BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.3012.p (424 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774567.1| mandelate racemase/muconate lactonizing [Her... 848 0.0 ref|YP_004360227.1| mandelate racemase/muconate lactonizing prot... 754 0.0 ref|ZP_07774785.1| mandelate racemase/muconate lactonizing enzym... 744 0.0 ref|ZP_04585756.1| mandelate racemase/muconate lactonizing enzym... 734 0.0 gb|EGH80437.1| mandelate racemase/muconate lactonizing protein [... 733 0.0 >ref|YP_003774567.1| mandelate racemase/muconate lactonizing [Herbaspirillum seropedicae SmR1] gb|ADJ62659.1| mandelate racemase/muconate lactonizing (D-glucarate dehydratase) protein [Herbaspirillum seropedicae SmR1] Length = 424 Score = 848 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 408/424 (96%), Positives = 420/424 (99%) Query: 1 MKIARVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL 60 MKI RVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL Sbjct: 1 MKITRVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL 60 Query: 61 VKEQLIGLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD 120 VKE+L+GLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD Sbjct: 61 VKERLVGLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD 120 Query: 121 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPDGWGEALSEEQIVAQARK 180 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPD WGEALSEEQIVAQARK Sbjct: 121 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPDAWGEALSEEQIVAQARK 180 Query: 181 MIEENGFKSIKLKAGALDPEHEVACIKALKKAFPDAPLRIDPNGNWSLETAIRMADLLGD 240 MIEENGF+SIKLKAGAL PEHEVACIKAL+KAFPDAPLRIDPNGNWSL+TAIRMA+LLGD Sbjct: 181 MIEENGFQSIKLKAGALAPEHEVACIKALRKAFPDAPLRIDPNGNWSLQTAIRMAELLGD 240 Query: 241 DLQYYEDPTPDLEGMAELHRRTGLPLATNMVVTDFDELRRSVALNSVQIVLADHHYWGGL 300 DLQYYEDPTP LEGMAELHRRTGLPLATNMVVTDFDELRRSVAL+SVQIVLADHHYWGGL Sbjct: 241 DLQYYEDPTPGLEGMAELHRRTGLPLATNMVVTDFDELRRSVALDSVQIVLADHHYWGGL 300 Query: 301 RDTQQLAKMCDIFGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI 360 RDTQQLAKMCD+FGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI Sbjct: 301 RDTQQLAKMCDVFGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI 360 Query: 361 RGGKLPIRNGCVQITDAPGLGVEVDQEQLRKLHQLYLECGIRQRDDVGQMRKYKPEWKTV 420 +GGKLPIRNGCVQITDAPGLGVEVDQ+QLRKLHQLYLECGIRQRDDVGQMRKY+P+WKTV Sbjct: 361 QGGKLPIRNGCVQITDAPGLGVEVDQDQLRKLHQLYLECGIRQRDDVGQMRKYQPDWKTV 420 Query: 421 KPRF 424 KPRF Sbjct: 421 KPRF 424 >ref|YP_004360227.1| mandelate