BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3013.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_523832.1| ABC transporter-like protein [Rhodoferax ferrir... 363 2e-98 ref|ZP_00053570.1| COG0410: ABC-type branched-chain amino acid t... 287 9e-76 ref|YP_421968.1| ABC-type branched-chain amino acid transport sy... 285 3e-75 ref|YP_001525784.1| branched-chain amino acid ABC transporter AT... 270 1e-70 ref|ZP_08706650.1| branched-chain amino acid ABC transporter [Ve... 209 4e-52 >ref|YP_523832.1| ABC transporter-like protein [Rhodoferax ferrireducens T118] gb|ABD70301.1| ABC transporter related [Rhodoferax ferrireducens T118] Length = 233 Score = 363 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 189/254 (74%), Positives = 215/254 (84%), Gaps = 21/254 (8%) Query: 1 MLEVTNLRAGYGAINVLWDVSLTVGQGQLTTIIGPNGAGKTTLLRAIMGLIPIGQGQVTL 60 MLEV+N+RAGYGAINVLWDVSLTV +GQLTTIIGPNGAGKTTLLRAIMGL+P+ QG+V L Sbjct: 1 MLEVSNVRAGYGAINVLWDVSLTVARGQLTTIIGPNGAGKTTLLRAIMGLLPVSQGEVKL 60 Query: 61 DGKVLNGMPTWEMSKVSMAMIPEGRMIFRAMSIEENLIVGAFAPQHRAHACQHFARREGL 120 +GK L+G PTW+M+ VS+AMIPEGRM FR MS+EENLI+GAF QHRA Sbjct: 61 NGKTLSGTPTWKMADVSLAMIPEGRMTFRDMSVEENLIMGAFPKQHRA------------ 108 Query: 121 GDVVIRACARVKDNLERAYTMFPKLRERRRQLAGSLSGGEAQMLAMARGLMSEPKLLIID 180 RV++NLE++Y MFP+L ERRRQLAGSLSGGEAQMLAMARGLM++P+LLIID Sbjct: 109 ---------RVQENLEKSYQMFPRLSERRRQLAGSLSGGEAQMLAMARGLMADPQLLIID 159 Query: 181 EPSLGLAPVVVNELFEILARLKAEGRTIILVEQNTERAVGVADHVYLMQGGKVILSQKAS 240 EPSLGLAPV+VNELFEILARLK GRTI+LVEQNT RAV VADHVYLMQ GKV+LSQ A+ Sbjct: 160 EPSLGLAPVLVNELFEILARLKEGGRTIVLVEQNTHRAVAVADHVYLMQSGKVVLSQPAN 219 Query: 241 EVALDHLHDLYFAR 254 EV+LDHLHDLYFAR Sbjct: 220 EVSLDHLHDLYFAR 233 >ref|ZP_00053570.1| COG0410: ABC-type branched-chain amino acid transport systems, ATPase component [Magnetospirillum magnetotacticum MS-1] Length = 242 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 150/254 (59%), Positives = 188/254 (74%), Gaps = 21/254 (8%) Query: 1 MLEVTNLRAGYGAINVLWDVSLTVGQGQLTTIIGPNGAGKTTLLRAIMGLIPIGQGQVTL 60 +LE+ +LRAGYG+INVLWD+SLT+ +G+LT I+GPNG GKTTLLRAIMGL+ G G+V Sbjct: 4 LLEIEDLRAGYGSINVLWDLSLTIEEGKLTCILGPNGGGKTTLLRAIMGLVKTGAGRVLY 63 