BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2899.p (171 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04947383.1| hypothetical protein BDAG_03354 [Burkholderia... 233 6e-60 ref|YP_002908723.1| type VI secretion lipoprotein [Burkholderia ... 228 2e-58 ref|ZP_04942202.1| hypothetical protein BCPG_03735 [Burkholderia... 226 1e-57 ref|YP_003607775.1| type VI secretion lipoprotein, VC_A0113 fami... 225 2e-57 ref|YP_003906255.1| type VI secretion lipoprotein, VC_A0113 fami... 224 4e-57 >ref|ZP_04947383.1| hypothetical protein BDAG_03354 [Burkholderia dolosa AUO158] gb|EAY70554.1| hypothetical protein BDAG_03354 [Burkholderia dolosa AUO158] Length = 183 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 115/169 (68%), Positives = 140/169 (82%) Query: 1 MSIRFIFLSIAAALLLAGCGAWQTVSDASSGMYHAVFFKQIKVLNVDLVPREALNPDDAG 60 MS RF ++A+ LLL+ CGAWQ+VSDASS YHAVFFKQ+KVLNVDL REALNPDDAG Sbjct: 8 MSFRFAISTVASVLLLSACGAWQSVSDASSSAYHAVFFKQVKVLNVDLSAREALNPDDAG 67 Query: 61 RSTSVVVRIYQLKDRKIFDGASYEDLLVLDRTVLGQDLLANMASVVNPGGSSSLSQTIEA 120 R TSV VR+YQLKDRK+FDGASY+DLL DRTVL QDLLA++ SV+NPG S+SL+Q ++A Sbjct: 68 RPTSVAVRVYQLKDRKMFDGASYDDLLKNDRTVLAQDLLASIGSVLNPGASASLTQPMQA 127 Query: 121 ETKYIAVVAFYRNADAASDWKYLIEKKKLNPDKPMRLELFDHSLVSLGG 169 TKY+A+VAFYRN + WKY+IEKKKL+ DKP++LEL D L++ GG Sbjct: 128 GTKYVAIVAFYRNPGSGDGWKYVIEKKKLDADKPLKLELVDQLLIASGG 176 >ref|YP_002908723.1| type VI secretion lipoprotein [Burkholderia glumae BGR1] gb|ACR31488.1| type VI secretion lipoprotein, VC_A0113 family [Burkholderia glumae BGR1] Length = 185 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 115/169 (68%), Positives = 132/169 (78%) Query: 1 MSIRFIFLSIAAALLLAGCGAWQTVSDASSGMYHAVFFKQIKVLNVDLVPREALNPDDAG 60 M IR +A+ LLL+ CGAWQ VSDASS YHAVFFKQ KVLNVDL REALNPDDAG Sbjct: 8 MPIRVTLSILASTLLLSACGAWQAVSDASSSTYHAVFFKQTKVLNVDLSAREALNPDDAG 67 Query: 61 RSTSVVVRIYQLKDRKIFDGASYEDLLVLDRTVLGQDLLANMASVVNPGGSSSLSQTIEA 120 R TSV VRIYQLKDRKIFD ASYEDLL DRTVL QDLL +MASV+NPG S+S +Q ++A Sbjct: 68 RPTSVAVRIYQLKDRKIFDQASYEDLLRNDRTVLSQDLLTSMASVINPGASASFTQRMQA 127 Query: 121 ETKYIAVVAFYRNADAASDWKYLIEKKKLNPDKPMRLELFDHSLVSLGG 169 +TKY+A+VAFYRN WKY+IEKKKL+ DKP++LEL D L+ G Sbjct: 128 DTKYVAIVAFYRNPGNGDGWKYVIEKKKLDADKPLKLELVDQLLIDARG 176 >ref|ZP_04942202.1| hypothetical protein BCPG_03735 [Burkholderia cenocepacia PC184] gb|EAY65373.1| hypothetical protein BCPG_03735 [Burkholderia cenocepacia PC184] Length = 183 Score = 226 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 