BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2980.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001142704.1| hypothetical protein ASA_2953 [Aeromonas sal... 573 e-161 ref|ZP_04637812.1| hypothetical protein yinte0001_3730 [Yersinia... 568 e-160 ref|ZP_04641690.1| hypothetical protein ymoll0001_32260 [Yersini... 536 e-150 ref|YP_001242666.1| hypothetical protein BBta_6873 [Bradyrhizobi... 535 e-150 ref|ZP_06886813.1| conserved hypothetical protein [Methylosinus ... 533 e-149 >ref|YP_001142704.1| hypothetical protein ASA_2953 [Aeromonas salmonicida subsp. salmonicida A449] gb|ABO90956.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 404 Score = 573 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 290/404 (71%), Positives = 339/404 (83%), Gaps = 5/404 (1%) Query: 6 MRAGMVLGALSTMLSILPVAASAQAPATPAVQAVASGVRYQLIGRWDVDRLNSILQKDTP 65 MR + LG + +L I A AQ + VQ V SGV+YQLI RWD D+LN IL +DTP Sbjct: 1 MRNWIRLGIFTLLLHIGVSPAFAQQ--SEPVQ-VTSGVQYQLIARWDQDQLNKILTRDTP 57 Query: 66 AFSGVPVNYSPARNAVRLYRITYPSVIPERGNQPILASGLLALPDTPAKSYSLVSYQHGT 125 AF+G+ V+Y+PARNAVRLYRI+Y SVIPE GN+P +ASGLLA+PDT + + VSYQHGT Sbjct: 58 AFAGITVSYTPARNAVRLYRISYHSVIPEMGNKPTVASGLLAVPDTGGQDFPTVSYQHGT 117 Query: 126 VYERQQVPSFPEQSPETQLMIAQFAGQGYALIGADYFGMGISSEPEGYMVKGSHQQATYD 185 VY +VPSF +QSPETQLMIAQFAGQGY LIGADYFG+G S+EPEGYMVKGSHQQAT+D Sbjct: 118 VYGHNEVPSFADQSPETQLMIAQFAGQGYLLIGADYFGLGTSTEPEGYMVKGSHQQATFD 177 Query: 186 MLMASRSVLSSMGVASDKLFLSGWSQGGFVTMAFLEKLEAAGVKVDAATTASAPLDVFAL 245 +LMASR+VL+ M + SDKLFL+GWSQGGFVTMAFLEKLEAAGVKVD A ASAPLDV+AL Sbjct: 178 LLMASRAVLAHMQIVSDKLFLAGWSQGGFVTMAFLEKLEAAGVKVDGA--ASAPLDVYAL 235 Query: 246 LEGFLTFPRPNDAAWLNSIVILSAFAFENYYGVPGLARSVLTDAAYPVAKNAYDRQPFNV 305 ++GFL +PR DA WLNSI+ILS+FA+E+YYG+PGLARS+LTD Y +AK AYDR+PFN Sbjct: 236 MQGFLVYPRKFDAVWLNSIMILSSFAYEHYYGIPGLARSLLTDEYYDIAKKAYDREPFNP 295 Query: 306 ADIPTDLHKLMRPEYFDPQYFARSAYGRLIATTQAYRWVIRSDVRNYYGETDEAITPGVG 365 +DI TDLHKL+RP YFDP YFA SA+G+LI + AYRWVI+S VRNYYGETDEAITPGVG Sbjct: 296 SDITTDLHKLIRPAYFDPHYFANSAFGKLIGSAHAYRWVIQSPVRNYYGETDEAITPGVG 355 Query: 366 RMAMTYAQAMGSGNTRVQAVSTGPTTHRGTFATAVPAWKRWFDE 409 RMAMTYAQ+MGSGN V+A+STGPTTHRGTFATAVP WK WFD+ Sbjct: 356 