Query: 61 DGKVLNGMPTWEMSKVSMAMIPEGRMIFRAMSIEENLIVGAFAPQHRAHACQHFARREGL 120 G TW+M +AMIPEGRM+FR MS+ +NL++GAF + R +A + Sbjct: 64 QGADRTNAATWDMVADGIAMIPEGRMVFRDMSVADNLMMGAFPKKCRKNAAR-------- 115 Query: 121 GDVVIRACARVKDNLERAYTMFPKLRERRRQLAGSLSGGEAQMLAMARGLMSEPKLLIID 180 NL+ AY MFP+L ERR QLAG+LSGGEAQMLAM RGLM EPKL+++D Sbjct: 116 -------------NLKMAYDMFPRLYERRDQLAGALSGGEAQMLAMGRGLMEEPKLILVD 162 Query: 181 EPSLGLAPVVVNELFEILARLKAEGRTIILVEQNTERAVGVADHVYLMQGGKVILSQKAS 240 EPSLGLAPVVV+E+ IL RL+ EG TI+LVEQNT +A+ +ADHVYL++GGKV+LS+ AS Sbjct: 163 EPSLGLAPVVVDEVMGILDRLRHEGLTIVLVEQNTNKALKIADHVYLVRGGKVVLSETAS 222 Query: 241 EVALDHLHDLYFAR 254 V L HLHDLYFAR Sbjct: 223 SVDLGHLHDLYFAR 236 >ref|YP_421968.1| ABC-type branched-chain amino acid transport systems [Magnetospirillum magneticum AMB-1] dbj|BAE51409.1| ABC-type branched-chain amino acid transport systems [Magnetospirillum magneticum AMB-1] Length = 242 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 148/254 (58%), Positives = 187/254 (73%), Gaps = 21/254 (8%) Query: 1 MLEVTNLRAGYGAINVLWDVSLTVGQGQLTTIIGPNGAGKTTLLRAIMGLIPIGQGQVTL 60 +LE+ +LRAGYG+INVLWD+SL++ +G+LT I+GPNG GKTTLLRAIMGL+ G+V Sbjct: 4 LLEIESLRAGYGSINVLWDLSLSIEEGKLTCILGPNGGGKTTLLRAIMGLVKTESGRVLY 63 Query: 61 DGKVLNGMPTWEMSKVSMAMIPEGRMIFRAMSIEENLIVGAFAPQHRAHACQHFARREGL 120 G+ PTW+M +AMIPEGRM+FR MS+ +NL++GAF + RA+A + Sbjct: 64 QGRDRTNAPTWDMVADGVAMIPEGRMVFRDMSVADNLLMGAFPKKCRANAPK-------- 115 Query: 121 GDVVIRACARVKDNLERAYTMFPKLRERRRQLAGSLSGGEAQMLAMARGLMSEPKLLIID 180 NL+ Y MFP+L ERR QLAG+LSGGEAQMLAM RGLM EPKL+++D Sbjct: 116 -------------NLQMVYDMFPRLYERRDQLAGALSGGEAQMLAMGRGLMEEPKLILVD 162 Query: 181 EPSLGLAPVVVNELFEILARLKAEGRTIILVEQNTERAVGVADHVYLMQGGKVILSQKAS 240 EPSLGLAPVVV+E+ IL RLK EG TI+LVEQNT +A+ +ADHVYL++GGKV+LS+ A Sbjct: 163 EPSLGLAPVVVDEVMGILDRLKQEGLTIVLVEQNTNKALKIADHVYLVRGGKVVLSETAD 222 Query: 241 EVALDHLHDLYFAR 254 V L LHDLYFAR Sbjct: 223 SVDLGRLHDLYFAR 236 >ref|YP_001525784.1| branched-chain amino acid ABC transporter ATPase [Azorhizobium caulinodans ORS 571] dbj|BAF88866.1| ABC-type branched-chain amino acid transport ATPase component [Azorhizobium caulinodans ORS 571] Length = 236 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 