BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2911.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774921.1| amino acid ABC transporter ATPase [Herbaspir... 461 e-128 ref|YP_550765.1| ABC transporter-like protein [Polaromonas sp. J... 347 1e-93 ref|YP_841322.1| ABC transporter ATPase [Ralstonia eutropha H16]... 335 6e-90 ref|YP_004681939.1| PAAT family ABC transporter permease [Cupria... 329 3e-88 ref|YP_002824432.1| ABC transporter ATP-binding protein [Sinorhi... 327 1e-87 >ref|YP_003774921.1| amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63013.1| ABC-type amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 244 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 232/244 (95%), Positives = 238/244 (97%) Query: 36 MPIVEIDNITKRFGSNQVLNGISLSVERGQVIAVIGRSGSGKSTMLRCINGLETIDGGSI 95 MPIVEI+NITKRFGSNQVLNGISLSVERGQV+A+IGRSGSGKSTMLRCINGLETIDGGSI Sbjct: 1 MPIVEINNITKRFGSNQVLNGISLSVERGQVVAIIGRSGSGKSTMLRCINGLETIDGGSI 60 Query: 96 NVAGHKLTAKHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKKVATEKARETAI 155 VAGHKLT KHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKK ATE ARETAI Sbjct: 61 TVAGHKLTHKHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKKTATETARETAI 120 Query: 156 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELTQEVLKV 215 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELT EVLKV Sbjct: 121 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELTAEVLKV 180 Query: 216 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPSKEFFSDPQTPEARQFVGA 275 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPS+EFF+DPQTPEARQF+GA Sbjct: 181 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPSEEFFADPQTPEARQFIGA 240 Query: 276 GNIK 279 G IK Sbjct: 241 GAIK 244 >ref|YP_550765.1| ABC transporter-like protein [Polaromonas sp. JS666] gb|ABE45867.1| amino acid ABC transporter ATP-binding protein, PAAT family [Polaromonas sp. JS666] Length = 243 Score = 347 bits (889), Expect = 1e-93, Method: Composition-based stats. Identities = 173/244 (70%), Positives = 204/244 (83%), Gaps = 1/244 (0%) Query: 36 MPIVEIDNITKRFGSNQVLNGISLSVERGQVIAVIGRSGSGKSTMLRCINGLETIDGGSI 95 MPIV+I+N+ KRFG+ +VL G+SL VE GQV+A+IGRSGSGKST+LRC+NGLETI G+I Sbjct: 1 MPIVKIENVVKRFGAVEVLKGVSLDVEAGQVVAIIGRSGSGKSTLLRCLNGLETIYAGNI 60 Query: 96 NVAGHKLTAKHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKKVATEKARETAI 155 ++AGH+L HL ELRKDVG+VFQ YNLFPHLTV ENIML+PRI K ++ E+ R A Sbjct: 61 DIAGHRLDNSGRHLRELRKDVGIVFQSYNLFPHLTVGENIMLAPRITKGISREETRRIAE 120 Query: 156 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELTQEVLKV 215 L QVGL K AYPE+LSGGQQQRVAIARSLAM+P+VMLFDEVTSALDPELT EVL V Sbjct: 121 ATLAQVGLSEKFGAYPEKLSGGQQQRVAIARSLAMQPKVMLFDEVTSALDPELTGEVLIV 180 Query: 216 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPSKEFFSDPQTPEARQFVGA 275 ME LA+ GMTMLLVTHEM FA+ VAD+TVFMHQGKVWEA PS++ F+ PQTPE RQF+G Sbjct: 181 MENLAKNGMTMLLVTHEMGFAKGVADITVFMHQGKVWEAGPSEQLFASPQTPELRQFIG- 239 Query: 276 GNIK 279 G++K Sbjct: 240 GSLK 243 >ref|YP_841322.1| ABC transporter ATPase [Ralstonia eutropha H16] emb|CAJ96592.1| ABC-type transporter, ATPase component: PAAT family [Ralstonia eutropha H16] Length = 244 Score = 335 bits (858), Expect = 6e-90, Method: Composition-based stats. Identities = 168/244 (68%), Positives = 