BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2887.p (537 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04942212.1| hypothetical protein BCPG_03745 [Burkholderia... 984 0.0 ref|ZP_04947389.1| hypothetical protein BDAG_03360 [Burkholderia... 977 0.0 gb|EGD01692.1| hypothetical protein B1M_25337 [Burkholderia sp. ... 972 0.0 ref|YP_002908733.1| EvpB family type VI secretion protein [Burkh... 962 0.0 ref|YP_002907920.1| EvpB family type VI secretion protein [Burkh... 961 0.0 >ref|ZP_04942212.1| hypothetical protein BCPG_03745 [Burkholderia cenocepacia PC184] gb|EAY65383.1| hypothetical protein BCPG_03745 [Burkholderia cenocepacia PC184] Length = 510 Score = 984 bits (2545), Expect = 0.0, Method: Composition-based stats. Identities = 473/510 (92%), Positives = 496/510 (97%) Query: 28 MKHNKASQASSEAMVLENDSVYATLCNKINLKPVVEARPIEAFRDNDTLSEASADERVAR 87 MK N++ Q ++E +VLENDSVYA+LC+KINLKPV EARP+EAFRDND LSEASADERVAR Sbjct: 1 MKQNESRQGATETVVLENDSVYASLCSKINLKPVAEARPLEAFRDNDALSEASADERVAR 60 Query: 88 GMDTLLNLIARESRSVDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM 147 GMD LLNLIA+ESR VDRLDKSLLDFYIGQLDRQI RQLDAVMHTPEFQALEGRWRGLKM Sbjct: 61 GMDALLNLIAQESRPVDRLDKSLLDFYIGQLDRQIGRQLDAVMHTPEFQALEGRWRGLKM 120 Query: 148 LVSRTDFRKNARIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 207 LVSRTDFRKNARIEVLDVSK+ALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMI Sbjct: 121 LVSRTDFRKNARIEVLDVSKDALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIG 180 Query: 208 DFEFTHLPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKKSMEEVAAIQDIANYFDRAEY 267 DFEFT+ PQD+ALLRN+SKVAAAAHMPFIGSVG AFFGK+SMEEV+AIQDI NYFDRAEY Sbjct: 181 DFEFTNSPQDVALLRNVSKVAAAAHMPFIGSVGAAFFGKQSMEEVSAIQDIGNYFDRAEY 240 Query: 268 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWMNASFA 327 IKWKSFR+TDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLW+NASFA Sbjct: 241 IKWKSFRDTDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWVNASFA 300 Query: 328 FAANMVRSFVTNGWCVQIRGPQAGGKVDDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 387 FAANMVRSFV NGWCVQIRGPQAGGKV+DLPVHLYDLGTGVQPKIPTEVLIPETREFEFA Sbjct: 301 FAANMVRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 360 Query: 388 NLGFIPLSFYKNHDFACFFSASSTQKPSLYETKEATANSRINARLPYIFLLSRIAHYLKL 447 NLGFIPLSFYKNHDFACFFSASSTQKP+LYETKEATANSRINARLPYIFLLSRIAHYLKL Sbjct: 361 NLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSRINARLPYIFLLSRIAHYLKL 420 Query: 448 IQRENIGTTKDRRLLELELNHWVKGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF 507 IQRENIGTTKDRRLLELELN+W+KGLVTEMKDPGDELQASHPLR+AKVTVEDIEDNPGFF Sbjct: 421 IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPGDELQASHPLRDAKVTVEDIEDNPGFF 480 Query: 508 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 537 RIKLFI+PHFQVEGMDIGLSLVSQMPKAKS Sbjct: 481 RIKLFIVPHFQVEGMDIGLSLVSQMPKAKS 510 >ref|ZP_04947389.1| hypothetical protein BDAG_03360 [Burkholderia dolosa AUO158] gb|EAY70560.1| hypothetical protein BDAG_03360 [Burkholderia dolosa AUO158] Length = 520 Score = 977 bits (2525), Expect = 0.0, Method: Composition-based stats. Identities = 469/510 (91%), Positives = 494/510 (96%) Query: 28 MKHNKASQASSEAMVLENDSVYATLCNKINLKPVVEARPIEAFRDNDTLSEASADERVAR 87 MK N+A Q ++E +VLENDSVYA+LC+KINL + EARP+EAFRDNDTLSEASADERVAR Sbjct: 11 MKQNEAHQGATETVVLENDSVYASLCSKINLNTIAEARPLEAFRDNDTLSEASADERVAR 70 Query: 88 GMDTLLNLIARESRSVDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM 147 GMD LLNLIA+ES+ VDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM Sbjct: 71 GMDALLNLIAKESKPVDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM 130 Query: 148 LVSRTDFRKNARIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 207 LVSRTDFR+NA+IEVLDVSK+ALQRDFED PEL+QSGLYRLTYIEEYDTPGGQPISAMIS Sbjct: 131 LVSRTDFRRNAKIEVLDVSKDALQRDFEDAPELVQSGLYRLTYIEEYDTPGGQPISAMIS 190 Query: 208 DFEFTHLPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKKSMEEVAAIQDIANYFDRAEY 267 DFEFT+ P D+ALLRNISKVAAAAHMPFIGSVG AFFGKKSMEEVAAIQDI NYFDRAEY Sbjct: 191 DFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKKSMEEVAAIQDIGNYFDRAEY 250 Query: 268 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWMNASFA 327 IKWKSFR+TDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLW+NASFA Sbjct: 251 IKWKSFRDTDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWVNASFA 310 Query: 328 FAANMVRSFVTNGWCVQIRGPQAGGKVDDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 387 FAANM RSFV NGWCVQIRGPQAGGKV+DLP+HLYDLGTGVQPKIPTEVLIPETREFEFA Sbjct: 311 FAANMARSFVNNGWCVQIRGPQAGGKVEDLPLHLYDLGTGVQPKIPTEVLIPETREFEFA 370 Query: 388 NLGFIPLSFYKNHDFACFFSASSTQKPSLYETKEATANSRINARLPYIFLLSRIAHYLKL 447 NLGFIPLSFYKNHDFACFFSA+STQKP+LYET+EATANSRINARLPYIFLLSRIAHYLKL Sbjct: 371 NLGFIPLSFYKNHDFACFFSANSTQKPALYETREATANSRINARLPYIFLLSRIAHYLKL 430 Query: 448 IQRENIGTTKDRRLLELELNHWVKGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF 507 IQRENIGTTKDRRLLELELN+W+KGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF Sbjct: 431 IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF 490 Query: 508 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 537 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS Sbjct: 491 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 520 >gb|EGD01692.1| hypothetical protein B1M_25337 [Burkholderia sp. TJI49] Length = 510 Score = 973 bits (2514), Expect = 0.0, Method: Composition-based stats. Identities = 469/509 (92%), Positives = 491/509 (96%) Query: 28 MKHNKASQASSEAMVLENDSVYATLCNKINLKPVVEARPIEAFRDNDTLSEASADERVAR 87 MK N++ Q ++E +VLE DSVYA+LCNKINLKPV EARP+EAFRDND LSEAS DERVAR Sbjct: 1 MKQNESRQGATETVVLEADSVYASLCNKINLKPVAEARPLEAFRDNDALSEASPDERVAR 60 Query: 88 GMDTLLNLIARESRSVDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM 147 GMD LLNLIA E R VDRLDKSLLDFYIGQLDR+ISRQLDAVMH PEFQALEGRWRGLKM Sbjct: 61 GMDALLNLIANERRPVDRLDKSLLDFYIGQLDRKISRQLDAVMHAPEFQALEGRWRGLKM 120 Query: 148 LVSRTDFRKNARIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 207 LVSRTDFRKNA+IEVLDVSK+ALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS