BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.3003.p         (86 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774990.1| acyl coenzyme A thioester hydrolase [Herbasp...   155   2e-36
ref|YP_995616.1| palmitoyl-CoA hydrolase [Verminephrobacter eise...   107   6e-22
ref|YP_003979794.1| BAAT/acyl-CoA thioester hydrolase family pro...   102   2e-20
ref|ZP_06688341.1| conserved hypothetical protein [Achromobacter...   102   2e-20
ref|YP_004126023.1| palmitoyl-CoA hydrolase [Alicycliphilus deni...   101   4e-20

>ref|YP_003774990.1| acyl coenzyme A thioester hydrolase [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63082.1| acyl coenzyme A thioester hydrolase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 443

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 76/86 (88%), Positives = 82/86 (95%)

Query: 1   MVKDKLAEVSHPWPVVWRNYAHAGHSILFPFVPTTQTTYAHPVSGRISTGGGEPAANARA 60
           MV+DKLAEV+HPWPV+WRNYA+AGHSILFPFVPTTQTTYAHPVSGRISTGGGE AANARA
Sbjct: 358 MVRDKLAEVAHPWPVLWRNYANAGHSILFPFVPTTQTTYAHPVSGRISTGGGEAAANARA 417

Query: 61  DLDAWQQAQHFLRDALARHSSTKENA 86
           DLD+WQQAQHFLRDAL RHSS KE +
Sbjct: 418 DLDSWQQAQHFLRDALTRHSSPKETS 443


>ref|YP_995616.1| palmitoyl-CoA hydrolase [Verminephrobacter eiseniae EF01-2]
 gb|ABM56598.1| Palmitoyl-CoA hydrolase [Verminephrobacter eiseniae EF01-2]
          Length = 450

 Score =  107 bits (267), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/77 (67%), Positives = 62/77 (80%)

Query: 1   MVKDKLAEVSHPWPVVWRNYAHAGHSILFPFVPTTQTTYAHPVSGRISTGGGEPAANARA 60
           MV DKL EV+HP+ V W +Y  AGH+ILFP+VPTTQ +YAHPVS RI TGGG PAANA+A
Sbjct: 360 MVNDKLKEVAHPYAVEWHDYRDAGHAILFPYVPTTQISYAHPVSQRIHTGGGTPAANAQA 419

Query: 61  DLDAWQQAQHFLRDALA 77
           D  AWQ AQ FL++A+A
Sbjct: 420 DHHAWQHAQQFLKNAIA 436


>ref|YP_003979794.1| BAAT/acyl-CoA thioester hydrolase family protein 1 [Achromobacter
           xylosoxidans A8]
 gb|ADP17079.1| BAAT/Acyl-CoA thioester hydrolase family protein 1 [Achromobacter
           xylosoxidans A8]
          Length = 435

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/72 (65%), Positives = 58/72 (80%)

Query: 1   MVKDKLAEVSHPWPVVWRNYAHAGHSILFPFVPTTQTTYAHPVSGRISTGGGEPAANARA 60
           MV+DKLAEV+HP+PV W +Y + GHSILFP+VPTTQ  YAHPVSG+IST GG P  NARA
Sbjct: 350 MVQDKLAEVNHPYPVEWLDYENGGHSILFPYVPTTQLVYAHPVSGKISTSGGNPKDNARA 409

Query: 61  DLDAWQQAQHFL 72
           D ++W+  + FL
Sbjct: 410 DQESWEGVKRFL 421


>ref|ZP_06688341.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gb|EFF74735.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 120

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/72 (65%), Positives = 57/72 (79%)

Query: 1   MVKDKLAEVSHPWPVVWRNYAHAGHSILFPFVPTTQTTYAHPVSGRISTGGGEPAANARA 60
           MV+DKLAEV HP+PV W +Y + GHSILFP+VPTTQ  YAHPVSG+IST GG P  NARA
Sbjct: 31  MVQDKLAEVKHPYPVQWLDYENGGHSILFPYVPTTQLVYAHPVSGKISTSGGNPKDNARA 90

Query: 61  DLDAWQQAQHFL 72
           D ++W+  + FL
Sbjct: 91  DQESWEGVKKFL 102


>ref|YP_004126023.1| palmitoyl-CoA hydrolase [Alicycliphilus denitrificans BC]
 ref|YP_004389398.1| Palmitoyl-CoA hydrolase [Alicycliphilus denitrificans K601]
 gb|ADU99135.1| Palmitoyl-CoA hydrolase [Alicycliphilus denitrificans BC]
 gb|AEB85882.1| Palmitoyl-CoA hydrolase [Alicycliphilus denitrificans K601]
          Length = 435

 Score =  101 bits (251), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 50/83 (60%), Positives = 62/83 (74%)

Query: 1   MVKDKLAEVSHPWPVVWRNYAHAGHSILFPFVPTTQTTYAHPVSGRISTGGGEPAANARA 60
           MV+DKLAEV HP  V W ++ +AGH+ILFP VPTTQ  YAHPVSG++STGGG PA NARA
Sbjct: 351 MVRDKLAEVRHPHDVQWLDFENAGHAILFPCVPTTQLVYAHPVSGKVSTGGGNPADNARA 410

Query: 61  DLDAWQQAQHFLRDALARHSSTK 83
           D  +W     FLRDA+A   +++
Sbjct: 411 DEQSWAGVLQFLRDAVAARGASQ 433