BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2881.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02889002.1| type VI secretion system effector, Hcp1 famil...   226   1e-57
ref|ZP_02380532.1| hypothetical protein BuboB_22552 [Burkholderi...   225   2e-57
ref|YP_003607789.1| type VI secretion system effector, Hcp1 fami...   222   2e-56
gb|EGD01687.1| Hemolysin-coregulated protein [Burkholderia sp. T...   221   2e-56
ref|YP_002908738.1| type VI secretion system effector, Hcp1 fami...   221   3e-56

>ref|ZP_02889002.1| type VI secretion system effector, Hcp1 family [Burkholderia
           ambifaria IOP40-10]
 ref|ZP_02905217.1| type VI secretion system effector, Hcp1 family [Burkholderia
           ambifaria MEX-5]
 ref|YP_001810328.1| Hcp1 family type VI secretion system effector [Burkholderia
           ambifaria MC40-6]
 gb|EDT05437.1| type VI secretion system effector, Hcp1 family [Burkholderia
           ambifaria IOP40-10]
 gb|EDT43684.1| type VI secretion system effector, Hcp1 family [Burkholderia
           ambifaria MEX-5]
 gb|ACB66112.1| type VI secretion system effector, Hcp1 family [Burkholderia
           ambifaria MC40-6]
          Length = 161

 Score =  226 bits (575), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 115/125 (92%), Positives = 121/125 (96%)

Query: 1   MAIPAYAWFKDDGGADIKGSVTVQDREGSVEVVAFNHSVHIPTDGNTGKLTGTRVHAPIT 60
           MAIPAY W KDDGGADIKGSVTVQDREGSVE+VAF+H VHIPTDGNTGKLTGTRVH PIT
Sbjct: 1   MAIPAYMWLKDDGGADIKGSVTVQDREGSVELVAFDHGVHIPTDGNTGKLTGTRVHKPIT 60

Query: 61  VTKETDASTPYLYKAVTSGQTLKSVELKWYQIDDAGKEKEYFNTKLDNVKIVAVRPKMLD 120
           +TKETDASTPYLYKAVTSGQTLKSVE+KWY+IDDAGKEKEYFNTKLDNVKIVAV+PKMLD
Sbjct: 61  LTKETDASTPYLYKAVTSGQTLKSVEIKWYRIDDAGKEKEYFNTKLDNVKIVAVKPKMLD 120

Query: 121 IKNPD 125
           IKNPD
Sbjct: 121 IKNPD 125


>ref|ZP_02380532.1| hypothetical protein BuboB_22552 [Burkholderia ubonensis Bu]
 ref|ZP_04942216.1| Hemolysin-coregulated protein [Burkholderia cenocepacia PC184]
 gb|EAY65387.1| Hemolysin-coregulated protein [Burkholderia cenocepacia PC184]
          Length = 161

 Score =  225 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 115/125 (92%), Positives = 121/125 (96%)

Query: 1   MAIPAYAWFKDDGGADIKGSVTVQDREGSVEVVAFNHSVHIPTDGNTGKLTGTRVHAPIT 60
           MAIPAY W KDDGGADIKGSVTVQDREGSVE+VAF+H VHIPTDGNTGKLTGTRVH PIT
Sbjct: 1   MAIPAYMWLKDDGGADIKGSVTVQDREGSVELVAFDHGVHIPTDGNTGKLTGTRVHKPIT 60

Query: 61  VTKETDASTPYLYKAVTSGQTLKSVELKWYQIDDAGKEKEYFNTKLDNVKIVAVRPKMLD 120
           +TKETDASTPYLYKAVTSGQTLKSVE+KWY+IDDAGKEKEYFNTKLDNVKIVAV+PKMLD
Sbjct: 61  LTKETDASTPYLYKAVTSGQTLKSVEIKWYKIDDAGKEKEYFNTKLDNVKIVAVKPKMLD 120

