BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2894.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04942206.1| hypothetical protein BCPG_03739 [Burkholderia... 340 2e-91 ref|ZP_02381169.1| hypothetical protein BuboB_25845 [Burkholderi... 333 1e-89 ref|YP_001810338.1| hypothetical protein BamMC406_3655 [Burkhold... 332 2e-89 ref|ZP_02888990.1| protein of unknown function DUF1215 [Burkhold... 332 3e-89 ref|ZP_02905204.1| ImcF domain protein [Burkholderia ambifaria M... 330 8e-89 >ref|ZP_04942206.1| hypothetical protein BCPG_03739 [Burkholderia cenocepacia PC184] gb|EAY65377.1| hypothetical protein BCPG_03739 [Burkholderia cenocepacia PC184] Length = 1262 Score = 340 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 165/212 (77%), Positives = 186/212 (87%) Query: 1 MARFMRPDNGVIAQFVTTQLAGVIERRGDQWVAAQGADHEALTVDPAFLNSLNKMTQVST 60 MARFMRPDNGVI QFVTTQLAGV+ER+GD+WVAAQGADH ALTVDP FL SLNK+T++ST Sbjct: 954 MARFMRPDNGVITQFVTTQLAGVVERQGDRWVAAQGADHGALTVDPGFLASLNKLTRIST 1013 Query: 61 ILFSSGDARVRYELQAIPTPGVTDMKFVLAGRTFHYFNQKQDWVPFEWPGQSIESLSHIE 120 +LF SGDARVRYELQA+PTPGVTDM+FVL+GR HYFNQKQ+W PFEWPGQS+E+LS IE Sbjct: 1014 VLFPSGDARVRYELQAVPTPGVTDMRFVLSGRELHYFNQKQEWTPFEWPGQSLENLSRIE 1073 Query: 121 WQTQQGGLRSALGSQGRFGLIRLLERATVSQQDSARYLLTWKPDTSQEIALKVQLRSEVG 180 WQT++GGLR+AL SQGRFGL+RLLERA V+QQD ARYLLTW PDTSQ I LKVQLRSE G Sbjct: 1074 WQTERGGLRTALDSQGRFGLVRLLERAKVAQQDGARYLLTWTPDTSQGIPLKVQLRSEAG 1133 Query: 181 RGPLDVLQLRGFALPARIFLTGTGKANTKIST 212 GPLDVLQLR FALP R+F+T K+ST Sbjct: 1134 AGPLDVLQLRSFALPTRVFVTSAASGGPKLST 1165 >ref|ZP_02381169.1| hypothetical protein BuboB_25845 [Burkholderia ubonensis Bu] Length = 1046 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 162/211 (76%), Positives = 186/211 (88%) Query: 1 MARFMRPDNGVIAQFVTTQLAGVIERRGDQWVAAQGADHEALTVDPAFLNSLNKMTQVST 60 MARFMRPDNGVIAQFV TQLAGV+ER+GD+WV AQGA+ ALT+DPAFL +LNK+T+++T Sbjct: 809 MARFMRPDNGVIAQFVATQLAGVVERQGDRWVVAQGANQGALTIDPAFLTALNKLTRIAT 868 Query: 61 ILFSSGDARVRYELQAIPTPGVTDMKFVLAGRTFHYFNQKQDWVPFEWPGQSIESLSHIE 120 +LF +GDARVRYELQA+ TPGVTDMKFVL+GR HYFNQKQ+WVPFEWPGQS+E+LSHIE Sbjct: 869 VLFPAGDARVRYELQAVQTPGVTDMKFVLSGRELHYFNQKQEWVPFEWPGQSLENLSHIE 928 Query: 121 WQTQQGGLRSALGSQGRFGLIRLLERATVSQQDSARYLLTWKPDTSQEIALKVQLRSEVG 180 WQT+QGGLR+AL SQGRFGLIRLLERA VSQQD+ARYLLTW PDTSQ I LKVQLRSE G Sbjct: 929 WQTEQGGLRTALDSQGRFGLIRLLERAKVSQQDNARYLLTWTPDTSQGIPLKVQLRSEAG 988 Query: 181 RGPLDVLQLRGFALPARIFLTGTGKANTKIS 211 GPLDVLQLR F+LP R+F+TG +S Sbjct: 989 AGPLDVLQLRNFSLPKRVFVTGAATGGPNLS 1019 >ref|YP_001810338.1| hypothetical protein BamMC406_3655 [Burkholderia ambifaria MC40-6] gb|ACB66122.1| protein of unknown function DUF1215 [Burkholderia ambifaria MC40-6] Length = 1272 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 162/212 (76%), Positives = 188/212 (88%) Query: 1 