BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2885.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04947391.1| hypothetical protein BDAG_03362 [Burkholderia... 440 e-121 ref|YP_002908735.1| type VI secretion protein [Burkholderia glum... 438 e-121 ref|ZP_04942214.1| hypothetical protein BCPG_03747 [Burkholderia... 429 e-118 ref|YP_003607785.1| type VI secretion protein, VC_A0114 family [... 428 e-118 gb|EGD01690.1| hypothetical protein B1M_25327 [Burkholderia sp. ... 411 e-113 >ref|ZP_04947391.1| hypothetical protein BDAG_03362 [Burkholderia dolosa AUO158] gb|EAY70562.1| hypothetical protein BDAG_03362 [Burkholderia dolosa AUO158] Length = 450 Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 216/274 (78%), Positives = 240/274 (87%) Query: 1 MRIEKPLWHEGLILTPQHFQQQDRWSQFALHQHASAALAEPWGTLAVEVDEEALATSRLK 60 MRI+KPLWHEGLILT QHFQQQDRW+ FA+ Q A AALAEPWG L VE+DEEALAT RLK Sbjct: 1 MRIDKPLWHEGLILTQQHFQQQDRWAGFAMQQLAGAALAEPWGALGVEIDEEALATGRLK 60 Query: 61 LTRLKLCFPDGTLIDTGVADSLPSARDLLQAIPAERQSVIVLAALAMTDANGSNCRLDEA 120 LTRLKL FPDGT +DT VAD++P ARDL Q +PA+ QSV+VLAALA+ DANG+NCR DE Sbjct: 61 LTRLKLRFPDGTPVDTTVADTIPPARDLTQGVPADLQSVVVLAALALPDANGNNCRFDEV 120 Query: 121 VITRPRRAYREFVKVMDLNGTSATEIAVERRAVRLLFDFESHADDTVCAIARLTRGANGQ 180 + RPRRAYREFVKV DLNGT +EIAVER AVRLLFDFESHADDTVCA+ARLTR +GQ Sbjct: 121 TLARPRRAYREFVKVTDLNGTGESEIAVERHAVRLLFDFESHADDTVCAVARLTRSTSGQ 180 Query: 181 FQLDSRFVPPCLTLGSHRLHLERVSRLVDILHAKSLALSARRGERIEQVAEYGVADVQLF 240 FQ+D RFVPPCLTL SH LH+ER++RL DIL AKSLAL ARR ERIEQVAEYGVADVQLF Sbjct: 181 FQVDHRFVPPCLTLASHTLHIERINRLADILQAKSLALGARRSERIEQVAEYGVADVQLF 240 Query: 241 WLLHCIHAAWPQLRLFATHPSRSPESLYVTLSQL 274 WLLHCIHAAWPQLRL+A+HP+RSPE LYVTL+QL Sbjct: 241 WLLHCIHAAWPQLRLYASHPNRSPEHLYVTLAQL 274 >ref|YP_002908735.1| type VI secretion protein [Burkholderia glumae BGR1] gb|ACR31500.1| type VI secretion protein, VC_A0114 family [Burkholderia glumae BGR1] Length = 450 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 217/274 (79%), Positives = 240/274 (87%) Query: 1 MRIEKPLWHEGLILTPQHFQQQDRWSQFALHQHASAALAEPWGTLAVEVDEEALATSRLK 60 MRI+KPLWHEGL+LT QHFQQQDRW+ FA+ Q A+AALAEPWGTL VEVDEEALAT RLK Sbjct: 1 MRIDKPLWHEGLVLTQQHFQQQDRWAGFAMQQVAAAALAEPWGTLGVEVDEEALATGRLK 60 Query: 61 