Sbjct: 121 LVSRTDFRKNAKIEVLDVSKDALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 180 Query: 208 DFEFTHLPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKKSMEEVAAIQDIANYFDRAEY 267 DFEFT+ P D+ALLRNISKVAAAAHMPFIGSVG AFFGKKSMEEVAAIQDI NYFDRAEY Sbjct: 181 DFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKKSMEEVAAIQDIGNYFDRAEY 240 Query: 268 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWMNASFA 327 IKWKSFR+TDDARYVGLTMPRVLGRLPYGKDTTPVRAFNY+EAVKGPDHDKYLW+NASFA Sbjct: 241 IKWKSFRDTDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYDEAVKGPDHDKYLWVNASFA 300 Query: 328 FAANMVRSFVTNGWCVQIRGPQAGGKVDDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 387 FAANMVRSFV NGWCVQIRGPQAGGKV+DLPVHLYDLGTGVQPKIPTEVLIPETREFEFA Sbjct: 301 FAANMVRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 360 Query: 388 NLGFIPLSFYKNHDFACFFSASSTQKPSLYETKEATANSRINARLPYIFLLSRIAHYLKL 447 NLGFIPLSFYKNHDFACFFSA+STQ+P+LYETKEATANSRINARLPYIFLLSRIAHYLKL Sbjct: 361 NLGFIPLSFYKNHDFACFFSANSTQRPALYETKEATANSRINARLPYIFLLSRIAHYLKL 420 Query: 448 IQRENIGTTKDRRLLELELNHWVKGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF 507 IQRENIGTTKDRRLLELELN+W+KGLVTEMKDPGDELQASHPLR+AKVTVEDIEDNPGFF Sbjct: 421 IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPGDELQASHPLRDAKVTVEDIEDNPGFF 480 Query: 508 RIKLFIIPHFQVEGMDIGLSLVSQMPKAK 536 RIKLFIIPHFQVEGMDIGLSLVSQMPKAK Sbjct: 481 RIKLFIIPHFQVEGMDIGLSLVSQMPKAK 509 >ref|YP_002908733.1| EvpB family type VI secretion protein [Burkholderia glumae BGR1] gb|ACR31498.1| type VI secretion protein, EvpB/VC_A0108 family [Burkholderia glumae BGR1] Length = 510 Score = 962 bits (2487), Expect = 0.0, Method: Composition-based stats. Identities = 464/510 (90%), Positives = 490/510 (96%) Query: 28 MKHNKASQASSEAMVLENDSVYATLCNKINLKPVVEARPIEAFRDNDTLSEASADERVAR 87 MK N++ Q +E +VLENDSVYA+LC+KINL PV EARP+EAFRDND LSEASADER+AR Sbjct: 1 MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIAR 60 Query: 88 GMDTLLNLIARESRSVDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM 147 GM L+LIA+ S+ V+RLDKSLLDF+IGQLDRQISRQLDAVMHTP FQALEGRWRGLKM Sbjct: 61 GMSAFLDLIAQSSQPVERLDKSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKM 120 Query: 148 LVSRTDFRKNARIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 207 LV+RTDFRKNA+IEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS Sbjct: 121 LVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 180 Query: 208 DFEFTHLPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKKSMEEVAAIQDIANYFDRAEY 267 DFEFT+ P D+ALLRNISKVAAAAHMPFIGSVG AFFGK+SMEEVAAIQDI NYFDRAEY Sbjct: 181 DFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY 240 Query: 268 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWMNASFA 327 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHD+YLW+NASFA Sbjct: 241 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFA 300 Query: 328 FAANMVRSFVTNGWCVQIRGPQAGGKVDDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 387 FAANMVRSFV NGWCVQIRGPQAGGKV+DLPVHLYDLGTGVQPKIPTEVLIPETREFEFA