BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2892.p (414 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_02381168.1| hypothetical protein BuboB_25840 [Burkholderi... 450 e-124 ref|YP_001810337.1| hypothetical protein BamMC406_3654 [Burkhold... 409 e-112 ref|ZP_02905205.1| hypothetical protein BamMEX5DRAFT_0559 [Burkh... 383 e-104 ref|YP_003607780.1| hypothetical protein BC1002_4282 [Burkholder... 277 2e-72 ref|YP_002907927.1| hypothetical protein bglu_2g02200 [Burkholde... 124 2e-26 >ref|ZP_02381168.1| hypothetical protein BuboB_25840 [Burkholderia ubonensis Bu] Length = 412 Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 233/413 (56%), Positives = 305/413 (73%), Gaps = 2/413 (0%) Query: 1 MPVDFNRVPPQAEVPRPPQVSLIAWAVLLIFIEGVGASLTFVFWPSGRSSDSLWFWLCAL 60 MPVDFNRVPP+ EVP PPQVS+I W VLL+ + G GA LT + WP+GR +++LWFWLC Sbjct: 1 MPVDFNRVPPRVEVPPPPQVSMIIWTVLLVLVTGAGAGLTIMLWPTGRPTNTLWFWLCIA 60 Query: 61 AYPIMTWAFLLCSSLARRHAHRNQIIADNQLSSQAEAACHEEASQPLAILGHAWCISADD 120 YP M W FLLCS L +A RNQ IA N +S +AE ACH AS+PLAILGHAWC +A+D Sbjct: 61 GYPFMAWTFLLCSWLGYGYARRNQAIATNCVSDKAEQACHAMASRPLAILGHAWCFAAND 120 Query: 121 SDNSIDAVLRGSDLPRMRPSAAVAEMDVDARWLELPQMKFYPGNELSESARHHEICAWLI 180 S+NS+D +L G++L ++RPS AVA+ +V+ARWL++P+++F+PGNEL+E ARHH +C WL+ Sbjct: 121 SENSLDGILTGTELAKLRPSGAVADSEVNARWLDIPEIRFHPGNELAEHARHHAVCMWLL 180 Query: 181 ERLIDRCTLQLNALKAQVKLEIELVHRTRLESETVEAFIRQAIAKRVPALDVTFMSSEDQ 240 ERLIDR QLN L + KL++EL HR+RL+ E VE +R+ +A+RVP L V + E Sbjct: 181 ERLIDRLLPQLNTLPPRTKLQVELHHRSRLKFEAVETRLREVLAQRVPVLKVNVVPGE-H 239 Query: 241 SSSLFRTDAWFDHNGRDKAHLLISVVLLDAISTVLSGGVIEAGVALLVGPPRLVSPSSPS 300 + LFRTDAW D+ + A+LL++V L DAIS VLS GV EAGVALLVG PRL SP+ P Sbjct: 240 TIPLFRTDAWLDNRDVNTAYLLVAVELRDAISAVLSDGVAEAGVALLVGSPRLTSPAMPV 299 Query: 301 RTLRMHRPARGSFEAAAATIESAAYWGRSSQGAPRSSWTNGIAQNSLGEIRQAVPFLNDI 360 LR+HRPA+G+F+ A TIE AA WG+SS+ R+ W +G+ +S+ +RQA F ++ Sbjct: 300 -GLRLHRPAKGTFDTVARTIELAARWGQSSRDRLRTVWAHGLTSDSVSAVRQAASFPDET 358 Query: 361 QVNMLDAFVGDCSVAGPWMAIGLAAESALSTGSPQLVMCGDGNELSALVCRKQ 413 + L+ VGDCS GPW+A+ LAAESA +TG PQ+V CG+G EL ALVCRKQ Sbjct: 359 RWIALETSVGDCSGTGPWLAVALAAESARTTGDPQIVQCGEGKELIALVCRKQ 411 >ref|YP_001810337.1| hypothetical protein BamMC406_3654 [Burkholderia