RMAMTYAQSMGSGNQNVEAISTGPTTHRGTFATAVPQWKAWFDK 399 >ref|ZP_04637812.1| hypothetical protein yinte0001_3730 [Yersinia intermedia ATCC 29909] gb|EEQ18026.1| hypothetical protein yinte0001_3730 [Yersinia intermedia ATCC 29909] Length = 404 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 273/372 (73%), Positives = 318/372 (85%) Query: 39 VASGVRYQLIGRWDVDRLNSILQKDTPAFSGVPVNYSPARNAVRLYRITYPSVIPERGNQ 98 V++G+ Y+LIGRWDV+RLN IL DTP FSG+ V Y+ ARNAV LYR+TY SVIPE+GN+ Sbjct: 32 VSNGITYELIGRWDVERLNKILNTDTPKFSGIDVKYTQARNAVNLYRVTYHSVIPEKGNK 91 Query: 99 PILASGLLALPDTPAKSYSLVSYQHGTVYERQQVPSFPEQSPETQLMIAQFAGQGYALIG 158 P + SGLLA+P T KS+ LVSYQHGTVY + QVPSFPE+SPETQLMIAQFAGQGY +IG Sbjct: 92 PTVTSGLLAVPVTADKSFPLVSYQHGTVYGKHQVPSFPEESPETQLMIAQFAGQGYLVIG 151 Query: 159 ADYFGMGISSEPEGYMVKGSHQQATYDMLMASRSVLSSMGVASDKLFLSGWSQGGFVTMA 218 ADYFG+GISSEPEGYMVKGSHQQATYD+L+A++SVL MG+++ LFL+GWSQGGFVTMA Sbjct: 152 ADYFGLGISSEPEGYMVKGSHQQATYDLLIAAQSVLQQMGLSNKNLFLAGWSQGGFVTMA 211 Query: 219 FLEKLEAAGVKVDAATTASAPLDVFALLEGFLTFPRPNDAAWLNSIVILSAFAFENYYGV 278 LEKLE GV V TASAPLDVFAL+EGFL FPR +DA WLNSI+ILSAFA+ENYYGV Sbjct: 212 LLEKLENIGVPVQGTATASAPLDVFALMEGFLVFPRKSDANWLNSIMILSAFAYENYYGV 271 Query: 279 PGLARSVLTDAAYPVAKNAYDRQPFNVADIPTDLHKLMRPEYFDPQYFARSAYGRLIATT 338 PGLA S++ D Y VAK AY+RQPFN DIP DLHKL+R EYFDPQ+FA S +GRLI++ Sbjct: 272 PGLAHSLINDEYYDVAKKAYERQPFNADDIPVDLHKLIRAEYFDPQFFAASTFGRLISSA 331 Query: 339 QAYRWVIRSDVRNYYGETDEAITPGVGRMAMTYAQAMGSGNTRVQAVSTGPTTHRGTFAT 398 Q+YRWVI+S V NYYGE+DEAIT GVGRMAMTYAQ+MGSGN+ V+A+STGPTTHRGTFA+ Sbjct: 332 QSYRWVIKSPVHNYYGESDEAITVGVGRMAMTYAQSMGSGNSLVEAISTGPTTHRGTFAS 391 Query: 399 AVPAWKRWFDEK 410 AVP WK WFD K Sbjct: 392 AVPQWKTWFDTK 403 >ref|ZP_04641690.1| hypothetical protein ymoll0001_32260 [Yersinia mollaretii ATCC 43969] gb|EEQ09771.1| hypothetical protein ymoll0001_32260 [Yersinia mollaretii ATCC 43969] Length = 377 Score = 536 bits (1382), Expect = e-150, Method: Composition-based stats. Identities = 266/370 (71%), Positives = 310/370 (83%) Query: 39 VASGVRYQLIGRWDVDRLNSILQKDTPAFSGVPVNYSPARNAVRLYRITYPSVIPERGNQ 98 V S VR++LIG WD RLN ILQ++TP FSGV V YSPA N V+LYR+TYPSVIPERGN+ Sbjct: 4 VPSEVRFELIGHWDQARLNKILQQETPEFSGVTVKYSPATNGVQLYRVTYPSVIPERGNK 63 Query: 99 