BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2960.p (170 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001762229.1| hypothetical protein Swoo_3876 [Shewanella w... 174 5e-42 ref|YP_003494528.1| hypothetical protein SCAB_90761 [Streptomyce... 158 3e-37 ref|ZP_06577400.1| conserved hypothetical protein [Streptomyces ... 158 3e-37 ref|ZP_06915105.1| conserved hypothetical protein [Streptomyces ... 157 7e-37 ref|YP_004147878.1| hypothetical protein Psesu_2822 [Pseudoxanth... 152 2e-35 >ref|YP_001762229.1| hypothetical protein Swoo_3876 [Shewanella woodyi ATCC 51908] gb|ACA88134.1| hypothetical protein Swoo_3876 [Shewanella woodyi ATCC 51908] Length = 169 Score = 174 bits (440), Expect = 5e-42, Method: Composition-based stats. Identities = 83/165 (50%), Positives = 112/165 (67%), Gaps = 1/165 (0%) Query: 7 FPDLLAQVNRLEYDYADGDGIEFEPYDEFLPTGETERWFRAWTGNSTADASCFRVFGQDA 66 FP++L +++ +E DYADG+GI+FEP+DEF ET W +AWTGN T D + + ++GQD Sbjct: 5 FPEILKKLHEIEIDYADGEGIDFEPFDEFYSEEETSDWIKAWTGNDTLDGNEYLIYGQDG 64 Query: 67 TGGYAAFWTVRPDADLLEQPVVFMGSEGQTAVVARHFRDYLWLLAAGLGPLEATCFPEEP 126 TGGY AFW VR +ADLLEQP+VF GSEG+ VVA+ F DY+WL A G+GP EA +P+ Sbjct: 65 TGGYVAFWCVRKNADLLEQPIVFFGSEGEVGVVAQSFSDYVWLFANGIGPYEAVAYPDLE 124 Query: 127 RIAQPQLAEFASKNAAPSR-TASDVMEDANNEFPTFHQFIESQCR 170 R FA++ A S+ TAS ++E A EFP F I+ C+ Sbjct: 125 RPKSQDFIRFATEYAPSSKSTASQIVEKAKAEFPDFEGIIDRLCQ 169 >ref|YP_003494528.1| hypothetical protein SCAB_90761 [Streptomyces scabiei 87.22] emb|CBG76007.1| hypothetical protein SCAB_90761 [Streptomyces scabiei 87.22] Length = 175 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 82/168 (48%), Positives = 105/168 (62%), Gaps = 1/168 (0%) Query: 4 ETRFPDLLAQVNRLEYDYADGDGIEFEPYDEFLPTGETERWFRAWTGNSTADASCFRVFG 63 + RF LA V ++E+DY +G+G++FEPYD F ET W R WTGN D +RVFG Sbjct: 8 DRRFLPALAAVAQVEFDYDNGEGVDFEPYDAFDSAEETTDWIRNWTGNHELDGDAYRVFG 67 Query: 64 QDATGGYAAFWTVRPDADLLEQPVVFMGSEGQTAVVARHFRDYLWLLAAGLGPLEATCFP 123 QD TGG A W VRP L EQPVVFMGSEG+ VVA + D+LWLLA GLGP+E + Sbjct: 68 QDGTGGLVALWRVRPGRPLAEQPVVFMGSEGERGVVAVNLSDFLWLLADGLGPMEVVEYE 127 Query: 124 EEPRIAQPQLAEFASKNAAPS-RTASDVMEDANNEFPTFHQFIESQCR 170 + P L E A ++A + R A D++ +A EFPTF ++S CR Sbjct: 128 QREARPNPALTELAERHATTARRPARDIITEAQAEFPTFSDDLDSLCR 175 >ref|ZP_06577400.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gb|EFE67861.