111/171 (64%), Positives = 139/171 (81%) Query: 1 MSIRFIFLSIAAALLLAGCGAWQTVSDASSGMYHAVFFKQIKVLNVDLVPREALNPDDAG 60 M+ RF+ ++A+ LL+GCGAWQTVSDASS Y AVFFKQ+KVLN+DL REALNPDDAG Sbjct: 8 MTRRFVTSTLASVTLLSGCGAWQTVSDASSDAYRAVFFKQVKVLNIDLSAREALNPDDAG 67 Query: 61 RSTSVVVRIYQLKDRKIFDGASYEDLLVLDRTVLGQDLLANMASVVNPGGSSSLSQTIEA 120 R TSV VR+YQLKDRK+FDGASY+DLL DRTVL QDL A+MA+ +NPG ++SLSQ ++ Sbjct: 68 RPTSVAVRVYQLKDRKMFDGASYDDLLKHDRTVLAQDLRADMATALNPGAAASLSQPMQP 127 Query: 121 ETKYIAVVAFYRNADAASDWKYLIEKKKLNPDKPMRLELFDHSLVSLGGGS 171 +TKY+A+VAFYRN + WK +IEKKKL+ DKP++LEL D L++ GG S Sbjct: 128 DTKYVAIVAFYRNPGSGDGWKVVIEKKKLDADKPLKLELVDQLLLAAGGAS 178 >ref|YP_003607775.1| type VI secretion lipoprotein, VC_A0113 family [Burkholderia sp. CCGE1002] gb|ADG18264.1| type VI secretion lipoprotein, VC_A0113 family [Burkholderia sp. CCGE1002] Length = 173 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 114/171 (66%), Positives = 140/171 (81%) Query: 1 MSIRFIFLSIAAALLLAGCGAWQTVSDASSGMYHAVFFKQIKVLNVDLVPREALNPDDAG 60 M++RF +IA+ LL+ CGAWQ VSDASS YHAVFFKQIKVL+VDL REALNPDDAG Sbjct: 1 MNLRFTVSTIASVALLSACGAWQAVSDASSSAYHAVFFKQIKVLDVDLSAREALNPDDAG 60 Query: 61 RSTSVVVRIYQLKDRKIFDGASYEDLLVLDRTVLGQDLLANMASVVNPGGSSSLSQTIEA 120 R+TSV VR+YQLK RK+FDGASYEDLL DRTVL +DL A+MASV+NPG S+SLSQ ++A Sbjct: 61 RATSVAVRVYQLKARKMFDGASYEDLLKNDRTVLARDLQASMASVLNPGASASLSQPMQA 120 Query: 121 ETKYIAVVAFYRNADAASDWKYLIEKKKLNPDKPMRLELFDHSLVSLGGGS 171 +T+Y+AVVAFYRN + WKY+IEKKKL+ DKP+++ L D LV+ G G+ Sbjct: 121 DTEYVAVVAFYRNPGSGDGWKYVIEKKKLDADKPLKISLMDQFLVTAGTGA 171 >ref|YP_003906255.1| type VI secretion lipoprotein, VC_A0113 family [Burkholderia sp. CCGE1003] gb|ADN56964.1| type VI secretion lipoprotein, VC_A0113 family [Burkholderia sp. CCGE1003] Length = 176 Score = 224 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 109/171 (63%), Positives = 141/171 (82%) Query: 1 MSIRFIFLSIAAALLLAGCGAWQTVSDASSGMYHAVFFKQIKVLNVDLVPREALNPDDAG 60 MSIR +++++ALLL+ CGAWQ VSD++S YHAVF++Q+KVLNVDL REALNPDDAG Sbjct: 1 MSIRLTVITVSSALLLSACGAWQAVSDSTSNAYHAVFYRQVKVLNVDLSAREALNPDDAG 60 Query: 61 RSTSVVVRIYQLKDRKIFDGASYEDLLVLDRTVLGQDLLANMASVVNPGGSSSLSQTIEA 120 R+TSV VR+YQL+DRK+FDGASY+DLL DRTVL QDL A+MA+V+NPG S+SL+Q ++ Sbjct: 61 RATSVAVRVYQLRDRKLFDGASYDDLLKNDRTVLAQDLQASMAAVLNPGASASLAQPMQP 120 Query: 121 ETKYIAVVAFYRNADAASDWKYLIEKKKLNPDKPMRLELFDHSLVSLGGGS 171 +TKY+A+VAFYRN + WKY+I KKKL+ DKP++LEL D LV+ G S Sbjct: 121 DTKYVAIVAFYRNPGSGDGWKYVIAKKKLDADKPLKLELVDQLLVAPDGTS 171