BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2913.p (221 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774922.1| sugar phosphate isomerase/epimerase [Herbasp... 409 e-112 ref|YP_004849238.1| PfkB-family carbohydrate kinase [Pseudogulbe... 192 2e-47 ref|ZP_03699935.1| PfkB domain protein [Lutiella nitroferrum 200... 187 1e-45 gb|AAT50882.1| PA2260 [synthetic construct] 175 4e-42 ref|NP_250950.1| hypothetical protein PA2260 [Pseudomonas aerugi... 175 4e-42 >ref|YP_003774922.1| sugar phosphate isomerase/epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ63014.1| sugar phosphate isomerase/epimerase protein [Herbaspirillum seropedicae SmR1] Length = 247 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 205/221 (92%), Positives = 211/221 (95%) Query: 1 MVAAAGAAGLEIRRELFDGPQDLPALRALLEQHKLFSVYSAPLELFRADGRFDREQIGQA 60 MVAAAGAAGLEIRRELFDGPQDLPALR LL QHKLFSVYSAP ELF A+GRFDREQI A Sbjct: 27 MVAAAGAAGLEIRRELFDGPQDLPALRELLAQHKLFSVYSAPFELFGAEGRFDREQIALA 86 Query: 61 MNEAEELGARFLKVSLGHFSVASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLA 120 M+EAEELGARFLKVSLGHFS ASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLA Sbjct: 87 MSEAEELGARFLKVSLGHFSAASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLA 146 Query: 121 LCTGNGYAFGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQEDKGKLKAVPLQAQD 180 LCTGNGYAFGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQ+ KGKL+AVPLQAQD Sbjct: 147 LCTGNGYAFGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQDHKGKLRAVPLQAQD 206 Query: 181 THWPAMLAHFPTGILRAIEFPLVGTDLEETTRRHVAMLAAV 221 +HW MLAHFPTGILRAIEFPLVG+DLEETTRRHVAMLAAV Sbjct: 207 SHWQEMLAHFPTGILRAIEFPLVGSDLEETTRRHVAMLAAV 247 >ref|YP_004849238.1| PfkB-family carbohydrate kinase [Pseudogulbenkiania sp. NH8B] dbj|BAK78824.1| PfkB-family carbohydrate kinase [Pseudogulbenkiania sp. NH8B] Length = 567 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 110/211 (52%), Positives = 134/211 (63%), Gaps = 1/211 (0%) Query: 10 LEIRRELF-DGPQDLPALRALLEQHKLFSVYSAPLELFRADGRFDREQIGQAMNEAEELG 68 +EIRRELF P +L L L L VYSAPLELF DG+ D ++ A+ EA ELG Sbjct: 36 IEIRRELFPTTPPELGPLADALAHSHLDVVYSAPLELFGTDGQLDLARLDLALAEAVELG 95 Query: 69 ARFLKVSLGHFSVASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLALCTGNGYA 128 A LK+ LG++ SDL L + L+ SP+ +L+ENDQTP GG L P+V+F C G Sbjct: 96 ASTLKLPLGYYGAGSDLAPLAQRLAGSPVRLLVENDQTPYGGTLAPLVAFFTACRAEGVP 155 Query: 129 FGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQEDKGKLKAVPLQAQDTHWPAMLA 188 GMTFD+GNWHW G DP AA +LAP+V Y+H KGV+ GKL AVPL D W + A Sbjct: 156 VGMTFDIGNWHWTGTDPLVAAVALAPYVDYLHGKGVEARGGKLHAVPLSESDAGWRRLFA 215 Query: 189 HFPTGILRAIEFPLVGTDLEETTRRHVAMLA 219 HF I RAIEFPL G DL T R+VA+LA Sbjct: 216 HFRADIPRAIEFPLSGGDLAALTARYVALLA 246 >ref|ZP_03699935.1| PfkB domain protein [Lutiella nitroferrum 2002] gb|EEG07238.1| PfkB domain protein [Lutiella nitroferrum 2002] Length = 567 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 112/211 (53%), Positives = 133/211 (63%), Gaps = 1/211 (0%) Query: 10 LEIRRELF-DGPQDLPALRALLEQHKLFSVYSAPLELFRADGRFDREQIGQAMNEAEELG 68 +EIRRELF P L L L L VYSAPLELF DG+ D ++ A+ EA ELG Sbjct: 36 IEIRRELFPTSPPLLGPLADALAASHLDVVYSAPLELFGTDGQLDLARLELALAEAVELG 95 Query: 69 ARFLKVSLGHFSVASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLALCTGNGYA 128 A LK+ LGH+ SDL L + L+ SPI +L+ENDQTP GG L P+V+F C G Sbjct: 96 AGTLKLPLGHYGAVSDLAPLAQRLAGSPIRLLVENDQTPHGGTLAPLVAFFTACRAEGVP 155 Query: 129 FGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQEDKGKLKAVPLQAQDTHWPAMLA 188 GMTFD+GNWHW DP AA +LAP+V Y+H KGV+ GKL AVPL D W + A Sbjct: 156 VGMTFDIGNWHWTDTDPLAAAVALAPYVDYLHGKGVEARGGKLHAVPLSESDAGWRRLFA 215 Query: 189 HFPTGILRAIEFPLVGTDLEETTRRHVAMLA 219 HF T I RAIEFPL G DL T R+VA+LA Sbjct: 216 HFRTDIPRAIEFPLSGGDLAALTARYVALLA 246 >gb|AAT50882.1| PA2260 [synthetic construct] Length = 261 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 103/221 (46%), Positives = 136/221 (61%), Gaps = 3/221 (1%) Query: 1 MVAAAGAAGLEIRRELFDGPQDLPALRALLEQHKLFSVYSAPLELFRADGRFDREQIGQA 60 ++A AGA +E+R ELF GP D AL A ++ L V+S+PLEL+R DG+ + E + Sbjct: 29 LLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLELWREDGQLNPE-LEPT 87 Query: 61 MNEAEELGARFLKVSLGHFSVASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLA 120 + AE GA +LKVSLG DL +L R L+ +++L+ENDQTPQGGR+E + F Sbjct: 88 LRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFR 147 Query: 121 LCTGNGYAFGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQEDK-GKLKAVPLQAQ 179 L MTFD+GNW WQ + AA L +V YVHCK V ++ GKL AVP A Sbjct: 148 LAERQQLDLAMTFDIGNWRWQEQAADEAALRLGRYVGYVHCKAVIRNRDGKLVAVPPSAA 207 Query: 180 D-THWPAMLAHFPTGILRAIEFPLVGTDLEETTRRHVAMLA 219 D +W +L HFP G+ RAIE+PL G DL +RRH+A LA Sbjct: 208 DLQYWQRLLQHFPEGVARAIEYPLQGDDLLSLSRRHIAALA 248 >ref|NP_250950.1| hypothetical protein PA2260 [Pseudomonas aeruginosa PAO1] ref|ZP_01365624.1| hypothetical protein PaerPA_01002750 [Pseudomonas aeruginosa PACS2] ref|YP_002440633.1| putative putative epimerase [Pseudomonas aeruginosa LESB58] ref|ZP_04934022.1| hypothetical protein PA2G_01363 [Pseudomonas aeruginosa 2192] gb|AAG05648.1|AE004652_1 hypothetical protein PA2260 [Pseudomonas aeruginosa PAO1] gb|AAK37647.1| KguE [Pseudomonas aeruginosa PAO1] gb|EAZ58141.1| hypothetical protein PA2G_01363 [Pseudomonas aeruginosa 2192] emb|CAW27771.1| putative putative epimerase [Pseudomonas aeruginosa LESB58] dbj|GAA17840.1| putative putative epimerase [Pseudomonas aeruginosa NCMG1179] gb|AEO75263.1| putative epimerase [Pseudomonas aeruginosa M18] Length = 260 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 103/221 (46%), Positives = 136/221 (61%), Gaps = 3/221 (1%) Query: 1 MVAAAGAAGLEIRRELFDGPQDLPALRALLEQHKLFSVYSAPLELFRADGRFDREQIGQA 60 ++A AGA +E+R ELF GP D AL A ++ L V+S+PLEL+R DG+ + E + Sbjct: 29 LLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLELWREDGQLNPE-LEPT 87 Query: 61 MNEAEELGARFLKVSLGHFSVASDLQSLLRFLSHSPIEVLLENDQTPQGGRLEPIVSFLA 120 + AE GA +LKVSLG DL +L R L+ +++L+ENDQTPQGGR+E + F Sbjct: 88 LRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLVENDQTPQGGRIEVLERFFR 147 Query: 121 LCTGNGYAFGMTFDMGNWHWQGVDPETAARSLAPHVRYVHCKGVQEDK-GKLKAVPLQAQ 179 L MTFD+GNW WQ + AA L +V YVHCK V ++ GKL AVP A Sbjct: 148 LAERQQLDLAMTFDIGNWRWQEQAADEAALRLGRYVGYVHCKAVIRNRDGKLVAVPPSAA 207 Query: 180 D-THWPAMLAHFPTGILRAIEFPLVGTDLEETTRRHVAMLA 219 D +W +L HFP G+ RAIE+PL G DL +RRH+A LA Sbjct: 208 DLQYWQRLLQHFPEGVARAIEYPLQGDDLLSLSRRHIAALA 248