BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2884.p (172 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EGD01690.1| hypothetical protein B1M_25327 [Burkholderia sp. ... 289 1e-76 ref|YP_002908735.1| type VI secretion protein [Burkholderia glum... 288 2e-76 ref|ZP_04947391.1| hypothetical protein BDAG_03362 [Burkholderia... 287 5e-76 ref|ZP_04942214.1| hypothetical protein BCPG_03747 [Burkholderia... 286 6e-76 ref|YP_003607785.1| type VI secretion protein, VC_A0114 family [... 261 2e-68 >gb|EGD01690.1| hypothetical protein B1M_25327 [Burkholderia sp. TJI49] Length = 454 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 139/172 (80%), Positives = 158/172 (91%) Query: 1 MTFSIQAQLTDIPSYDHVRADDVFAKLETMIRDLLDAIIPSRVISINLTRRGPTAWTGQF 60 MTFS AQLTDIP+YDH RAD+V A+LE++IRDLLDAIIPSRV+SI LTR+ PT WTGQF Sbjct: 283 MTFSTGAQLTDIPAYDHARADEVLAQLESLIRDLLDAIIPSRVVSIGLTRKTPTTWTGQF 342 Query: 61 LDDRILADSTDWYLSVNAPLPAFELTEQFPRLCKVGAPDDIEHIINSALLGIPLKLVQRV 120 LD+RI+ D+ DWYLSVNAP+PAFEL EQFPRLCKVGAPDD+EHIIN+ALLGIPLK VQRV Sbjct: 343 LDERIVEDAADWYLSVNAPMPAFELVEQFPRLCKVGAPDDVEHIINAALLGIPLKAVQRV 402 Query: 121 PSAIPVRLDNHYFALDSNSSLHAKMLAARACQIYLPASVPDASIELYAVLHS 172 P+AIPVRLDN YFALDS+S+ HAKMLAARACQIYLPAS+PDA++ELYAVL S Sbjct: 403 PAAIPVRLDNQYFALDSSSAAHAKMLAARACQIYLPASIPDAALELYAVLRS 454 >ref|YP_002908735.1| type VI secretion protein [Burkholderia glumae BGR1] gb|ACR31500.1| type VI secretion protein, VC_A0114 family [Burkholderia glumae BGR1] Length = 450 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 139/172 (80%), Positives = 156/172 (90%) Query: 1 MTFSIQAQLTDIPSYDHVRADDVFAKLETMIRDLLDAIIPSRVISINLTRRGPTAWTGQF 60 MTFS AQLTDIP+YDH RAD+VFA+LE+MIRDLLDAIIPSRV+SI LTR+ PT W+GQF Sbjct: 279 MTFSTGAQLTDIPAYDHARADEVFAQLESMIRDLLDAIIPSRVVSIGLTRKSPTTWSGQF 338 Query: 61 LDDRILADSTDWYLSVNAPLPAFELTEQFPRLCKVGAPDDIEHIINSALLGIPLKLVQRV 120 LD+RI+ D+ DWYLSVNAP+P FEL EQFPRLCK+GAPDD+E IINSALLGIPLK VQRV Sbjct: 339 LDERIVGDAADWYLSVNAPMPVFELVEQFPRLCKIGAPDDVERIINSALLGIPLKAVQRV 398 Query: 121 PSAIPVRLDNHYFALDSNSSLHAKMLAARACQIYLPASVPDASIELYAVLHS 172 P+AIPVRLDN YFALDS S+ HA+MLAARACQIYLPASVPDAS+ELYAVL S Sbjct: 399 PAAIPVRLDNQYFALDSTSAAHAEMLAARACQIYLPASVPDASLELYAVLRS 450 >ref|ZP_04947391.1| hypothetical protein BDAG_03362 [Burkholderia dolosa AUO158] gb|EAY70562.1| hypothetical protein BDAG_03362 [Burkholderia dolosa AUO158] Length = 450 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 140/172 (81%), Positives = 