BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2901.p (216 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02891548.1| conserved hypothetical protein [Burkholderia ... 195 5e-48 ref|YP_775416.1| hypothetical protein Bamb_3528 [Burkholderia am... 187 1e-45 ref|YP_372677.1| hypothetical protein Bcep18194_B1919 [Burkholde... 186 1e-45 ref|YP_001810692.1| hypothetical protein BamMC406_4011 [Burkhold... 185 4e-45 gb|EGD05555.1| hypothetical protein B1M_05831 [Burkholderia sp. ... 183 1e-44 >ref|ZP_02891548.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] gb|EDT02862.1| conserved hypothetical protein [Burkholderia ambifaria IOP40-10] Length = 281 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 106/189 (56%), Positives = 131/189 (69%), Gaps = 3/189 (1%) Query: 22 YAEEAQPCDQRVIATVAHWAGIKGKLISRDEPGGLLAATACKAMPHAPTTTIVAIAFDTD 81 +A + QPCD I VA WAGI I+ + L+ A+ACKAMP+AP TTI A+AFD+ Sbjct: 28 HATDNQPCDDAAITAVARWAGIASARIATRDADRLVIASACKAMPNAPQTTIAAVAFDS- 86 Query: 82 HPDPGKRDGNKVQQVVAMVEDGKVVAAARSVVEEDAATLFG--SYRIDTAPYILSPTIRA 139 P GN QV+A+VE GK+VAAARS+VEEDA T G SYRIDTAPY LSP +RA Sbjct: 87 LPKSENPGGNNKLQVIALVEGGKIVAAARSIVEEDATTEVGPDSYRIDTAPYRLSPDVRA 146 Query: 140 FGVLFQSSAIAPSFVDASAENELTLWIRDGDHLRAVFGTNVSGWVAADEVSEGPGPGYTH 199 FGV+F SSA PS DASA ELTLW+R+GD +R VFGTN+ GWV+ + + GPG G Sbjct: 147 FGVVFLSSARGPSCPDASASEELTLWVREGDRIRPVFGTNLYGWVSVEGDACGPGTGDAR 206 Query: 200 SESADMTVS 208 SE A+MT++ Sbjct: 207 SEDANMTIA 215 >ref|YP_775416.1| hypothetical protein Bamb_3528 [Burkholderia ambifaria AMMD] gb|ABI89082.1| conserved hypothetical protein [Burkholderia ambifaria AMMD] Length = 281 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 104/188 (55%), Positives = 127/188 (67%), Gaps = 3/188 (1%) Query: 23 AEEAQPCDQRVIATVAHWAGIKGKLISRDEPGGLLAATACKAMPHAPTTTIVAIAFDTDH 82 A + QPCD I VA WAGI I+ + L A+ACKAMP+AP TTI A+AFD+ Sbjct: 29 ATDNQPCDDAAITAVARWAGIASARIATRDADRLAIASACKAMPNAPQTTIAAVAFDS-L 87 Query: 83 PDPGKRDGNKVQQVVAMVEDGKVVAAARSVVEEDAATLFG--SYRIDTAPYILSPTIRAF 140 P GN QVVA+VE GK+VAAARS+VEEDA T G SYRIDTAPY LSP +RAF Sbjct: 88 PKSENPGGNNKLQVVALVEGGKIVAAARSIVEEDATTEVGPDSYRIDTAPYRLSPDVRAF 147 Query: 141 GVLFQSSAIAPSFVDASAENELTLWIRDGDHLRAVFGTNVSGWVAADEVSEGPGPGYTHS 200 GV+F SSA PS DA+A ELTLW+R+GD +R VFGTN+ GWV+ + + G G G + Sbjct: 148 GVVFLSSARGPSCPDANASEELTLWVREGDRIRPVFGTNLYGWVSVEGEACGAGAGDARA 207 Query: 201 ESADMTVS 208 E A MT++ Sbjct: 208 EDARMTIA 215 >ref|YP_372677.1| hypothetical protein Bcep18194_B1919 [Burkholderia sp. 383] gb|ABB12033.1| hypothetical protein Bcep18194_B1919 [Burkholderia sp. 383] Length = 274 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 106/205 (51%), Positives = 137/205 (66%), Gaps = 3/205 (1%) Query: 6 ILRYFSLLALISVLPAYAEEAQPCDQRVIATVAHWAGIKGKLISRDEPGGLLAATACKAM 65 ILR+ LLAL++ A ++Q C + VA WAGI ++ + L+ A+ACK M Sbjct: 5 ILRFAPLLALVAAPAVQAADSQVCGDDTVTAVARWAGIASARLATRDADRLVVASACKVM 64 Query: 66 PHAPTTTIVAIAFDTDHPDPGKRDGNKVQQVVAMVEDGKVVAAARSVVEEDAATLFG--S 123 P+AP TTI A+AFD+ P D ++ QVVA+VE GKVVAA +SVV+EDA T G S Sbjct: 65 PNAPETTIAAVAFDS-LPKSKNPDDSEKLQVVALVEGGKVVAAEKSVVQEDATTEIGENS 123 Query: 124 YRIDTAPYILSPTIRAFGVLFQSSAIAPSFVDASAENELTLWIRDGDHLRAVFGTNVSGW 183 YRIDTA Y LSP +RAFGV+F SSA S DA A+ ELTLW+R+G+H+R+VFGTN+ GW Sbjct: 124 YRIDTARYQLSPDLRAFGVVFTSSARGASCPDADADGELTLWVREGNHIRSVFGTNLRGW 183 Query: 184 VAADEVSEGPGPGYTHSESADMTVS 208 V+ + S GPG G SE A MTV+ Sbjct: 184 VSVEGESCGPGVGDASSEEARMTVA 208 >ref|YP_001810692.1| hypothetical protein BamMC406_4011 [Burkholderia ambifaria MC40-6] gb|ACB66476.1| conserved hypothetical protein [Burkholderia ambifaria MC40-6] Length = 272 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 103/188 (54%), Positives = 127/188 (67%), Gaps = 3/188 (1%) Query: 23 AEEAQPCDQRVIATVAHWAGIKGKLISRDEPGGLLAATACKAMPHAPTTTIVAIAFDTDH 82 A E QPCD I VA WAGI I+ + L+ A+ACKAMP+AP TTI A+AFD+ Sbjct: 20 ATENQPCDDAAITAVARWAGIASARIATRDADRLVIASACKAMPNAPQTTIAAVAFDS-L 78 Query: 83 PDPGKRDGNKVQQVVAMVEDGKVVAAARSVVEEDAATLFG--SYRIDTAPYILSPTIRAF 140 P GN QVVA+VE GK+VAAARS+V EDA T G SYRIDTAPY LSP +RAF Sbjct: 79 PKSENPGGNNKLQVVALVEGGKIVAAARSIVAEDATTEVGPDSYRIDTAPYRLSPDVRAF 138 Query: 141 GVLFQSSAIAPSFVDASAENELTLWIRDGDHLRAVFGTNVSGWVAADEVSEGPGPGYTHS 200 GV+F SSA PS DA+A ELT+W+R+GD +R VFGTN+ GWV+ + + G G G + Sbjct: 139 GVVFLSSARGPSCPDANASEELTMWVREGDRIRPVFGTNLYGWVSVEGDACGAGAGDARA 198 Query: 201 ESADMTVS 208 E A MT++ Sbjct: 199 EDARMTIA 206 >gb|EGD05555.1| hypothetical protein B1M_05831 [Burkholderia sp. TJI49] Length = 273 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 108/208 (51%), Positives = 137/208 (65%), Gaps = 3/208 (1%) Query: 3 MQTILRYFSLLALISVLPAYAEEAQPCDQRVIATVAHWAGIKGKLISRDEPGGLLAATAC 62 M ++R L A+ +V +A QPC +A VA WAG+ I+ G + A+AC Sbjct: 1 MNRLVRCLPLFAVAAVSVVHASSDQPCSDDTVAAVARWAGVANASIAAGGTNGRVVASAC 60 Query: 63 KAMPHAPTTTIVAIAFDTDHPDPGKRDGNKVQQVVAMVEDGKVVAAARSVVEEDAATLFG 122 K MP+AP TTI A AFD DG+K+Q VVA+VE GKVVAA R+VV+EDAAT G Sbjct: 61 KVMPNAPGTTIAAAAFDALPKRGNPDDGDKLQ-VVALVEGGKVVAAERTVVQEDAATQIG 119 Query: 123 --SYRIDTAPYILSPTIRAFGVLFQSSAIAPSFVDASAENELTLWIRDGDHLRAVFGTNV 180 SYRIDTAPY LSP +RAFGV+F SSA S DA+AE ELTLW+R+G+ +R VFGTN+ Sbjct: 120 ENSYRIDTAPYRLSPDVRAFGVVFTSSAPGASCPDAAAEEELTLWVREGNRIRPVFGTNL 179 Query: 181 SGWVAADEVSEGPGPGYTHSESADMTVS 208 GWVA + + GPG G SE+A MT++ Sbjct: 180 HGWVAVEGEACGPGVGDASSENAYMTIA 207