG NGAGKTTLFNA+SGLVRPT G F Sbjct: 2 LLELDGITVAFGGLIAVGDVSFSMAEGDVLGLVGPNGAGKTTLFNAVSGLVRPTRGKAHF 61 Query: 61 NGADILHAPLHRRARLGIGRTFQIPQPMHELTVRQNLIVAQRFATGKVDAAKIDEVLAFT 120 G D++ P+H RAR GIGR FQ+PQPMHELTVR+NL+VA RFATG+VD +I+E+L Sbjct: 62 LGRDLVAMPIHTRARAGIGRAFQVPQPMHELTVRENLMVASRFATGRVDKQRIEEILDLL 121 Query: 121 GLAEKAERDAATELALTELKALEVAKALATQPKLLLLDEVLAGLETNGKRRFMQMLKGLH 180 L KA+ DAAT LALTE KALEV KALAT PKLL+LDEVLAGLET GKR FM L + Sbjct: 122 KLGHKADSDAATSLALTEQKALEVGKALATNPKLLMLDEVLAGLETAGKRAFMHTLSEVR 181 Query: 181 EAFAVGIVIIEHDIETISNLCPRVAVLNFGQLIAEGAPAQVFNDPAVIKSYTGA 234 + + + ++IIEHDIETI+ LCPRV VLNFG+LIAEG+P VFNDP VI+SYTG Sbjct: 182 QRYGLALLIIEHDIETITRLCPRVVVLNFGRLIAEGSPESVFNDPEVIRSYTGG 235 >ref|YP_001525785.1| branched-chain amino acid ABC transporter ATPase [Azorhizobium caulinodans ORS 571] dbj|BAF88867.1| ABC-type branched-chain amino acid transport ATPase component [Azorhizobium caulinodans ORS 571] Length = 236 Score = 276 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 156/234 (66%), Positives = 183/234 (78%), Gaps = 1/234 (0%) Query: 1 MLQLEKVSVRFGGLTAVDEVTLQVGTGDVVGLVGANGAGKTTLFNAISGLVRPTSGSIRF 60 ML LE VSVRFGGL A+ ++ V G+++GLVG NGAGKTTLFN+ISGLVR G I Sbjct: 1 MLALEGVSVRFGGLLALSNISFSVEKGEILGLVGPNGAGKTTLFNSISGLVR-ARGRISV 59 Query: 61 NGADILHAPLHRRARLGIGRTFQIPQPMHELTVRQNLIVAQRFATGKVDAAKIDEVLAFT 120 G DI PLHRRA+ GIGRTFQIPQPMH LTVR+NL VAQ F G+ D A+I+E+L Sbjct: 60 GGQDITGLPLHRRAKAGIGRTFQIPQPMHHLTVRENLTVAQVFGAGRNDPARINEILEVM 119 Query: 121 GLAEKAERDAATELALTELKALEVAKALATQPKLLLLDEVLAGLETNGKRRFMQMLKGLH 180 L+ KA+ DAA+ LAL ELK LE+AKALAT+P+LLLLDEVLAGLE+N KR FM LK LH Sbjct: 120 QLSHKADADAASALALQELKRLEIAKALATEPRLLLLDEVLAGLESNAKRSFMLKLKELH 179 Query: 181 EAFAVGIVIIEHDIETISNLCPRVAVLNFGQLIAEGAPAQVFNDPAVIKSYTGA 234 F + IVI+EHDIETISNLC R VLNFGQLIA+G PA+VFN+PAV++SYTGA Sbjct: 180 ALFGLTIVIVEHDIETISNLCTRAVVLNFGQLIADGTPAEVFNNPAVVESYTGA 233 >ref|YP_003401563.1| ABC transporter [Archaeoglobus profundus DSM 5631] gb|ADB58890.1| ABC transporter related protein [Archaeoglobus profundus DSM 5631] Length = 247 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 110/237 (46%), Positives = 159/237 (67%), Gaps = 6/237 (2%) Query: 1 MLQLEKVSVRFGGLTAVDEVTLQVGTGDVVGLVGANGAGKTTLFNAISGLVRPTSGSIRF 60 +L++E V+ RFGGL A+D V+ +V ++VG++G NGAGKTTLFN ISG+ +P G + F Sbjct: 2 ILKVEGVTKRFGGLVALDNVSFEVKRKEIVGIIGPNGAGKTTLFNVISGVYKPEEGRVIF 61 Query: 61 NGADILHAPLHRRARLGIGRTFQIPQPMHELTVRQNLIVAQRFATGKVD---AAKI-DEV 116 NG DI P + ARLGI RTFQI +P+ EL+V++N++V F +D A KI D+V Sbjct: 62 NGKDITGLPPFKIARLGIARTFQIVKPLSELSVKENVMVGACFGKEYMDLESAEKIADDV 121 Query: 117 LAFTGLAEKAERDAATELALTELKALEVAKALATQPKLLLLDEVLAGLETNGKRRFMQML 176 L L EKA+ A +L + E K LE+A+ALA++P LLLLDEVLAGL ++++ Sbjct: 122 LKLVKLNEKADLPAG-KLNVPEKKRLELARALASKPDLLLLDEVLAGLNPAEVSEMIEII 180 Query: 177 KGLHEAFAVGIVIIEHDIETISNLCPRVAVLNFGQLIAEGAPAQVFNDPAVIKSYTG 233 + + ++ + I++IEH + I N+ RV VL++G+ IAEG P V NDP VI++Y G Sbjct: 181 RDIRDS-GITILMIEHLMHAIMNVSDRVIVLDYGKKIAEGKPEDVANDPKVIEAYLG 236 >ref|ZP_00053572.1| COG0411: ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magnetotacticum MS-1] Length = 164 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 96/153 (62%), Positives = 117/153 (76%), Gaps = 1/153 (0%) Query: 1 MLQLEKVSVRFGGLTAVDEVTLQVGTGDVVGLVGANGAGKTTLFNAISGLVRPTSGSIRF 60 +L+L+ ++V FGGLTAV +VT + GDV+GLVG NGAGKTTLFNA+SGLVRPT G+ RF Sbjct: 2 LLELDGITVAFGGLTAVGDVTFSMAKGDVLGLVGPNGAGKTTLFNAVSGLVRPTRGTARF 61 Query: 61 NGADILHAPLHRRARLGIGRTFQIPQPMHELTVRQNLIVAQRFATGKVDAAKIDEVLAFT 120 NG D++ P+H RAR GIGR FQ+PQPMHELTVR+NL+VA RFATG+VD +I+E+L Sbjct: 62 NGHDLVSMPIHARARAGIGRAFQVPQPMHELTVRENLMVASRFATGRVDKERIEEILDLL 121 Query: 121 GLAEKAERDAATELALTELKALEVAKALATQPK 153 L KAE DAAT LALTE K + L QPK Sbjct: 122 KLGHKAESDAATSLALTEQKP-GSGQGLGHQPK 153