racemase/muconate lactonizing protein [Burkholderia gladioli BSR3] gb|AEA60271.1| mandelate racemase/muconate lactonizing protein [Burkholderia gladioli BSR3] Length = 424 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 364/424 (85%), Positives = 396/424 (93%) Query: 1 MKIARVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL 60 MKI RVTVTPIAFKD PLLNA+GIHEPYALRSIIEIETD G+IGLGESYGDAPAL LD Sbjct: 1 MKITRVTVTPIAFKDAPLLNAAGIHEPYALRSIIEIETDTGHIGLGESYGDAPALAALDA 60 Query: 61 VKEQLIGLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD 120 VK +L+GLDPF LN LR IVRGVVA APAS AGAELAPGSHASKAVSNAYSAFEVACLD Sbjct: 61 VKGELVGLDPFKLNRLREIVRGVVARQAPASAAGAELAPGSHASKAVSNAYSAFEVACLD 120 Query: 121 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPDGWGEALSEEQIVAQARK 180 AQARYLN PLVDLLGGAVR+E+PFSAYLFFKYA+HIDSPYAPD WGEAL E QIV QAR+ Sbjct: 121 AQARYLNAPLVDLLGGAVRREVPFSAYLFFKYAEHIDSPYAPDAWGEALDEAQIVEQARR 180 Query: 181 MIEENGFKSIKLKAGALDPEHEVACIKALKKAFPDAPLRIDPNGNWSLETAIRMADLLGD 240 MI+ +GF+SIKLKAGAL PEHEVACIKAL++AFP APLRIDPNGNWSL+TA+RMA+LLGD Sbjct: 181 MIDAHGFESIKLKAGALAPEHEVACIKALRRAFPAAPLRIDPNGNWSLDTALRMAELLGD 240 Query: 241 DLQYYEDPTPDLEGMAELHRRTGLPLATNMVVTDFDELRRSVALNSVQIVLADHHYWGGL 300 DLQYYEDPTP LEGMAELHRRTG+PLATNMVVTDFDE RR VALNSVQIVLADHHYWGGL Sbjct: 241 DLQYYEDPTPGLEGMAELHRRTGMPLATNMVVTDFDEFRRGVALNSVQIVLADHHYWGGL 300 Query: 301 RDTQQLAKMCDIFGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI 360 RDTQQLA+MCD FG+GVSMHSNSHLGISLMAM+HVAA+VE+LSYACDTHYPWQEPDEEV+ Sbjct: 301 RDTQQLARMCDSFGIGVSMHSNSHLGISLMAMTHVAASVESLSYACDTHYPWQEPDEEVL 360 Query: 361 RGGKLPIRNGCVQITDAPGLGVEVDQEQLRKLHQLYLECGIRQRDDVGQMRKYKPEWKTV 420 RGGKLPIR GCVQ+TDAPGLG+E+D+EQLRKLH+LYL CGIRQRDDVGQMRKY+P+WK + Sbjct: 361 RGGKLPIRGGCVQLTDAPGLGLEIDREQLRKLHELYLGCGIRQRDDVGQMRKYRPDWKNL 420 Query: 421 KPRF 424 KPR+ Sbjct: 421 KPRY 424 >ref|ZP_07774785.1| mandelate racemase/muconate lactonizing enzyme [Pseudomonas fluorescens WH6] gb|EFQ64066.1| mandelate racemase/muconate lactonizing enzyme [Pseudomonas fluorescens WH6] Length = 424 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 360/424 (84%), Positives = 382/424 (90%) Query: 1 MKIARVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL 60 MKI RVTVTPIAF+D PLLNASGIHEP+ALRSIIEIE+D GYIGLGESYGDAPAL I Sbjct: 1 MKIVRVTVTPIAFRDPPLLNASGIHEPFALRSIIEIESDTGYIGLGESYGDAPALAIQQQ 60 Query: 61 VKEQLIGLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD 120 V+ QLIGLDPFNLN LRAIV+ VAA PAS