LTRLKLCFPDGTLIDTGVADSLPSARDLLQAIPAERQSVIVLAALAMTDANGSNCRLDEA 120 LTRLKL FPDGT +DT +AD +P AR+L Q +PA+ QSV+VLAALA+ DANG+NCR DE Sbjct: 61 LTRLKLRFPDGTPVDTTMADEVPPARELTQGMPADCQSVVVLAALALPDANGNNCRFDET 120 Query: 121 VITRPRRAYREFVKVMDLNGTSATEIAVERRAVRLLFDFESHADDTVCAIARLTRGANGQ 180 + RPRR+YREFVKV DLNGT +EIA ER AVRLLFDFESHADDTVCA+ARLTR +G Sbjct: 121 TLARPRRSYREFVKVTDLNGTGESEIAAERHAVRLLFDFESHADDTVCAVARLTRSTSGL 180 Query: 181 FQLDSRFVPPCLTLGSHRLHLERVSRLVDILHAKSLALSARRGERIEQVAEYGVADVQLF 240 FQ+D RFVPPCLTLGSHRLHLERV+RL DIL AKSLAL ARR ERIEQVAEYGVADVQLF Sbjct: 181 FQVDHRFVPPCLTLGSHRLHLERVNRLADILQAKSLALGARRSERIEQVAEYGVADVQLF 240 Query: 241 WLLHCIHAAWPQLRLFATHPSRSPESLYVTLSQL 274 WLLHCIHAAWPQLRLFATHP+R PE LYVTL+QL Sbjct: 241 WLLHCIHAAWPQLRLFATHPNRPPEHLYVTLAQL 274 >ref|ZP_04942214.1| hypothetical protein BCPG_03747 [Burkholderia cenocepacia PC184] gb|EAY65385.1| hypothetical protein BCPG_03747 [Burkholderia cenocepacia PC184] Length = 450 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 219/274 (79%), Positives = 241/274 (87%) Query: 1 MRIEKPLWHEGLILTPQHFQQQDRWSQFALHQHASAALAEPWGTLAVEVDEEALATSRLK 60 MRI+KPL+HEGLILT QHFQQQ RW+ FALHQ A+AALA+PWGTL VEVDEEALAT RLK Sbjct: 1 MRIDKPLFHEGLILTQQHFQQQARWAGFALHQFATAALAQPWGTLGVEVDEEALATGRLK 60 Query: 61 LTRLKLCFPDGTLIDTGVADSLPSARDLLQAIPAERQSVIVLAALAMTDANGSNCRLDEA 120 LT LKL FPDGT IDT +AD+LPSARDL Q +P +RQ+V+V AALA+ DANG+NCR DE Sbjct: 61 LTLLKLRFPDGTPIDTTLADALPSARDLTQGVPTDRQNVVVFAALALPDANGNNCRFDET 120 Query: 121 VITRPRRAYREFVKVMDLNGTSATEIAVERRAVRLLFDFESHADDTVCAIARLTRGANGQ 180 + RPRR+YREFVKVMDLNGT EIA ER A+RLLFDFESHADDTVCAIARLTRG NGQ Sbjct: 121 TLARPRRSYREFVKVMDLNGTGEAEIAAERHAMRLLFDFESHADDTVCAIARLTRGTNGQ 180 Query: 181 FQLDSRFVPPCLTLGSHRLHLERVSRLVDILHAKSLALSARRGERIEQVAEYGVADVQLF 240 FQ+D +FVPPCLTLGSH LH+ER+ RL DILHAKSLAL ARR ER+EQVAEYGVADVQLF Sbjct: 181 FQVDRQFVPPCLTLGSHPLHIERIDRLADILHAKSLALGARRSERLEQVAEYGVADVQLF 240 Query: 241 WLLHCIHAAWPQLRLFATHPSRSPESLYVTLSQL 274 WLLHCIHAAWPQLRLFATHPSRSPE LY TL+QL Sbjct: 241 WLLHCIHAAWPQLRLFATHPSRSPEHLYATLAQL 274 >ref|YP_003607785.1| type VI secretion protein, VC_A0114 family [Burkholderia sp. CCGE1002] gb|ADG18274.1| type VI secretion protein, VC_A0114 family [Burkholderia sp. CCGE1002] Length = 450 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 