ambifaria MC40-6] gb|ACB66121.1| hypothetical protein BamMC406_3654 [Burkholderia ambifaria MC40-6] Length = 411 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 220/413 (53%), Positives = 292/413 (70%), Gaps = 3/413 (0%) Query: 1 MPVDFNRVPPQAEVPRPPQVSLIAWAVLLIFIEGVGASLTFVFWPSGRSSDSLWFWLCAL 60 MPVDFNRVPP+ EVP PPQ+S+I +LL + G G LT + WP+G +++LWFW C Sbjct: 1 MPVDFNRVPPRGEVPPPPQISMIVCTILLALVLGAGIGLTIMLWPAGLPTNTLWFWFCIA 60 Query: 61 AYPIMTWAFLLCSSLARRHAHRNQIIADNQLSSQAEAACHEEASQPLAILGHAWCISADD 120 YP++ WAFLL + L + RNQ IA N++S +AE A H AS+PLAILGHAWC + DD Sbjct: 61 GYPLLAWAFLLFAWLGYGYVRRNQAIATNRVSDEAEHARHALASRPLAILGHAWCFAVDD 120 Query: 121 SDNSIDAVLRGSDLPRMRPSAAVAEMDVDARWLELPQMKFYPGNELSESARHHEICAWLI 180 S+NS+ +L G++L RPS AVA+ +V ARWL++P F+PGNE++E ARHH +C WLI Sbjct: 121 SENSLKGILNGTEL-STRPSGAVADSEVHARWLDIPDQPFHPGNEVAEHARHHAVCTWLI 179 Query: 181 ERLIDRCTLQLNALKAQVKLEIELVHRTRLESETVEAFIRQAIAKRVPALDVTFMSSEDQ 240 ERL+D QL+AL + KL++EL H++RL+SE VE IR +IA RVP+L + E Sbjct: 180 ERLLDALLPQLSALPQRTKLQVELHHQSRLKSEAVEKRIRDSIAGRVPSLKIDLKQGE-H 238 Query: 241 SSSLFRTDAWFDHNGRDKAHLLISVVLLDAISTVLSGGVIEAGVALLVGPPRLVSPSSPS 300 SSLFR DAW D + HLLI+V L DAIS VLSGGV EAGVALLVG RL S + S Sbjct: 239 VSSLFRADAWLDKPDVNTVHLLIAVELRDAISAVLSGGVAEAGVALLVGQSRLASQVN-S 297 Query: 301 RTLRMHRPARGSFEAAAATIESAAYWGRSSQGAPRSSWTNGIAQNSLGEIRQAVPFLNDI 360 L +HRPA+ SF+AA T+ AA WG +S+ R+ WT+G+ +S+G +R+A F +++ Sbjct: 298 FGLWLHRPAKDSFDAATRTLGLAARWGHASRDRLRTVWTHGLTDDSVGAVRRAASFSDEM 357 Query: 361 QVNMLDAFVGDCSVAGPWMAIGLAAESALSTGSPQLVMCGDGNELSALVCRKQ 413 + N+L+ VGDCS AGPW+A+ LAAESA +TG Q+V+CG+G +L ALVCRKQ Sbjct: 358 RWNVLETLVGDCSGAGPWLAVALAAESAGTTGDTQMVLCGEGQDLIALVCRKQ 410 >ref|ZP_02905205.1| hypothetical protein BamMEX5DRAFT_0559 [Burkholderia ambifaria MEX-5] gb|EDT43672.1| hypothetical protein BamMEX5DRAFT_0559 [Burkholderia ambifaria MEX-5] Length = 412 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 202/414 (48%), Positives = 279/414 (67%), Gaps = 4/414 (0%) Query: 1 MPVDFNRVPPQAEVPRPPQVSLIAWAVLLIFIEGVGASLTFVFWPSGRSSDSLWFWLCAL 60 MP+DF+RVPP+ +VP PQVS + W +LL+ + G GA LT WP+ R +++LWFW C Sbjct: 1 MPIDFDRVPPRVKVPAAPQVSALVWTILLVLVMGAGAGLTIALWPTDRPANTLWFWFCVA 60 Query: 61 AYPIMTWAFLLCSSLARRHAHRNQIIADNQLSSQAEAACHEEASQPLAILGHAWCISADD 