AGAELAPGSHASKAVSNAYSAFEVA LD Sbjct: 61 VQSQLIGLDPFNLNQLRAIVQATVAAHKPASLAGAELAPGSHASKAVSNAYSAFEVAFLD 120 Query: 121 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPDGWGEALSEEQIVAQARK 180 QA LNVPLVDLLGGA+R IPFSAYLFFKYAQHIDSPY PD WGEAL+EEQIVAQAR+ Sbjct: 121 LQAHSLNVPLVDLLGGAIRDHIPFSAYLFFKYAQHIDSPYKPDSWGEALNEEQIVAQARR 180 Query: 181 MIEENGFKSIKLKAGALDPEHEVACIKALKKAFPDAPLRIDPNGNWSLETAIRMADLLGD 240 MIE GFKSIKLKAGAL PEHEVACIKALKKAFPD PLRIDPNGNWSLET+IRMA+LLGD Sbjct: 181 MIETYGFKSIKLKAGALQPEHEVACIKALKKAFPDVPLRIDPNGNWSLETSIRMAELLGD 240 Query: 241 DLQYYEDPTPDLEGMAELHRRTGLPLATNMVVTDFDELRRSVALNSVQIVLADHHYWGGL 300 DLQYYEDPTP L+GMAELH RTGLPLATNMVVTDFDE RRSVALNSVQIVLADHHYWGGL Sbjct: 241 DLQYYEDPTPGLDGMAELHARTGLPLATNMVVTDFDEFRRSVALNSVQIVLADHHYWGGL 300 Query: 301 RDTQQLAKMCDIFGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI 360 RDTQ LAKMC FGLGVSMHSNSHLGISLMAM+HVAA+V NL YACDTHYPWQEPDEEVI Sbjct: 301 RDTQVLAKMCQTFGLGVSMHSNSHLGISLMAMAHVAASVPNLDYACDTHYPWQEPDEEVI 360 Query: 361 RGGKLPIRNGCVQITDAPGLGVEVDQEQLRKLHQLYLECGIRQRDDVGQMRKYKPEWKTV 420 +GGKLPI +GCVQIT APGLG+E+D +QL KLH YL CGIRQRDDV QM++Y+P+WKTV Sbjct: 361 KGGKLPIIDGCVQITRAPGLGLELDHDQLGKLHDQYLSCGIRQRDDVKQMQRYQPDWKTV 420 Query: 421 KPRF 424 KPRF Sbjct: 421 KPRF 424 >ref|ZP_04585756.1| mandelate racemase/muconate lactonizing enzyme family protein [Pseudomonas syringae pv. oryzae str. 1_6] gb|EGI00202.1| mandelate racemase/muconate lactonizing enzyme family protein [Pseudomonas syringae pv. oryzae str. 1_6] Length = 424 Score = 734 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 352/424 (83%), Positives = 383/424 (90%) Query: 1 MKIARVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL 60 MKI RVTVTPIAF+D PLLNASGIHEP+ALRSIIE+ETDNGYIGLGESYGDAPAL I Sbjct: 1 MKITRVTVTPIAFRDPPLLNASGIHEPFALRSIIEVETDNGYIGLGESYGDAPALAIQQQ 60 Query: 61 VKEQLIGLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD 120 V++QLIG+DPFNLN LR+IV+ VAA P S AGAELAPGSHASKAVSNAYSAFEVA LD Sbjct: 61 VQKQLIGVDPFNLNLLRSIVQATVAAHKPFSLAGAELAPGSHASKAVSNAYSAFEVAFLD 120 Query: 121 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPDGWGEALSEEQIVAQARK 180 QAR +N+PLVDLLGGA+R IPFSAYLFFKYAQH D+PYAPD WGEAL+EEQIVAQAR+ Sbjct: 121 VQARSMNLPLVDLLGGAIRDRIPFSAYLFFKYAQHADAPYAPDSWGEALNEEQIVAQARR 180 Query: 181 MIEENGFKSIKLKAGALDPEHEVACIKALKKAFPDAPLRIDPNGNWSLETAIRMADLLGD 240 MIE GFKSIKLKAGALDPEHEV+CIKALKKAFP PLRIDPNGNWSLET+IRMA+LLGD Sbjct: 181 MIEAYGFKSIKLKAGALDPEHEVSCIKALKKAFPGYPLRIDPNGNWSLETSIRMAELLGD 240 