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 175 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 85/165 (51%), Positives = 103/165 (62%), Gaps = 1/165 (0%) Query: 7 FPDLLAQVNRLEYDYADGDGIEFEPYDEFLPTGETERWFRAWTGNSTADASCFRVFGQDA 66 P LA V R E+DYADG+GI+FEPYD F ET W R WTGN D +RVFGQD Sbjct: 11 LPPALADVARAEFDYADGEGIDFEPYDAFDSAEETTDWLRQWTGNPELDGDAYRVFGQDG 70 Query: 67 TGGYAAFWTVRPDADLLEQPVVFMGSEGQTAVVARHFRDYLWLLAAGLGPLEATCFPEEP 126 TGG AAFW RP L+EQPVVFMGSEG+ VVA + D+LW+LA G GPLEA + + Sbjct: 71 TGGLAAFWYGRPGRPLVEQPVVFMGSEGECGVVAGNLFDFLWVLADGCGPLEAVLYEDRE 130 Query: 127 RIAQPQLAEFASKNA-APSRTASDVMEDANNEFPTFHQFIESQCR 170 L A ++A P R A D++ +A EFPTF + I+ CR Sbjct: 131 PRPDAALTALAERHATTPRRPARDIIAEARAEFPTFAEDIDGLCR 175 >ref|ZP_06915105.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gb|EDY61450.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 224 Score = 157 bits (396), Expect = 7e-37, Method: Composition-based stats. Identities = 80/158 (50%), Positives = 102/158 (64%), Gaps = 1/158 (0%) Query: 7 FPDLLAQVNRLEYDYADGDGIEFEPYDEFLPTGETERWFRAWTGNSTADASCFRVFGQDA 66 FP LA++ +E+DY DG+G++FEPYD F ET W R WTGN D +RVFGQD Sbjct: 11 FPPALAELAGVEFDYDDGEGVDFEPYDAFDSAEETTDWLRHWTGNHELDGDAYRVFGQDG 70 Query: 67 TGGYAAFWTVRPDADLLEQPVVFMGSEGQTAVVARHFRDYLWLLAAGLGPLEATCFPEEP 126 TGG AA W VRP L+EQPVVF+GSEG+ VVA + D+LW+LA GLGP+E E Sbjct: 71 TGGLAALWRVRPGRPLVEQPVVFLGSEGERGVVAANLSDFLWVLADGLGPMEVVEHEEYE 130 Query: 127 RIAQPQLAEFASKNA-APSRTASDVMEDANNEFPTFHQ 163 P LAE A ++A P RT D++ A ++FPTF + Sbjct: 131 ARPNPALAELAERHATTPRRTTRDIVTAARSQFPTFSE 168 >ref|YP_004147878.1| hypothetical protein Psesu_2822 [Pseudoxanthomonas suwonensis 11-1] gb|ADV28647.1| hypothetical protein Psesu_2822 [Pseudoxanthomonas suwonensis 11-1] Length = 172 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 85/168 (50%), Positives = 114/168 (67%), Gaps = 1/168 (0%) Query: 4 ETRFPDLLAQVNRLEYDYADGDGIEFEPYDEFLPTGETERWFRAWTGNSTADASCFRVFG 63 +T FP LL ++++LE+DY DGDG +FEPY F P E WF+AWTGN+ D S FRVFG Sbjct: 5 DTTFPPLLRKLHQLEFDYDDGDGYDFEPYQSFFPAEENASWFKAWTGNAAIDGSQFRVFG 64 Query: 64 QDATGGYAAFWTVRPDADLLEQPVVFMGSEGQTAVVARHFRDYLWLLAAGLGPLEATCFP 123 QD TGGYAAFW V PD + +QPVVF+GSEG+ VVA + +YLWLLA G+GP EA +P Sbjct: 65 QDGTGGYAAFWLVLPDQPIEKQPVVFLGSEGEKGVVALNLDEYLWLLADGVGPYEAVAYP 124 Query: 124 EEPRIAQPQLAEFASKNAAPSR-TASDVMEDANNEFPTFHQFIESQCR 170 Q FA +N+ ++ +A++V+ AN +P+F + I+S CR Sbjct: 125 SPDSKPNAQFTLFAQENSGIAKLSAAEVLARANEAYPSFSEQIDSLCR 172