BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2886.p         (170 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_04947390.1| hypothetical protein BDAG_03361 [Burkholderia...   283   6e-75
ref|ZP_04942213.1| hypothetical protein BCPG_03746 [Burkholderia...   283   8e-75
ref|YP_003607784.1| type VI secretion protein, VC_A0107 family [...   280   4e-74
ref|YP_002908734.1| type VI secretion protein [Burkholderia glum...   277   3e-73
ref|ZP_02380536.1| hypothetical protein BuboB_22572 [Burkholderi...   277   3e-73

>ref|ZP_04947390.1| hypothetical protein BDAG_03361 [Burkholderia dolosa AUO158]
 gb|EAY70561.1| hypothetical protein BDAG_03361 [Burkholderia dolosa AUO158]
          Length = 170

 Score =  283 bits (724), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 158/170 (92%), Positives = 164/170 (96%)

Query: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQTPLAERKKVNIDKN 60
           MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQ PLAERKKVNIDKN
Sbjct: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQAPLAERKKVNIDKN 60

Query: 61  NFDAVLADYAPDLKIAAENTLAGDGTELPVKLSLRSMKDFEPEQVARQIPELQAMLAMRN 120
           NFDAVLADYAPDL IAAENTLAGDG+ELPV LS RSMKDFEPEQVARQIPE+QA+LAMRN
Sbjct: 61  NFDAVLADYAPDLTIAAENTLAGDGSELPVNLSFRSMKDFEPEQVARQIPEMQALLAMRN 120

Query: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLTDKLRAELAQIVTAATQQEGHA 170
           LLRDLKSNLLDNGTFRREFEKILKDKRL+DKLR+ELAQ+ TAATQ EGHA
Sbjct: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLSDKLRSELAQVATAATQPEGHA 170


>ref|ZP_04942213.1| hypothetical protein BCPG_03746 [Burkholderia cenocepacia PC184]
 gb|EAY65384.1| hypothetical protein BCPG_03746 [Burkholderia cenocepacia PC184]
          Length = 170

 Score =  283 bits (723), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 158/170 (92%), Positives = 164/170 (96%)

Query: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQTPLAERKKVNIDKN 60
           MDSFQREIPKSRVSITLDLHTGGA+KKVELPLKLLVAGDFSAGREQ PLAERKKVNIDKN
Sbjct: 1   MDSFQREIPKSRVSITLDLHTGGARKKVELPLKLLVAGDFSAGREQAPLAERKKVNIDKN 60

Query: 61  NFDAVLADYAPDLKIAAENTLAGDGTELPVKLSLRSMKDFEPEQVARQIPELQAMLAMRN 120
           NFDAVLAD+APDL IAAENTLAGDG+ELPV LS RSMKDFEPEQVARQIPELQAMLAMRN
Sbjct: 61  NFDAVLADHAPDLDIAAENTLAGDGSELPVNLSFRSMKDFEPEQVARQIPELQAMLAMRN 120

Query: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLTDKLRAELAQIVTAATQQEGHA 170
           LLRDLKSNLLDNGTFRREFEKILKDKRL+D+LR EL+QIVTAATQ EGHA
Sbjct: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLSDRLRGELSQIVTAATQPEGHA 170


>ref|YP_003607784.1| type VI secretion protein, VC_A0107 family [Burkholderia sp.
           CCGE1002]
 gb|ADG18273.1| type VI secretion protein, VC_A0107 family [Burkholderia sp.
           CCGE1002]
          Length = 170

 Score =  280 bits (717), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 156/170 (91%), Positives = 164/170 (96%)

Query: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQTPLAERKKVNIDKN 60
           MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQ PLAER KVNID+N
Sbjct: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQAPLAERTKVNIDRN 60

Query: 61  NFDAVLADYAPDLKIAAENTLAGDGTELPVKLSLRSMKDFEPEQVARQIPELQAMLAMRN 120
           NFDAVLAD+APDLKIAAENTLAGDG+ELPVKL+ RSMKDFEPEQVARQIPELQA+LAMRN
Sbjct: 61  NFDAVLADHAPDLKIAAENTLAGDGSELPVKLAFRSMKDFEPEQVARQIPELQALLAMRN 120

Query: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLTDKLRAELAQIVTAATQQEGHA 170
           LLRDLKSNLLDNGTFRREFEK+LKDKRL+D+LR ELAQI TAATQ EGHA
Sbjct: 121 LLRDLKSNLLDNGTFRREFEKVLKDKRLSDRLRGELAQIATAATQPEGHA 170


>ref|YP_002908734.1| type VI secretion protein [Burkholderia glumae BGR1]
 gb|ACR31499.1| type VI secretion protein, VC_A0107 family [Burkholderia glumae
           BGR1]
          Length = 170

 Score =  277 bits (709), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 155/170 (91%), Positives = 162/170 (95%)

Query: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQTPLAERKKVNIDKN 60
           MDSFQREIPKSRVSITLDLHTGGA+KKVELPLKLLVAGDFSAGREQ PLAERKK+NIDKN
Sbjct: 1   MDSFQREIPKSRVSITLDLHTGGARKKVELPLKLLVAGDFSAGREQAPLAERKKINIDKN 60

Query: 61  NFDAVLADYAPDLKIAAENTLAGDGTELPVKLSLRSMKDFEPEQVARQIPELQAMLAMRN 120
           NFDAVLADYAPDLKI+AENTLAGDG+ LPV LS RSMKDFEPEQVARQIPELQAMLAMRN
Sbjct: 61  NFDAVLADYAPDLKISAENTLAGDGSALPVNLSFRSMKDFEPEQVARQIPELQAMLAMRN 120

Query: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLTDKLRAELAQIVTAATQQEGHA 170
           LLRDLKSNLLDNGTFRREFEKILKDK L+DKLR+ELAQ+ TAATQ EG A
Sbjct: 121 LLRDLKSNLLDNGTFRREFEKILKDKHLSDKLRSELAQVATAATQPEGQA 170


>ref|ZP_02380536.1| hypothetical protein BuboB_22572 [Burkholderia ubonensis Bu]
          Length = 170

 Score =  277 bits (709), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 155/170 (91%), Positives = 162/170 (95%)

Query: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQTPLAERKKVNIDKN 60
           MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQ PLAERKKVNIDKN
Sbjct: 1   MDSFQREIPKSRVSITLDLHTGGAQKKVELPLKLLVAGDFSAGREQAPLAERKKVNIDKN 60

Query: 61  NFDAVLADYAPDLKIAAENTLAGDGTELPVKLSLRSMKDFEPEQVARQIPELQAMLAMRN 120
           NFDAVLADYAPDLKIAA+NTLAGDG+EL   LS RS+KDFEPEQVARQIPELQA+LAMRN
Sbjct: 61  NFDAVLADYAPDLKIAADNTLAGDGSELAANLSFRSIKDFEPEQVARQIPELQALLAMRN 120

Query: 121 LLRDLKSNLLDNGTFRREFEKILKDKRLTDKLRAELAQIVTAATQQEGHA 170
           LLRDLKSNLLDNGTFRREFEK+LKDKRL+DKLR EL+QI TAATQ EGHA
Sbjct: 121 LLRDLKSNLLDNGTFRREFEKVLKDKRLSDKLRGELSQIATAATQPEGHA 170