BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2879.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002908740.1| type VI secretion system lysozyme-like prote...   237   4e-61
ref|ZP_04947396.1| hypothetical protein BDAG_03367 [Burkholderia...   236   1e-60
ref|ZP_04942218.1| hypothetical protein BCPG_03751 [Burkholderia...   234   3e-60
ref|ZP_02889005.1| type VI secretion system lysozyme-related pro...   234   3e-60
ref|ZP_02905219.1| type VI secretion system lysozyme-related pro...   233   8e-60

>ref|YP_002908740.1| type VI secretion system lysozyme-like protein [Burkholderia glumae
           BGR1]
 gb|ACR31505.1| type VI secretion system lysozyme-like protein [Burkholderia glumae
           BGR1]
          Length = 142

 Score =  237 bits (605), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 112/136 (82%), Positives = 126/136 (92%)

Query: 3   MQAGPSLYDMLLGQIGGESLELYDDHTLACMSVQQNVQRILNTRAGALKHLPDYGLPDLT 62
           M AGPSLYDMLLGQIGGE L  YDD TL CMSVQQNVQRILNTRAG LKHLPDYGLPDLT
Sbjct: 1   MPAGPSLYDMLLGQIGGEPLAAYDDRTLECMSVQQNVQRILNTRAGTLKHLPDYGLPDLT 60

Query: 63  NIYKALPASSHVLQQQIEATLLKYEPRIRSIDINVLDNDDPGVLMCFEMTCHLKAAGLVR 122
           NIYKALPAS+H+L++Q+EATLL+YEPRIRSID+ +LDNDDPGVL+ FEM+CHLK AGLVR
Sbjct: 61  NIYKALPASAHLLKEQMEATLLRYEPRIRSIDVEILDNDDPGVLVSFEMSCHLKKAGLVR 120

Query: 123 FGTYFEPPGRLRMQRR 138
           FGTYFEPPGR+R++R+
Sbjct: 121 FGTYFEPPGRMRVKRQ 136


>ref|ZP_04947396.1| hypothetical protein BDAG_03367 [Burkholderia dolosa AUO158]
 gb|EAY70567.1| hypothetical protein BDAG_03367 [Burkholderia dolosa AUO158]
          Length = 164

 Score =  236 bits (601), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 112/142 (78%), Positives = 129/142 (90%)

Query: 3   MQAGPSLYDMLLGQIGGESLELYDDHTLACMSVQQNVQRILNTRAGALKHLPDYGLPDLT 62
           M AGPSLYDMLLGQIGGE L  YDD TL CMSVQQNVQRIL+TRAGALKHLPDYGLPDLT
Sbjct: 21  MPAGPSLYDMLLGQIGGEPLSAYDDRTLECMSVQQNVQRILSTRAGALKHLPDYGLPDLT 80

Query: 63  NIYKALPASSHVLQQQIEATLLKYEPRIRSIDINVLDNDDPGVLMCFEMTCHLKAAGLVR 122
           NIYKALPAS+H+L++Q+EATLLKYEPRIRSID+ +L+NDDPGVL+ FEMTCHLK AGLVR
Sbjct: 81  NIYKALPASAHLLKEQMEATLLKYEPRIRSIDVEILENDDPGVLVSFEMTCHLKKAGLVR 140

Query: 123 FGTYFEPPGRLRMQRRTLERDK 144
           FGTYFEPPGR+ ++R+ ++  +
Sbjct: 141 FGTYFEPPGRMHVKRQQVKSGR 162


>ref|ZP_04942218.1| hypothetical protein BCPG_03751 [Burkholderia cenocepacia PC184]
 gb|EAY65389.1| hypothetical protein BCPG_03751 [Burkholderia cenocepacia PC184]
          Length = 140

 Score =  234 bits (597), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 112/135 (82%), Positives = 123/135 (91%)