120 YP + WAFLL + L +A RNQ IA N++S A CH A++PL I+GHAWC+S +D Sbjct: 61 GYPFLAWAFLLFAWLGYGYACRNQAIATNRVSDDAAQTCHAMAAKPLTIVGHAWCVSTND 120 Query: 121 SDNSIDAVLRGSDLPRMRPSAAVAEMDVDARWLELPQMKFYPGNELSESARHHEICAWLI 180 S+NS+ +L G++ + R S AV + +V+ARWL LP ++FYPGNE+SE RHH +C WL+ Sbjct: 121 SENSLKQILTGAEGTKSRQSDAVTDREVNARWLNLPDIRFYPGNEISEYVRHHAVCTWLL 180 Query: 181 ERLIDRCTLQLNALKAQVKLEIELVHRTRLESETVEAFIRQAIAKRVPALDVTFMSSEDQ 240 +RLID QL AL +L +EL H++ LE E VE I +A++ PAL+V M + + Sbjct: 181 KRLIDGLQPQLRALPRGTRLYVELSHQSWLEHEVVETQILNLLAEQAPALNVE-MGAREP 239 Query: 241 SSSLFRTDAWFDHNGRDKAHLLISVVLLDAISTVLSGGVIEAGVALLVGPPRLVSPSSP- 299 + ++FR DAW D A+LL+++ L +AIS VLS GV EAGVALL+ R SSP Sbjct: 240 ALTVFRADAWHDDRDARSAYLLVAIELRNAISAVLSDGVAEAGVALLIRRSR--PESSPM 297 Query: 300 SRTLRMHRPARGSFEAAAATIESAAYWGRSSQGAPRSSWTNGIAQNSLGEIRQAVPFLND 359 S L +HRPA+GS ++ A T+E AA WG+S R+ WT+G+ + +G +RQA P +D Sbjct: 298 SAGLLLHRPAKGSLDSPAMTLELAARWGQSPSDGLRTVWTHGLIGDGIGSVRQAAPLPDD 357 Query: 360 IQVNMLDAFVGDCSVAGPWMAIGLAAESALSTGSPQLVMCGDGNELSALVCRKQ 413 + L+ VGDCS AGPW+A+ LAAE+A +TG PQLV+CG+ EL ALVCRKQ Sbjct: 358 ARWIALETAVGDCSGAGPWLAVALAAEAARTTGDPQLVLCGEDEELIALVCRKQ 411 >ref|YP_003607780.1| hypothetical protein BC1002_4282 [Burkholderia sp. CCGE1002] gb|ADG18269.1| conserved hypothetical protein [Burkholderia sp. CCGE1002] Length = 444 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 166/413 (40%), Positives = 231/413 (55%), Gaps = 1/413 (0%) Query: 1 MPVDFNRVPPQAEVPRPPQVSLIAWAVLLIFIEGVGASLTFVFWPSGRSSDSLWFWLCAL 60 MP+DF RVPP+ VP PPQ+S W LL+ + GA+LT V WP GR+ + +WFW C + Sbjct: 32 MPIDFARVPPRKAVPPPPQLSKRVWTALLVVLLCFGAALTLVLWPQGRTINPIWFWFCLV 91 Query: 61 AYPIMTWAFLLCSSLARRHAHRNQIIADNQLSSQAEAACHEEASQPLAILGHAWCISADD 120 YP+++W F+LC L HA R++ +A N +S CH AS PLA++GH W SA+ Sbjct: 92 GYPMLSWTFMLCLRLGYLHARRSEALAVNHVSDCEMERCHAIASVPLALIGHTWRFSANR 151 Query: 121 SDNSIDAVLRGSDLPRMRPSAAVAEMDVDARWLELPQMKFYPGNELSESARHHEICAWLI 180 +N + V+ GS + R A DVDARW+E+P + + GNEL+E +RH +C WL+ Sbjct: 152 DENDVQGVVDGSLRLKTRTGGAKPNTDVDARWIEIPNQEVHSGNELTEYSRHRLVCNWLL 211 Query: 181 ERLIDRCTLQLNALKAQVKLEIELVHRTRLESETVEAFIRQAIAKRVPALDVTFMSSEDQ 240 +LI+ T Q AL A L E V L+S V + + + + P L + S + Sbjct: 212 AQLIEDLTPQFAALSAGTTLHFEAVSHCALKSIDVSDRLEKLVIGKFPGLRMIAKPS-IE 