MARFMRPDNGVIAQFVTTQLAGVIERRGDQWVAAQGADHEALTVDPAFLNSLNKMTQVST 60 MARFMRPD+GVIAQFVT+QLAGV+ER+GD+WVAAQGAD ALT+DPAFL LNK+T+ ST Sbjct: 956 MARFMRPDSGVIAQFVTSQLAGVVERQGDRWVAAQGADSGALTIDPAFLTGLNKLTRTST 1015 Query: 61 ILFSSGDARVRYELQAIPTPGVTDMKFVLAGRTFHYFNQKQDWVPFEWPGQSIESLSHIE 120 +LF SGDARVRYEL+A PTPGVT+M+FVL+GR HYFNQKQ+W PFEWPGQS+E+LSHIE Sbjct: 1016 VLFPSGDARVRYELRAEPTPGVTNMRFVLSGRELHYFNQKQEWTPFEWPGQSLENLSHIE 1075 Query: 121 WQTQQGGLRSALGSQGRFGLIRLLERATVSQQDSARYLLTWKPDTSQEIALKVQLRSEVG 180 WQT+QGGLR+AL SQGRFGL+RLLERA V+QQD+ARYLLTW PDTSQ I LKVQLRSE G Sbjct: 1076 WQTEQGGLRTALDSQGRFGLVRLLERAKVTQQDNARYLLTWTPDTSQGIPLKVQLRSEAG 1135 Query: 181 RGPLDVLQLRGFALPARIFLTGTGKANTKIST 212 GPLDVLQLR F LP R+F+TG+ A ++ST Sbjct: 1136 GGPLDVLQLRNFTLPIRVFVTGSRSAGPRVST 1167 >ref|ZP_02888990.1| protein of unknown function DUF1215 [Burkholderia ambifaria IOP40-10] gb|EDT05425.1| protein of unknown function DUF1215 [Burkholderia ambifaria IOP40-10] Length = 1137 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 163/212 (76%), Positives = 187/212 (88%) Query: 1 MARFMRPDNGVIAQFVTTQLAGVIERRGDQWVAAQGADHEALTVDPAFLNSLNKMTQVST 60 MARFMRPD+GVIAQFVT+QLAGV+ER+GD+WVAAQGAD ALT+DPAFLN LNK+T+ ST Sbjct: 821 MARFMRPDSGVIAQFVTSQLAGVVERQGDRWVAAQGADSGALTIDPAFLNGLNKLTRTST 880 Query: 61 ILFSSGDARVRYELQAIPTPGVTDMKFVLAGRTFHYFNQKQDWVPFEWPGQSIESLSHIE 120 +LF SGD RVRYEL+A PTPGVTDM+FVL+GR HYFNQKQ W PFEWPGQS+E+LSHIE Sbjct: 881 VLFPSGDVRVRYELRAEPTPGVTDMRFVLSGRELHYFNQKQAWTPFEWPGQSLENLSHIE 940 Query: 121 WQTQQGGLRSALGSQGRFGLIRLLERATVSQQDSARYLLTWKPDTSQEIALKVQLRSEVG 180 WQT+QGGLR+AL SQGRFGL+RLLERA V+QQD+ARYLLTW PDTSQ I LKVQLRSE G Sbjct: 941 WQTEQGGLRTALDSQGRFGLVRLLERAQVTQQDNARYLLTWTPDTSQGIPLKVQLRSEAG 1000 Query: 181 RGPLDVLQLRGFALPARIFLTGTGKANTKIST 212 GPLDVLQLR F LP R+F+TG+ A ++ST Sbjct: 1001 GGPLDVLQLRNFTLPIRVFVTGSRSAGPRVST 1032 >ref|ZP_02905204.1| ImcF domain protein [Burkholderia ambifaria MEX-5] gb|EDT43671.1| ImcF domain protein [Burkholderia ambifaria MEX-5] Length = 1269 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 159/201 (79%), Positives = 183/201 (91%) Query: 1 MARFMRPDNGVIAQFVTTQLAGVIERRGDQWVAAQGADHEALTVDPAFLNSLNKMTQVST 60 MARFMRPD+GVIAQFVT+QLAGV+ER GD+WVAAQGAD ALT+DPAFLN LNK+T+ ST Sbjct: 954 MARFMRPDSGVIAQFVTSQLAGVVERHGDRWVAAQGADSGALTIDPAFLNGLNKLTRTST 1013 Query: 61 ILFSSGDARVRYELQAIPTPGVTDMKFVLAGRTFHYFNQKQDWVPFEWPGQSIESLSHIE 120 +LF SGDARVRYEL+A PTPG+TDM+FVL+GR HYFNQKQ+W PFEWPGQS+E+LSHIE Sbjct: 1014 VLFPSGDARVRYELRAEPTPGITDMRFVLSGRELHYFNQKQEWTPFEWPGQSLENLSHIE 1073 Query: 121 WQTQQGGLRSALGSQGRFGLIRLLERATVSQQDSARYLLTWKPDTSQEIALKVQLRSEVG 180 WQT+QGGLR+AL +QGRFGL+RLLERA V+QQD+ARYLLTW PDTSQ I L+VQLRSE G Sbjct: 1074 WQTEQGGLRTALDAQGRFGLVRLLERAKVTQQDNARYLLTWTPDTSQGIPLRVQLRSEAG 1133 Query: 181 RGPLDVLQLRGFALPARIFLT 201 GPLDVLQLR FALPAR+F+T Sbjct: 1134 AGPLDVLQLRHFALPARVFVT 1154