BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2991.p (232 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774980.1| metal ion ABC transporter permease [Herbaspi... 300 1e-79 ref|YP_002355103.1| binding-protein-dependent transporters inner... 248 6e-64 ref|YP_004752201.1| methionine ABC transporter permease [Collimo... 244 7e-63 gb|ADP99668.1| binding-protein-dependent transport systems inner... 240 1e-61 ref|ZP_01895574.1| Binding-protein-dependent transport systems i... 239 2e-61 >ref|YP_003774980.1| metal ion ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63072.1| ABC-type metal ion transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 229 Score = 300 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 218/229 (95%), Positives = 223/229 (97%) Query: 4 LSSLSALVGQIDLSVIDWSEVGDATVETLAMTGGSLFFTVFLGLPLGILLFLTNRGQLLE 63 +S+LS+L QIDLSVIDW EVGDAT+ETLAMTGGSLFFTV LGLPLGILLFLTNR QLLE Sbjct: 1 MSALSSLFSQIDLSVIDWGEVGDATLETLAMTGGSLFFTVLLGLPLGILLFLTNRRQLLE 60 Query: 64 QRGLYWVLSLVVNVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLT 123 QRGLY VLSLVVNVLRSVPFLILLI+LIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLT Sbjct: 61 QRGLYLVLSLVVNVLRSVPFLILLIMLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLT 120 Query: 124 ESVLREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIG 183 ESVLREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIG Sbjct: 121 ESVLREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIG 180 Query: 184 GGGLGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 GGGLGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK Sbjct: 181 GGGLGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 229 >ref|YP_002355103.1| binding-protein-dependent transporters inner membrane component [Thauera sp. MZ1T] gb|ACK54207.1| binding-protein-dependent transport systems inner membrane component [Thauera sp. MZ1T] Length = 219 Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 172/219 (78%), Positives = 196/219 (89%) Query: 14 IDLSVIDWSEVGDATVETLAMTGGSLFFTVFLGLPLGILLFLTNRGQLLEQRGLYWVLSL 73 +DLSVIDWS++ AT ETL MTG SL FT+ LGLPLGILLF+T R QLLEQ +Y VLS Sbjct: 1 MDLSVIDWSDIWIATWETLVMTGVSLLFTILLGLPLGILLFVTARRQLLEQGFVYTVLSF 60 Query: 74 VVNVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRG 133 VVNVLRSVPFLILLI++IP T+ L+GTSLGV GAIPPLV+GTAPFFARL E+VLRE+DRG Sbjct: 61 VVNVLRSVPFLILLIVMIPVTVILIGTSLGVEGAIPPLVVGTAPFFARLVENVLREVDRG 120 Query: 134 ILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIR 193 ++EAC AMG R +IIFGALLPEALPGL+AAVT+TAITLMSYAAMSGVIGGGGLGDLAIR Sbjct: 121 VIEACQAMGIRTHRIIFGALLPEALPGLIAAVTVTAITLMSYAAMSGVIGGGGLGDLAIR 180 Query: 194 YGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 +GYQRFQTEVMV+TVA+LVVLVQ++Q+ GDRLVL FTRK Sbjct: 181 FGYQRFQTEVMVITVALLVVLVQIIQYSGDRLVLYFTRK 219 >ref|YP_004752201.1| methionine ABC transporter permease [Collimonas fungivorans Ter331] gb|AEK61378.1| Methionine ABC transporter permease protein [Collimonas fungivorans Ter331] Length = 219 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 