144/254 (56%), Positives = 187/254 (73%), Gaps = 23/254 (9%) Query: 1 MLEVTNLRAGYGAINVLWDVSLTVGQGQLTTIIGPNGAGKTTLLRAIMGLIPIGQGQVTL 60 MLE NL AGYGAI VLWDV+L G LT+I+GPNGAGKTTLLRA+ GL+P G++ L Sbjct: 1 MLETRNLSAGYGAITVLWDVNLKFRAGALTSIVGPNGAGKTTLLRALTGLVP-HTGEILL 59 Query: 61 DGKVLNGMPTWEMSKVSMAMIPEGRMIFRAMSIEENLIVGAFAPQHRAHACQHFARREGL 120 DG L G TW+++ + M+PEGR++FR M++EENL +GA+ + R Sbjct: 60 DGAPLKG-KTWDLAAQGLVMVPEGRLVFRDMTVEENLFLGAYPARCR------------- 105 Query: 121 GDVVIRACARVKDNLERAYTMFPKLRERRRQLAGSLSGGEAQMLAMARGLMSEPKLLIID 180 GD+ NLER Y+ FP+L+ERR QLAGSLSGGEAQM+AM RGLM++P++L+ID Sbjct: 106 GDL--------SANLERMYSFFPRLKERRAQLAGSLSGGEAQMVAMGRGLMAKPRILLID 157 Query: 181 EPSLGLAPVVVNELFEILARLKAEGRTIILVEQNTERAVGVADHVYLMQGGKVILSQKAS 240 EPSLGLAPV+VNE+FEI+ RLK EG TI+L+EQNT A+ VAD V+L++ GKV++S+ A+ Sbjct: 158 EPSLGLAPVIVNEVFEIIRRLKEEGTTIVLIEQNTRIALSVADDVHLIRSGKVVMSEPAA 217 Query: 241 EVALDHLHDLYFAR 254 + LD LHDLYFAR Sbjct: 218 GIDLDRLHDLYFAR 231 >ref|ZP_08706650.1| branched-chain amino acid ABC transporter [Veillonella sp. oral taxon 780 str. F0422] gb|EGS39037.1| branched-chain amino acid ABC transporter [Veillonella sp. oral taxon 780 str. F0422] Length = 236 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 106/245 (43%), Positives = 163/245 (66%), Gaps = 22/245 (8%) Query: 1 MLEVTNLRAGYGAINVLWDVSLTVGQGQLTTIIGPNGAGKTTLLRAIMGLIPIGQGQVTL 60 ML++ N+ AGYG I L ++L V QG + ++IG NGAGK+T +R+IMGL+ +G++T Sbjct: 1 MLKIENVVAGYGHITALKSINLEVPQGSIVSLIGANGAGKSTTMRSIMGLVKPTEGRITF 60 Query: 61 DGKVLNGMPTWEMSKVSMAMIPEGRMIFRAMSIEENLIVGAFAPQHRAHACQHFARREGL 120 +GK + M T ++ K ++++PEGR I + MS+ ENL +GA+ Sbjct: 61 EGKDITSMKTHDIVKSGISLVPEGRQILQDMSVYENLEMGAY------------------ 102 Query: 121 GDVVIRACARVKDNLERAYTMFPKLRERRRQLAGSLSGGEAQMLAMARGLMSEPKLLIID 180 IR A + D++++ + FP L ER QL G+LSGG+ QMLA+ R LM+ PKLL++D Sbjct: 103 ----IRKDAEINDDIKKVFKRFPILDERSYQLGGTLSGGQQQMLAIGRALMARPKLLLLD 158 Query: 181 EPSLGLAPVVVNELFEILARLKAEGRTIILVEQNTERAVGVADHVYLMQGGKVILSQKAS 240 EPS+GLAP+VVNE+FE++ + AEG T++LVEQN +A+ +AD+ Y+++ GK++LS A Sbjct: 159 EPSMGLAPLVVNEIFEVIKEISAEGTTVLLVEQNVRQALKIADYAYVLETGKIVLSGPAE 218 Query: 241 EVALD 245 E+ D Sbjct: 219 EIRHD 223