Query: 241 DLQYYEDPTPDLEGMAELHRRTGLPLATNMVVTDFDELRRSVALNSVQIVLADHHYWGGL 300 DLQYYEDPTP L+GM+ELH+RTGLPLATNMVVTDFDE RRSVAL+SVQIVLADHHYWGGL Sbjct: 241 DLQYYEDPTPGLDGMSELHKRTGLPLATNMVVTDFDEFRRSVALDSVQIVLADHHYWGGL 300 Query: 301 RDTQQLAKMCDIFGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI 360 RDTQ LAKMCD FGLGVSMHSNSHLGISLMAM+HVAA+V NL YACDTHYPWQEPDEEVI Sbjct: 301 RDTQTLAKMCDTFGLGVSMHSNSHLGISLMAMAHVAASVPNLDYACDTHYPWQEPDEEVI 360 Query: 361 RGGKLPIRNGCVQITDAPGLGVEVDQEQLRKLHQLYLECGIRQRDDVGQMRKYKPEWKTV 420 +GGKLPI +GCV IT APGLG+E+D +QL KL+ Y CGIRQRDDV QM+KYKPEWK V Sbjct: 361 KGGKLPIVDGCVSITRAPGLGLELDYDQLGKLNDQYHSCGIRQRDDVKQMQKYKPEWKAV 420 Query: 421 KPRF 424 KPR+ Sbjct: 421 KPRY 424 >gb|EGH80437.1| mandelate racemase/muconate lactonizing protein [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 424 Score = 733 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 352/424 (83%), Positives = 383/424 (90%) Query: 1 MKIARVTVTPIAFKDGPLLNASGIHEPYALRSIIEIETDNGYIGLGESYGDAPALKILDL 60 MKI RVTVTPIAF+D PLLNASGIHEP+ALRSIIE+E+DNGYIGLGESYGDAPAL I Sbjct: 1 MKIIRVTVTPIAFRDPPLLNASGIHEPFALRSIIEVESDNGYIGLGESYGDAPALAIQQQ 60 Query: 61 VKEQLIGLDPFNLNGLRAIVRGVVAAMAPASNAGAELAPGSHASKAVSNAYSAFEVACLD 120 V+ QLIGLDPFNLN LR+IV+ VAA PAS AGAELAPGSHASKAVSNAYSAFEVA LD Sbjct: 61 VQNQLIGLDPFNLNQLRSIVKATVAAHKPASLAGAELAPGSHASKAVSNAYSAFEVAFLD 120 Query: 121 AQARYLNVPLVDLLGGAVRKEIPFSAYLFFKYAQHIDSPYAPDGWGEALSEEQIVAQARK 180 QAR +N+PLVDLLGGA+R +IPFSAYLFFKYAQH D+PYAPD WGEALSEEQIVAQAR+ Sbjct: 121 LQARSMNLPLVDLLGGAIRDQIPFSAYLFFKYAQHADTPYAPDSWGEALSEEQIVAQARR 180 Query: 181 MIEENGFKSIKLKAGALDPEHEVACIKALKKAFPDAPLRIDPNGNWSLETAIRMADLLGD 240 MIE GFKSIKLKAGAL PEHEV+CIKALKKAFP PLRIDPNGNWSLET+IRMA+LLGD Sbjct: 181 MIEAYGFKSIKLKAGALQPEHEVSCIKALKKAFPGYPLRIDPNGNWSLETSIRMAELLGD 240 Query: 241 DLQYYEDPTPDLEGMAELHRRTGLPLATNMVVTDFDELRRSVALNSVQIVLADHHYWGGL 300 DLQYYEDPTP L+GM+ELH+RTGLPLATNMVVTDFDE RRSVAL+SVQIVLADHHYWGGL Sbjct: 241 DLQYYEDPTPGLDGMSELHKRTGLPLATNMVVTDFDEFRRSVALDSVQIVLADHHYWGGL 300 Query: 301 RDTQQLAKMCDIFGLGVSMHSNSHLGISLMAMSHVAAAVENLSYACDTHYPWQEPDEEVI 360 RDTQ LAKMCD FGLGVSMHSNSHLGISLMAM+HVAA+V NL YACDTHYPWQEPDEEVI Sbjct: 301 RDTQALAKMCDTFGLGVSMHSNSHLGISLMAMAHVAASVPNLDYACDTHYPWQEPDEEVI 360 Query: 361 RGGKLPIRNGCVQITDAPGLGVEVDQEQLRKLHQLYLECGIRQRDDVGQMRKYKPEWKTV 420 +GGKLPI +GCV IT APGLG+E+D +QL KL+ Y CGIRQRDDV QM+KYKP+WK V Sbjct: 361 KGGKLPIVDGCVSITRAPGLGLELDYDQLGKLNDQYHSCGIRQRDDVKQMQKYKPDWKAV 420 Query: 421 KPRF 424 KPR+ Sbjct: 421 KPRY 424