215/276 (77%), Positives = 240/276 (86%), Gaps = 1/276 (0%) Query: 1 MRIEKPLWHEGLILTPQHFQQQDRWSQFALHQHASAALAEPWGTLAVEVDEEALATSRLK 60 MRI+KPLWHEGLILT QHFQQQ+RW+ FAL Q A+ ALAEPWGTL VEVDEEALAT RLK Sbjct: 1 MRIDKPLWHEGLILTQQHFQQQERWAGFALQQFATCALAEPWGTLGVEVDEEALATGRLK 60 Query: 61 LTRLKLCFPDGTLIDTGVADSLPSARDLLQAIPAERQSVIVLAALAMTDANGSNCRLDEA 120 LTRLKL F DGT IDT ++D+LP+ARDL + +PA+ QSV+VLAALA+ DANG+NCR DE Sbjct: 61 LTRLKLRFADGTPIDTTLSDALPAARDLTKGMPADLQSVVVLAALALPDANGNNCRFDET 120 Query: 121 VITRPRRAYREFVKVMDLNGTSATEIAVERRAVRLLFDFESHADDTVCAIARLTR-GANG 179 + RPRRAYREFVKV+DLNG S TEIA ER AVRLLFDFESHADDTVCAIARLTR +G Sbjct: 121 SLARPRRAYREFVKVVDLNGGSETEIASERHAVRLLFDFESHADDTVCAIARLTRTTTSG 180 Query: 180 QFQLDSRFVPPCLTLGSHRLHLERVSRLVDILHAKSLALSARRGERIEQVAEYGVADVQL 239 QFQ+D RFVPPCLTLGSH LHLER++RL DIL AKS+ L ARR ER+EQVAEYGVADVQL Sbjct: 181 QFQVDHRFVPPCLTLGSHPLHLERINRLADILQAKSVVLGARRNERLEQVAEYGVADVQL 240 Query: 240 FWLLHCIHAAWPQLRLFATHPSRSPESLYVTLSQLI 275 FWLLHCIHAAWPQLRL+ATHP RSPE LY TL+QL+ Sbjct: 241 FWLLHCIHAAWPQLRLYATHPRRSPEQLYTTLAQLV 276 >gb|EGD01690.1| hypothetical protein B1M_25327 [Burkholderia sp. TJI49] Length = 454 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 214/278 (76%), Positives = 238/278 (85%), Gaps = 4/278 (1%) Query: 1 MRIEKPLWHEGLILTPQHFQQQDRWSQFALHQHASAALAEPWGTLAVEVDEEALATSRLK 60 MRI+KPLWHEGLILT QHFQQQ+RW+ FA+ Q A+AALAEPWGTL+VEVDEEALAT RLK Sbjct: 1 MRIDKPLWHEGLILTQQHFQQQERWAGFAMQQFAAAALAEPWGTLSVEVDEEALATGRLK 60 Query: 61 LTRLKLCFPDGTLIDTGVADSLPSARDLLQAIPAERQSVIVLAALAMTDANGSNCRLDEA 120 LTRLKL FPDGT +DT +AD++P ARDL Q +PA+ QSV+VLAALA+ DANG+NCR DE Sbjct: 61 LTRLKLRFPDGTPVDTTIADNIPPARDLTQGVPADLQSVVVLAALALPDANGNNCRFDET 120 Query: 121 VITRPRRAYREFVKVMDLNGTSATEIAVERRAVRLLFDFESHADDTVCAIARLTRGANG- 179 + RPRR+YREFVKV DLNG+ +EIA ER AVRLLFDFESHADDTVCAIARLTR +G Sbjct: 121 ALARPRRSYREFVKVTDLNGSGESEIAAERHAVRLLFDFESHADDTVCAIARLTRAGSGS 180 Query: 180 ---QFQLDSRFVPPCLTLGSHRLHLERVSRLVDILHAKSLALSARRGERIEQVAEYGVAD 236 QF++D FVPPCL LGSH LHLERV RL DILHAKSLAL ARR ERIE+VAEYGVAD Sbjct: 181 SGAQFKVDHGFVPPCLALGSHSLHLERVRRLADILHAKSLALGARRSERIERVAEYGVAD 240 Query: 237 VQLFWLLHCIHAAWPQLRLFATHPSRSPESLYVTLSQL 274 VQLFWLLHCIHAAWPQLRLFATHP R PE LY TL+QL Sbjct: 241 VQLFWLLHCIHAAWPQLRLFATHPGRPPEQLYATLAQL 278