270 Query: 241 SSSLFRTDAWFDHNGRDKAHLLISVVLLDAISTVLSGGVIEAGVALLVGPPRLVSPSSPS 300 SS+F TDA D HLL++V L +A+S L G EAGVALL+G P + S + Sbjct: 271 PSSVFGTDALLDSMRPGVVHLLVAVQLREAVSERLQDGAAEAGVALLLGHPSIAEKKSEA 330 Query: 301 RTLRMHRPARGSFEAAAATIESAAYWGRSSQGAPRSSWTNGIAQNSLGEIRQAVPFLNDI 360 L +HRPARG T+++A WG+++ + W++GI+ IR + Sbjct: 331 SALLLHRPARGQVNTIGETLDNAMRWGKATSANVGALWSHGISPEIEVAIRSSSQVDGKK 390 Query: 361 QVNMLDAFVGDCSVAGPWMAIGLAAESALSTGSPQLVMCGDGNELSALVCRKQ 413 L VGDC VAG W A LAAE A TG PQLV+ + +L ALVCRKQ Sbjct: 391 SRIDLRTTVGDCGVAGGWFATALAAEFAARTGDPQLVLTQEDRDLIALVCRKQ 443 >ref|YP_002907927.1| hypothetical protein bglu_2g02200 [Burkholderia glumae BGR1] gb|ACR30692.1| Hypothetical protein bglu_2g02200 [Burkholderia glumae BGR1] Length = 429 Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats. Identities = 113/420 (26%), Positives = 171/420 (40%), Gaps = 41/420 (9%) Query: 1 MPVDFNRVPPQAEVPRPPQVSLIAWAVLLIFIEGVGASLTFVFWPSGRSSDSLWFWLCAL 60 M +DF+ +PP+ VP P S W V+ + +G + WP+G S+ S WFW+C Sbjct: 1 MALDFDNLPPEERVPDTPP-SRFVWTVVFFVLTLLGIFAVLLLWPAGESTHSPWFWICIT 59 Query: 61 AYPIMTWAFLLCSSLARRHAHRNQIIADNQLSSQAEAACHEEASQPLAILGHAWCISADD 120 YP F++ + R +A N Q + S PL ILG A ++ DD Sbjct: 60 VYPTGIAGFVVSRVFSVYEGRRLDALAWNAACKQFAEQEFTQESIPLRILGAAIRVTEDD 119 Query: 121 SDNSIDAVLRGSDLPRMRPSAAVAEMDVDARWLELPQMKFYPGNELSESARHHEICAWLI 180 ++N + + + R S + V ARWL+ + E+ RH I WL Sbjct: 120 AENGVANIADRTMTLDARASDHSVDDSVAARWLQPIDARL----AADEAERHTLILEWLY 175 Query: 181 ERLIDRCTLQLNALKAQVKLEIEL-VHRTRLESETVEAF--------IRQAIAKRVPALD 231 ++L+ T + L A+V L + L V ++ VE + +R A +RVPA Sbjct: 176 DKLLVDLTESITPLPAEVPLRVLLDVSDYVGNADLVELWQAQWRNHNLRDARTQRVPA-- 233 Query: 232 VTFMSSEDQSSSLFRTDAWFDHNGRDKAH-------LLISVVLLDAISTVLSGGVIEAGV 284 L D W D G D A LLISV L ++ G EAG+ Sbjct: 234 ---------PLGLMTVDTWLD--GCDGASPLDRSAVLLISVSLSAVLNEDPPEGTAEAGI 282 Query: 285 ALLVGPPRLVSPSSPSRTLRMHRPARGSFEAAAATIESAAYWGRSSQGAPRSSWTNGIAQ 344 LL+ L + +HRP R E + A WG + + S+W G Sbjct: 283 GLLIASTALTARYKLRPIASLHRPLRSGNENLIHALTYALRWGYAKFDSLESAWMTGFDG 342 Query: 345 NSLGEIRQAV-------PFLNDIQVNMLDAFVGDCSVAGPWMAIGLAAESALSTGSPQLV 397 ++G + A+ P + LD VG ++ W+ A A S+ +PQLV Sbjct: 343 ETVGPLHTAMSHVGGGKPRNEPLPEIDLDRSVGRAGLSAGWLTATCAVLRAASSATPQLV 402