PILASGLLALPDTPAKSYSLVSYQHGTVYERQQVPSFPEQSPETQLMIAQFAGQGYALIG 158 P +ASGLLA+PD A + +VSYQHGTVY +QQVPSFPEQSPET LMIAQFAGQGY +IG Sbjct: 64 PTVASGLLAIPDIKATTLPMVSYQHGTVYGKQQVPSFPEQSPETALMIAQFAGQGYVVIG 123 Query: 159 ADYFGMGISSEPEGYMVKGSHQQATYDMLMASRSVLSSMGVASDKLFLSGWSQGGFVTMA 218 ADYFGMG SSEPEGYMVKGSHQQA+YDML ASR+VL M +++ KLFL+GWSQGGFVTMA Sbjct: 124 ADYFGMGESSEPEGYMVKGSHQQASYDMLQASRAVLKQMQISTPKLFLAGWSQGGFVTMA 183 Query: 219 FLEKLEAAGVKVDAATTASAPLDVFALLEGFLTFPRPNDAAWLNSIVILSAFAFENYYGV 278 FLEKLE V AA TASAP D+F L GFL FPR NDA W+ ++ ILSAF+FE+YYGV Sbjct: 184 FLEKLEQIKEPVLAAVTASAPTDIFMTLSGFLNFPRKNDADWVPTLFILSAFSFEHYYGV 243 Query: 279 PGLARSVLTDAAYPVAKNAYDRQPFNVADIPTDLHKLMRPEYFDPQYFARSAYGRLIATT 338 PGLARSV+ D Y VA+NAY+++PFN ADIPTDLHKL+R EYFDPQ+FA SAYGRLIA T Sbjct: 244 PGLARSVINDDYYEVARNAYEKKPFNAADIPTDLHKLVRAEYFDPQFFAASAYGRLIADT 303 Query: 339 QAYRWVIRSDVRNYYGETDEAITPGVGRMAMTYAQAMGSGNTRVQAVSTGPTTHRGTFAT 398 QAYRWVI++ V+NYYGE DEAI+ G+G++ MTY QAMG+GN +VQA+STG T+HRGTFA+ Sbjct: 304 QAYRWVIKTSVKNYYGEADEAISVGLGKLPMTYQQAMGNGNPQVQAISTGQTSHRGTFAS 363 Query: 399 AVPAWKRWFD 408 AVP WK FD Sbjct: 364 AVPQWKMVFD 373 >ref|YP_001242666.1| hypothetical protein BBta_6873 [Bradyrhizobium sp. BTAi1] gb|ABQ38760.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 401 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 277/387 (71%), Positives = 323/387 (83%), Gaps = 3/387 (0%) Query: 23 PVAASAQAPATPAVQAVASGVRYQLIGRWDVDRLNSILQKDTPAFSGVPVNYSPARNAVR 82 PVA+ AQ V V S V Y+ + RWD DRLN IL DTP F+GV V+Y+PA NAVR Sbjct: 17 PVASLAQ---DKGVVRVTSDVSYEFLARWDTDRLNKILTIDTPKFAGVTVSYTPAVNAVR 73 Query: 83 LYRITYPSVIPERGNQPILASGLLALPDTPAKSYSLVSYQHGTVYERQQVPSFPEQSPET 142 LYRITY SV+PERGN+PI A+GLLA+P+ S +VSYQHGTVY +Q+VPSFPEQSPET Sbjct: 74 LYRITYASVVPERGNKPIRATGLLAVPEITETSLPMVSYQHGTVYGKQEVPSFPEQSPET 133 Query: 143 QLMIAQFAGQGYALIGADYFGMGISSEPEGYMVKGSHQQATYDMLMASRSVLSSMGVASD 202 QLMIAQFAGQG+ LIGADYFGMG S+EPEGYMVK SHQQATYDML+ASR+VL+ M + Sbjct: 134 QLMIAQFAGQGHLLIGADYFGMGTSTEPEGYMVKASHQQATYDMLIASRAVLNDMHLTPT 193 Query: 203 KLFLSGWSQGGFVTMAFLEKLEAAGVKVDAATTASAPLDVFALLEGFLTFPRPNDAAWLN 262 +L ++GWSQGGFVTMAFLEKLE+AGV V AA TASAP+DVF L GFL FPR NDA+W+N Sbjct: 194 RLSIAGWSQGGFVTMAFLEKLESAGVPVAAAATASAPVDVFVALNGFLNFPRSNDASWVN 