Query: 121 IKNPD 125
           IKNPD
Sbjct: 121 IKNPD 125


>ref|YP_003607789.1| type VI secretion system effector, Hcp1 family [Burkholderia sp.
           CCGE1002]
 gb|ADG18278.1| type VI secretion system effector, Hcp1 family [Burkholderia sp.
           CCGE1002]
          Length = 161

 Score =  222 bits (565), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 111/125 (88%), Positives = 119/125 (95%)

Query: 1   MAIPAYAWFKDDGGADIKGSVTVQDREGSVEVVAFNHSVHIPTDGNTGKLTGTRVHAPIT 60
           MAIPAY W KDDGGADIKGSVTVQ REGSVE+VAF+H VHIPTDGNTGKLTGTRVH PIT
Sbjct: 1   MAIPAYMWLKDDGGADIKGSVTVQGREGSVELVAFDHGVHIPTDGNTGKLTGTRVHKPIT 60

Query: 61  VTKETDASTPYLYKAVTSGQTLKSVELKWYQIDDAGKEKEYFNTKLDNVKIVAVRPKMLD 120
           +TKETD+STPYLYKAVTSGQTLKSVE++WY+IDDAGKEKEYFNTKLDNVKIVAV+PKM D
Sbjct: 61  LTKETDSSTPYLYKAVTSGQTLKSVEIRWYKIDDAGKEKEYFNTKLDNVKIVAVKPKMFD 120

Query: 121 IKNPD 125
           IKNPD
Sbjct: 121 IKNPD 125


>gb|EGD01687.1| Hemolysin-coregulated protein [Burkholderia sp. TJI49]
          Length = 161

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 113/125 (90%), Positives = 117/125 (93%)

Query: 1   MAIPAYAWFKDDGGADIKGSVTVQDREGSVEVVAFNHSVHIPTDGNTGKLTGTRVHAPIT 60
           MAIPAY W KDDGGADIKGSVTVQ REGSVE+VAFNH VHIPTDGNTGKLTGTRVH PIT
Sbjct: 1   MAIPAYMWLKDDGGADIKGSVTVQGREGSVELVAFNHGVHIPTDGNTGKLTGTRVHKPIT 60

Query: 61  VTKETDASTPYLYKAVTSGQTLKSVELKWYQIDDAGKEKEYFNTKLDNVKIVAVRPKMLD 120
           +TKETDASTPYLYKAVTSGQTLKSVE+KWY+IDDAGKEKEYFNTKLDNVKIVAV P M D
Sbjct: 61  LTKETDASTPYLYKAVTSGQTLKSVEIKWYKIDDAGKEKEYFNTKLDNVKIVAVNPVMYD 120

Query: 121 IKNPD 125
           IKNPD
Sbjct: 121 IKNPD 125


>ref|YP_002908738.1| type VI secretion system effector, Hcp1 family [Burkholderia glumae
           BGR1]
 gb|ACR31503.1| type VI secretion system effector, Hcp1 family [Burkholderia glumae
           BGR1]
          Length = 161

 Score =  221 bits (562), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 113/125 (90%), Positives = 117/125 (93%)

Query: 1   MAIPAYAWFKDDGGADIKGSVTVQDREGSVEVVAFNHSVHIPTDGNTGKLTGTRVHAPIT 60
           MAIPAY W KDDGGADIKGSVTVQ REGSVE+VAFNH VHIPTDGNTGKLTGTRVH PIT
Sbjct: 1   MAIPAYMWLKDDGGADIKGSVTVQGREGSVELVAFNHGVHIPTDGNTGKLTGTRVHKPIT 60

Query: 61  VTKETDASTPYLYKAVTSGQTLKSVELKWYQIDDAGKEKEYFNTKLDNVKIVAVRPKMLD 120
           +TKETDASTPYLYKAVTSGQTLKSVE+KWY+IDDAGKEKEYFNTKLDNVKIVAV P M D
Sbjct: 61  LTKETDASTPYLYKAVTSGQTLKSVEIKWYKIDDAGKEKEYFNTKLDNVKIVAVNPVMYD 120

Query: 121 IKNPD 125
           IKNPD
Sbjct: 121 IKNPD 125