174/219 (79%), Positives = 194/219 (88%) Query: 14 IDLSVIDWSEVGDATVETLAMTGGSLFFTVFLGLPLGILLFLTNRGQLLEQRGLYWVLSL 73 +D S+IDW ++ AT ETLAMTG SL FT+ LGLPLGILLF+T + QLLEQRG+Y LSL Sbjct: 1 MDFSLIDWGDIWQATWETLAMTGFSLLFTILLGLPLGILLFITGKRQLLEQRGIYRALSL 60 Query: 74 VVNVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRG 133 VVNVLRSVPFLILLI++IP T+ LVGTSLGV GAIPPLV+GTAPFFARL E+VLREIDRG Sbjct: 61 VVNVLRSVPFLILLIVMIPVTVILVGTSLGVQGAIPPLVLGTAPFFARLVENVLREIDRG 120 Query: 134 ILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIR 193 ++EAC AMGA +RQIIFGALLPEALPGL+AA T+TAI LMSYAAMSGVIGGGGLGDLAIR Sbjct: 121 VVEACQAMGANKRQIIFGALLPEALPGLIAATTVTAIALMSYAAMSGVIGGGGLGDLAIR 180 Query: 194 YGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 +GYQRFQTEVMV TVA+LVVLVQ LQF GDRLV FTRK Sbjct: 181 FGYQRFQTEVMVTTVAVLVVLVQALQFSGDRLVQHFTRK 219 >gb|ADP99668.1| binding-protein-dependent transport systems inner membrane component [Marinobacter adhaerens HP15] Length = 221 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 155/217 (71%), Positives = 186/217 (85%) Query: 16 LSVIDWSEVGDATVETLAMTGGSLFFTVFLGLPLGILLFLTNRGQLLEQRGLYWVLSLVV 75 LS +DW+E+G A+ +TL M G SL F+V +GLP+G+LLFL + QLLEQ Y VLS VV Sbjct: 5 LSNVDWTEIGWASWDTLVMVGMSLLFSVLIGLPIGVLLFLFGKRQLLEQPVAYAVLSFVV 64 Query: 76 NVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESVLREIDRGIL 135 NVLRSVPF+ILLI++IPFT+ L+GTSLGV GAIPPLV G APFFARL E+ LRE+DRGI+ Sbjct: 65 NVLRSVPFIILLIVMIPFTVMLIGTSLGVAGAIPPLVAGGAPFFARLVETSLREVDRGII 124 Query: 136 EACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGGLGDLAIRYG 195 EA AMGA +QIIFGALLPEALPG++A +T+TAITL+SYAAMSGVIGGGGLGDLAIR+G Sbjct: 125 EATQAMGASVKQIIFGALLPEALPGIIAGITVTAITLVSYAAMSGVIGGGGLGDLAIRFG 184 Query: 196 YQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 YQRFQT+VMV+TVA+LV+ VQ+LQ GDRLVL F+RK Sbjct: 185 YQRFQTDVMVITVALLVIFVQVLQMVGDRLVLYFSRK 221 >ref|ZP_01895574.1| Binding-protein-dependent transport systems inner membrane component [Marinobacter algicola DG893] gb|EDM46338.1| Binding-protein-dependent transport systems inner membrane component [Marinobacter algicola DG893] Length = 225 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 157/226 (69%), Positives = 192/226 (84%), Gaps = 1/226 (0%) Query: 7 LSALVGQIDLSVIDWSEVGDATVETLAMTGGSLFFTVFLGLPLGILLFLTNRGQLLEQRG 66 + AL+G + LS +DW+E+G A+ +TL M G SL F+V +GLP+G+LLFL + QLLEQ Sbjct: 1 MEALMGDL-LSNVDWTEIGWASWDTLVMVGMSLLFSVLIGLPVGVLLFLFGKRQLLEQPI 59 Query: 67 LYWVLSLVVNVLRSVPFLILLILLIPFTLWLVGTSLGVTGAIPPLVIGTAPFFARLTESV 126 Y VLS VVNVLRSVPF+ILLI++IPFT+ L+GTSLGV GAIPPLV G APFFARL E+ Sbjct: 60 AYAVLSFVVNVLRSVPFIILLIVMIPFTVMLIGTSLGVAGAIPPLVAGGAPFFARLVETS 119 Query: 127 LREIDRGILEACTAMGARRRQIIFGALLPEALPGLLAAVTITAITLMSYAAMSGVIGGGG 186 LRE+DRGI+EA AMGA +QI+FGALLPEALPG++A +T+TAITL+SYAAMSGV+GGGG Sbjct: 120 LREVDRGIIEATQAMGATVKQIVFGALLPEALPGIIAGITVTAITLVSYAAMSGVVGGGG 179 Query: 187 LGDLAIRYGYQRFQTEVMVVTVAILVVLVQLLQFFGDRLVLRFTRK 232 LGDLAIR+GYQRFQT+VMV+TVA+LV+ VQLLQ GDRLVL F+RK Sbjct: 180 LGDLAIRFGYQRFQTDVMVITVALLVIFVQLLQMAGDRLVLYFSRK 225