197/244 (80%) Query: 36 MPIVEIDNITKRFGSNQVLNGISLSVERGQVIAVIGRSGSGKSTMLRCINGLETIDGGSI 95 M IVE + K +G+ +VL G+S ++E GQV+A+IGRSGSGKSTMLRC+NGLETI+ G I Sbjct: 1 MSIVEAQGVHKSYGAVEVLKGVSFAIEPGQVVAIIGRSGSGKSTMLRCLNGLETINAGDI 60 Query: 96 NVAGHKLTAKHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKKVATEKARETAI 155 VAGHKL + L++LR+DVGMVFQ YNLFPHLTV ENI L+P IVKK+A K Sbjct: 61 TVAGHKLDHDRKRLLDLRRDVGMVFQSYNLFPHLTVGENIALAPSIVKKMAASKIDGIVD 120 Query: 156 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELTQEVLKV 215 +VL QVGL K+D YPEQLSGGQQQRVAIARSLAMEP+VMLFDEVTSALDPELT EVL+V Sbjct: 121 QVLTQVGLLDKKDCYPEQLSGGQQQRVAIARSLAMEPKVMLFDEVTSALDPELTAEVLRV 180 Query: 216 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPSKEFFSDPQTPEARQFVGA 275 ME LA GMTM+LVTHEMEFARR+A T+FMHQGKV EA PSK F+ P+TPE +QF+GA Sbjct: 181 MENLAASGMTMVLVTHEMEFARRMAHTTIFMHQGKVHEAGPSKALFAQPRTPELQQFLGA 240 Query: 276 GNIK 279 G +K Sbjct: 241 GALK 244 >ref|YP_004681939.1| PAAT family ABC transporter permease [Cupriavidus necator N-1] gb|AEI80707.1| glutamine ABC transport system ATP-binding protein GlnQ [Cupriavidus necator N-1] Length = 244 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 165/244 (67%), Positives = 196/244 (80%) Query: 36 MPIVEIDNITKRFGSNQVLNGISLSVERGQVIAVIGRSGSGKSTMLRCINGLETIDGGSI 95 M IVE + K +G+ +VL G+S ++E GQV+A+IGRSGSGKSTMLRC+NGLETI+ G+I Sbjct: 1 MSIVEAQGVHKSYGAVEVLKGVSFAIEPGQVVAIIGRSGSGKSTMLRCLNGLETINAGNI 60 Query: 96 NVAGHKLTAKHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKKVATEKARETAI 155 VAGHKL + L++LR+DVGMVFQ YNLFPHLT ENI L+P IVKK+A K Sbjct: 61 TVAGHKLDHDRKRLLDLRRDVGMVFQSYNLFPHLTAGENIALAPSIVKKMAASKIDGIVD 120 Query: 156 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELTQEVLKV 215 +VL QVGL K+D YPEQLSGGQQQRVAIARSLAMEP+VMLFDEVTSALDPELT EVL+V Sbjct: 121 QVLTQVGLLDKKDCYPEQLSGGQQQRVAIARSLAMEPKVMLFDEVTSALDPELTAEVLRV 180 Query: 216 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPSKEFFSDPQTPEARQFVGA 275 ME LA GMTM+LVTHEMEFARR+A T+FMHQGKV EA PS+ F+ P+TPE +QF+ A Sbjct: 181 METLAASGMTMVLVTHEMEFARRMAHTTIFMHQGKVHEAGPSQALFAQPRTPELQQFLSA 240 Query: 276 GNIK 279 G +K Sbjct: 241 GALK 244 >ref|YP_002824432.1| ABC transporter ATP-binding protein [Sinorhizobium fredii NGR234] gb|ACP23679.1| putative ABC transporter, ATP-binding protein [Sinorhizobium fredii NGR234] Length = 243 Score = 327 bits (838), Expect = 1e-87, Method: Composition-based stats. Identities = 165/238 (69%), Positives = 194/238 (81%) Query: 36 MPIVEIDNITKRFGSNQVLNGISLSVERGQVIAVIGRSGSGKSTMLRCINGLETIDGGSI 95 MP V ++N+ K FG+ +VL G+SLSV RG+V A+IGRSGSGKST+LRC+NGLE I+ G I Sbjct: 1 MPEVVVENVHKSFGALEVLKGVSLSVGRGEVFALIGRSGSGKSTLLRCMNGLEKINSGKI 60 Query: 96 NVAGHKLTAKHEHLIELRKDVGMVFQHYNLFPHLTVEENIMLSPRIVKKVATEKARETAI 155 +AGH L + L +LR DVG+VFQ YNLFPHLTV ENIML+PRIVK VA KARE A Sbjct: 61 EIAGHALGEDAKALRKLRTDVGIVFQSYNLFPHLTVGENIMLAPRIVKDVAKTKAREVAR 120 Query: 156 KVLKQVGLDHKRDAYPEQLSGGQQQRVAIARSLAMEPQVMLFDEVTSALDPELTQEVLKV 215 +VL+ VGL K D+YP+QLSGGQQQRVAIARSLAM P+VMLFDEVTSALDPELT+EVL V Sbjct: 121 EVLQLVGLSEKFDSYPDQLSGGQQQRVAIARSLAMRPKVMLFDEVTSALDPELTEEVLTV 180 Query: 216 MEELARGGMTMLLVTHEMEFARRVADLTVFMHQGKVWEARPSKEFFSDPQTPEARQFV 273 ME LAR GMTM+LVTHEM FARRVA T+FMH+GK+WE PS F++P+TPE RQFV Sbjct: 181 MENLARDGMTMILVTHEMGFARRVATQTIFMHKGKIWEQGPSAALFANPETPELRQFV 238