Query: 3   MQAGPSLYDMLLGQIGGESLELYDDHTLACMSVQQNVQRILNTRAGALKHLPDYGLPDLT 62
           M AGPSLYD LLGQIGGE +  YDD TL C+SVQQNV+RILNTRAGALKHLPDYGLPDLT
Sbjct: 1   MTAGPSLYDTLLGQIGGEPIGAYDDRTLECLSVQQNVRRILNTRAGALKHLPDYGLPDLT 60

Query: 63  NIYKALPASSHVLQQQIEATLLKYEPRIRSIDINVLDNDDPGVLMCFEMTCHLKAAGLVR 122
           NIYKALPASSH+L+QQ+EATLLKYEPRIRSIDI ++DN DPG+L  FEMTCHLK AGLVR
Sbjct: 61  NIYKALPASSHLLKQQMEATLLKYEPRIRSIDIGIVDNRDPGILASFEMTCHLKNAGLVR 120

Query: 123 FGTYFEPPGRLRMQR 137
           FGTYFEPPGRLR++R
Sbjct: 121 FGTYFEPPGRLRVER 135


>ref|ZP_02889005.1| type VI secretion system lysozyme-related protein [Burkholderia
           ambifaria IOP40-10]
 gb|EDT05440.1| type VI secretion system lysozyme-related protein [Burkholderia
           ambifaria IOP40-10]
          Length = 140

 Score =  234 bits (597), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 110/136 (80%), Positives = 125/136 (91%)

Query: 3   MQAGPSLYDMLLGQIGGESLELYDDHTLACMSVQQNVQRILNTRAGALKHLPDYGLPDLT 62
           M AGPSLYDMLLGQIGGE +  YDD TL C+SVQQNV+RILNTRAGALKHLPDYGLPDLT
Sbjct: 1   MTAGPSLYDMLLGQIGGEPIGAYDDRTLECLSVQQNVRRILNTRAGALKHLPDYGLPDLT 60

Query: 63  NIYKALPASSHVLQQQIEATLLKYEPRIRSIDINVLDNDDPGVLMCFEMTCHLKAAGLVR 122
           NIYKALPAS+H+L+QQ+EATLLKYEPRIRSI++ ++DN DPG+L+ FEMTCHLK  GLVR
Sbjct: 61  NIYKALPASAHLLKQQMEATLLKYEPRIRSIEVGIVDNRDPGILVSFEMTCHLKNTGLVR 120

Query: 123 FGTYFEPPGRLRMQRR 138
           FGTYFEPPGRLR++RR
Sbjct: 121 FGTYFEPPGRLRVERR 136


>ref|ZP_02905219.1| type VI secretion system lysozyme-related protein [Burkholderia
           ambifaria MEX-5]
 gb|EDT43686.1| type VI secretion system lysozyme-related protein [Burkholderia
           ambifaria MEX-5]
          Length = 140

 Score =  233 bits (594), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 109/136 (80%), Positives = 125/136 (91%)

Query: 3   MQAGPSLYDMLLGQIGGESLELYDDHTLACMSVQQNVQRILNTRAGALKHLPDYGLPDLT 62
           M AGPSLYD+LLGQIGGE +  YDD TL C+SVQQNV+RILNTRAGALKHLPDYGLPDLT
Sbjct: 1   MTAGPSLYDILLGQIGGEPIGAYDDRTLECLSVQQNVRRILNTRAGALKHLPDYGLPDLT 60

Query: 63  NIYKALPASSHVLQQQIEATLLKYEPRIRSIDINVLDNDDPGVLMCFEMTCHLKAAGLVR 122
           NIYKALPAS+H+L+QQ+EATLLKYEPRIRSI++ ++DN DPG+L+ FEMTCHLK  GLVR
Sbjct: 61  NIYKALPASAHLLKQQMEATLLKYEPRIRSIEVGIVDNRDPGILVSFEMTCHLKNTGLVR 120

Query: 123 FGTYFEPPGRLRMQRR 138
           FGTYFEPPGRLR++RR
Sbjct: 121 FGTYFEPPGRLRIERR 136