155/172 (90%) Query: 1 MTFSIQAQLTDIPSYDHVRADDVFAKLETMIRDLLDAIIPSRVISINLTRRGPTAWTGQF 60 MTFS +QLTDIP+YDH RAD+VFAKLE+MIRDLLDAIIPSRV+SI LTR+ PT WTGQF Sbjct: 279 MTFSTLSQLTDIPAYDHARADEVFAKLESMIRDLLDAIIPSRVVSIGLTRKTPTTWTGQF 338 Query: 61 LDDRILADSTDWYLSVNAPLPAFELTEQFPRLCKVGAPDDIEHIINSALLGIPLKLVQRV 120 LD+RI+ D+ DWYLSVNAP A EL EQFPRLCK+GAPDD+EHIINSALLGIPLK VQRV Sbjct: 339 LDERIVGDAADWYLSVNAPTSALELVEQFPRLCKIGAPDDVEHIINSALLGIPLKTVQRV 398 Query: 121 PSAIPVRLDNHYFALDSNSSLHAKMLAARACQIYLPASVPDASIELYAVLHS 172 P+AIPVRLDN YFALDS S+ HAKMLAARACQIYLPASVPDA++ELYAVL S Sbjct: 399 PAAIPVRLDNQYFALDSTSTAHAKMLAARACQIYLPASVPDAALELYAVLRS 450 >ref|ZP_04942214.1| hypothetical protein BCPG_03747 [Burkholderia cenocepacia PC184] gb|EAY65385.1| hypothetical protein BCPG_03747 [Burkholderia cenocepacia PC184] Length = 450 Score = 286 bits (733), Expect = 6e-76, Method: Composition-based stats. Identities = 139/172 (80%), Positives = 155/172 (90%) Query: 1 MTFSIQAQLTDIPSYDHVRADDVFAKLETMIRDLLDAIIPSRVISINLTRRGPTAWTGQF 60 MTFS ++LTDIP+YDH RAD+VFAKLE+MIRDLLDAIIPSRV+SI LTR+GPT WTGQF Sbjct: 279 MTFSTSSRLTDIPAYDHARADEVFAKLESMIRDLLDAIIPSRVVSIGLTRQGPTTWTGQF 338 Query: 61 LDDRILADSTDWYLSVNAPLPAFELTEQFPRLCKVGAPDDIEHIINSALLGIPLKLVQRV 120 LD RI+ D+ DWYLSVNAP+ AF L EQFPRLCK+GAPDD+EHI+NSALLGIPLK VQRV Sbjct: 339 LDTRIVDDAADWYLSVNAPMSAFTLVEQFPRLCKIGAPDDVEHIVNSALLGIPLKAVQRV 398 Query: 121 PSAIPVRLDNHYFALDSNSSLHAKMLAARACQIYLPASVPDASIELYAVLHS 172 P+AIPVRLDN YFALDSN HA+MLAARACQIYLPASVPDAS+ELYAVL S Sbjct: 399 PAAIPVRLDNQYFALDSNDPAHARMLAARACQIYLPASVPDASLELYAVLRS 450 >ref|YP_003607785.1| type VI secretion protein, VC_A0114 family [Burkholderia sp. CCGE1002] gb|ADG18274.1| type VI secretion protein, VC_A0114 family [Burkholderia sp. CCGE1002] Length = 450 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 130/170 (76%), Positives = 151/170 (88%) Query: 1 MTFSIQAQLTDIPSYDHVRADDVFAKLETMIRDLLDAIIPSRVISINLTRRGPTAWTGQF 60 MTFS +AQLTDIP+YDH RAD+VF KLE IR+LLDA+IPSRV+SI LTR+ T W GQF Sbjct: 280 MTFSTRAQLTDIPAYDHARADEVFTKLEATIRELLDAVIPSRVVSIGLTRKSATTWAGQF 339 Query: 61 LDDRILADSTDWYLSVNAPLPAFELTEQFPRLCKVGAPDDIEHIINSALLGIPLKLVQRV 120 L++RI+ + DWYLSV+AP+PAFEL EQFPRLCK+GAPDD+EHIINSALLGIPLK V RV Sbjct: 340 LEERIVEGAADWYLSVSAPMPAFELAEQFPRLCKIGAPDDVEHIINSALLGIPLKAVARV 399 Query: 121 PSAIPVRLDNHYFALDSNSSLHAKMLAARACQIYLPASVPDASIELYAVL 170 P+AIPVRLDN YFALD+ ++ HAKMLAARACQIYLPA+VPDAS+ELYAVL Sbjct: 400 PAAIPVRLDNQYFALDAANAAHAKMLAARACQIYLPATVPDASLELYAVL 449