Sbjct: 301 FAANMVRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 360 Query: 388 NLGFIPLSFYKNHDFACFFSASSTQKPSLYETKEATANSRINARLPYIFLLSRIAHYLKL 447 NLGFIPLSFYKNHDFACFFSASSTQKP+LYETKEATANSRINARLPYIFLLSRIAHYLKL Sbjct: 361 NLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSRINARLPYIFLLSRIAHYLKL 420 Query: 448 IQRENIGTTKDRRLLELELNHWVKGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF 507 IQRENIGTTKDRRLLELELN+W+KGLVTEMKDP DELQASHPLR+AKVTVEDI+DNPGFF Sbjct: 421 IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF 480 Query: 508 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 537 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS Sbjct: 481 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 510 >ref|YP_002907920.1| EvpB family type VI secretion protein [Burkholderia glumae BGR1] gb|ACR30685.1| type VI secretion protein, EvpB/VC_A0108 family [Burkholderia glumae BGR1] Length = 510 Score = 961 bits (2485), Expect = 0.0, Method: Composition-based stats. Identities = 463/510 (90%), Positives = 490/510 (96%) Query: 28 MKHNKASQASSEAMVLENDSVYATLCNKINLKPVVEARPIEAFRDNDTLSEASADERVAR 87 MK N++ Q +E +VLENDSVYA+LC+KINL PV EARP+EAFRDND LSEASADER+AR Sbjct: 1 MKQNESRQGVNETVVLENDSVYASLCSKINLTPVAEARPLEAFRDNDMLSEASADERIAR 60 Query: 88 GMDTLLNLIARESRSVDRLDKSLLDFYIGQLDRQISRQLDAVMHTPEFQALEGRWRGLKM 147 GM L+LIA+ S+ V+RLDKSLLDF+IGQLDRQISRQLDAVMHTP FQALEGRWRGLK+ Sbjct: 61 GMSAFLDLIAQSSQPVERLDKSLLDFHIGQLDRQISRQLDAVMHTPAFQALEGRWRGLKL 120 Query: 148 LVSRTDFRKNARIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 207 LV+RTDFRKNA+IEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS Sbjct: 121 LVARTDFRKNAKIEVLDVSKEALQRDFEDTPELIQSGLYRLTYIEEYDTPGGQPISAMIS 180 Query: 208 DFEFTHLPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKKSMEEVAAIQDIANYFDRAEY 267 DFEFT+ P D+ALLRNISKVAAAAHMPFIGSVG AFFGK+SMEEVAAIQDI NYFDRAEY Sbjct: 181 DFEFTNSPMDVALLRNISKVAAAAHMPFIGSVGAAFFGKQSMEEVAAIQDIGNYFDRAEY 240 Query: 268 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDKYLWMNASFA 327 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHD+YLW+NASFA Sbjct: 241 IKWKSFRETDDARYVGLTMPRVLGRLPYGKDTTPVRAFNYEEAVKGPDHDRYLWVNASFA 300 Query: 328 FAANMVRSFVTNGWCVQIRGPQAGGKVDDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 387 FAANMVRSFV NGWCVQIRGPQAGGKV+DLPVHLYDLGTGVQPKIPTEVLIPETREFEFA Sbjct: 301 FAANMVRSFVNNGWCVQIRGPQAGGKVEDLPVHLYDLGTGVQPKIPTEVLIPETREFEFA 360 Query: 388 NLGFIPLSFYKNHDFACFFSASSTQKPSLYETKEATANSRINARLPYIFLLSRIAHYLKL 447 NLGFIPLSFYKNHDFACFFSASSTQKP+LYETKEATANSRINARLPYIFLLSRIAHYLKL Sbjct: 361 NLGFIPLSFYKNHDFACFFSASSTQKPALYETKEATANSRINARLPYIFLLSRIAHYLKL 420 Query: 448 IQRENIGTTKDRRLLELELNHWVKGLVTEMKDPGDELQASHPLREAKVTVEDIEDNPGFF 507 IQRENIGTTKDRRLLELELN+W+KGLVTEMKDP DELQASHPLR+AKVTVEDI+DNPGFF Sbjct: 421 IQRENIGTTKDRRLLELELNNWIKGLVTEMKDPDDELQASHPLRDAKVTVEDIDDNPGFF 480 Query: 508 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 537 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS Sbjct: 481 RIKLFIIPHFQVEGMDIGLSLVSQMPKAKS 510