253 Query: 263 SIVILSAFAFENYYGVPGLARSVLTDAAYPVAKNAYDRQPFNVADIPTDLHKLMRPEYFD 322 S+ ILSAFAFENYY VPGLARSV+ D Y VA+ AY+RQPFNVADIPTDLHKL++P+YFD Sbjct: 254 SLFILSAFAFENYYAVPGLARSVIADTYYDVARKAYERQPFNVADIPTDLHKLLKPDYFD 313 Query: 323 PQYFARSAYGRLIATTQAYRWVIRSDVRNYYGETDEAITPGVGRMAMTYAQAMGSGNTRV 382 QYFA S+YGRL+A TQAYRW+I+S VRNYYGE DEAI+ G+GR+AMTY QA+G+GN +V Sbjct: 314 AQYFAASSYGRLVAQTQAYRWIIKSPVRNYYGENDEAISVGLGRLAMTYQQAIGAGNGKV 373 Query: 383 QAVSTGPTTHRGTFATAVPAWKRWFDE 409 +AVSTGPTTHRGTFATAVP WK WFD+ Sbjct: 374 EAVSTGPTTHRGTFATAVPQWKAWFDK 400 >ref|ZP_06886813.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] gb|EFH04584.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] Length = 407 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 278/383 (72%), Positives = 322/383 (84%), Gaps = 1/383 (0%) Query: 28 AQAPATPAVQAVASGVRYQLIGRWDVDRLNSILQKDTPAFSGVPVNYSPARNAVRLYRIT 87 A AP V+ ++SGV Y+LI WDV RL+ IL DTP F+GV V+Y+PARNAV LYRIT Sbjct: 26 AAAPRNGPVR-LSSGVSYELIAHWDVKRLDHILDADTPKFAGVKVSYTPARNAVSLYRIT 84 Query: 88 YPSVIPERGNQPILASGLLALPDTPAKSYSLVSYQHGTVYERQQVPSFPEQSPETQLMIA 147 Y SVIPE+GNQP +ASGLLA+PDT A S L+SYQHGT+Y R +VPSFPE+SPETQLMIA Sbjct: 85 YSSVIPEKGNQPTIASGLLAVPDTKATSLPLLSYQHGTIYGRHEVPSFPEESPETQLMIA 144 Query: 148 QFAGQGYALIGADYFGMGISSEPEGYMVKGSHQQATYDMLMASRSVLSSMGVASDKLFLS 207 QFAGQGYA+IGADYFG+G+S EPEGY+VK SHQQA YD+L+ASRSVL + + S+KLFLS Sbjct: 145 QFAGQGYAVIGADYFGLGVSQEPEGYLVKASHQQACYDLLVASRSVLEHLKLNSEKLFLS 204 Query: 208 GWSQGGFVTMAFLEKLEAAGVKVDAATTASAPLDVFALLEGFLTFPRPNDAAWLNSIVIL 267 GWSQGGFVTMAFLEKLE+AGV V AA TASAPLD+FA +EGFL +PRPNDA WLNSI IL Sbjct: 205 GWSQGGFVTMAFLEKLESAGVPVAAAATASAPLDLFAAMEGFLVYPRPNDAVWLNSIFIL 264 Query: 268 SAFAFENYYGVPGLARSVLTDAAYPVAKNAYDRQPFNVADIPTDLHKLMRPEYFDPQYFA 327 SAF++ENYYGVPGLARS+ + +Y +A+ AY+RQP + A +PTDL KL+RP YFDP YFA Sbjct: 265 SAFSYENYYGVPGLARSLFAEDSYDIAQKAYERQPIDPAAVPTDLRKLIRPAYFDPHYFA 324 Query: 328 RSAYGRLIATTQAYRWVIRSDVRNYYGETDEAITPGVGRMAMTYAQAMGSGNTRVQAVST 387 S++GRLIA TQAYRWVI+S VRNYYGE DEAIT GVGRMAMTYAQAMG GN V+AVST Sbjct: 325 ASSFGRLIAATQAYRWVIKSPVRNYYGEADEAITQGVGRMAMTYAQAMGRGNPLVEAVST 384 Query: 388 GPTTHRGTFATAVPAWKRWFDEK 410 GPT+HRGTFATA P WK WFD K Sbjct: 385 GPTSHRGTFATATPRWKEWFDGK 407