BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2876.p (265 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774910.1| nitrate/sulfonate/bicarbonate ABC transporte... 482 e-134 ref|YP_004405276.1| ABC transporter ATPase [Verrucosispora maris... 327 9e-88 ref|ZP_08152795.1| nitrate ABC superfamily ATP binding cassette ... 314 8e-84 ref|YP_004008977.1| ABC transporter ATPase [Rhodococcus equi 103... 313 2e-83 ref|ZP_07300018.1| putative nitrate ABC transporter, ATP-binding... 300 1e-79 >ref|YP_003774910.1| nitrate/sulfonate/bicarbonate ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63002.1| ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats. Identities = 249/265 (93%), Positives = 259/265 (97%) Query: 1 MGHGSSVSIKRVGLTIGKNEIMAGIDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQDVAG 60 M HGSSVS+KRVGLTIG N+IMAGIDLDIRAGEF+CLLGPSGCGKSTLLNAIAGFQDV+G Sbjct: 1 MAHGSSVSLKRVGLTIGSNDIMAGIDLDIRAGEFVCLLGPSGCGKSTLLNAIAGFQDVSG 60 Query: 61 EISVAGKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGIPAAERRSAAERYVSL 120 EISV GKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRG+ +AERR+AAERYVSL Sbjct: 61 EISVDGKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGVASAERRAAAERYVSL 120 Query: 121 VGLKHAIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIW 180 VGLKHAIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIW Sbjct: 121 VGLKHAIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIW 180 Query: 181 KSTGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKAIEEVDLPHPRDPADPACMALYAR 240 KSTGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIK IEEV LPHPRDPADPACMALYAR Sbjct: 181 KSTGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKTIEEVHLPHPRDPADPACMALYAR 240 Query: 241 IRDDIGAEVTRVLRAQGLIEEESIQ 265 IRDDIGAEVTRVLRAQGL+EEES++ Sbjct: 241 IRDDIGAEVTRVLRAQGLLEEESVK 265 >ref|YP_004405276.1| ABC transporter ATPase [Verrucosispora maris AB-18-032] gb|AEB44676.1| abc transporter atpase subunit [Verrucosispora maris AB-18-032] Length = 294 Score = 327 bits (839), Expect = 9e-88, Method: Composition-based stats. Identities = 165/256 (64%), Positives = 202/256 (78%), Gaps = 1/256 (0%) Query: 4 GSSVSIKRVGLTIGKNEIMAGIDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQDVAG-EI 62 G+ VS++ V + G + + G LDI AGEF+CLLGPSGCGKSTLLNA+AGF AG E+ Sbjct: 22 GAPVSLRDVDIRFGDFDAVRGATLDIAAGEFVCLLGPSGCGKSTLLNAVAGFVTPAGGEV 81 Query: 63 SVAGKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGIPAAERRSAAERYVSLVG 122 + V GP + RGVVFQS+EALFPWLSVR+NV +G ++R +P A+R + +RY+++VG Sbjct: 82 TCGNAPVTGPDVSRGVVFQSAEALFPWLSVRQNVSFGPRMRRMPKAQRAAVEDRYLAMVG 141 Query: 123 LKHAIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIWKS 182 L H+ DKFP++LSGGMRQRAQ+ARVL NEPSVVLMDEPFGALDAQTR V+Q ELDRIW+ Sbjct: 142 LSHSADKFPSQLSGGMRQRAQLARVLANEPSVVLMDEPFGALDAQTRLVMQVELDRIWRD 201 Query: 183 TGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKAIEEVDLPHPRDPADPACMALYARIR 242 TG TI+FVTHDI EAILL+DR+VTMTAGP A IK + DLP PRD DPA AL+ ++R Sbjct: 202 TGATILFVTHDIGEAILLSDRIVTMTAGPAAAIKNVYPCDLPRPRDLTDPASAALFRQLR 261 Query: 243 DDIGAEVTRVLRAQGL 258 +DIG EV R LRAQGL Sbjct: 262 EDIGEEVARTLRAQGL 277 >ref|ZP_08152795.1| nitrate ABC superfamily ATP binding cassette transporter, ABC protein [Rhodococcus equi ATCC 33707] gb|EGD26022.1| nitrate ABC superfamily ATP binding cassette transporter, ABC protein [Rhodococcus equi ATCC 33707] Length = 269 Score = 314 bits (805), Expect = 8e-84, Method: Composition-based stats. Identities = 158/260 (60%), Positives = 199/260 (76%), Gaps = 1/260 (0%) Query: 4 GSSVSIKRVGLTIGKNEIMAGIDLDIRAGEFICLLGPSGCGKSTLLNAIAGF-QDVAGEI 62 G + ++ +G++ G EI++GI LD+R GEF+CLLGPSGCGKSTLL+A+AGF + AGEI Sbjct: 9 GVPIDVRDLGISFGAAEIVSGIGLDVRPGEFVCLLGPSGCGKSTLLSAMAGFVKPSAGEI 68 Query: 63 SVAGKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGIPAAERRSAAERYVSLVG 122 G V G G+VFQSSEALF W++V +NV YG ++ G A + A Y+++VG Sbjct: 69 VCDGDEVYGSNPHAGMVFQSSEALFEWMTVSQNVAYGPRMHGADKAAQARIAAEYLAMVG 128 Query: 123 LKHAIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIWKS 182 L HA DKFPA+LSGGMRQR QIARVL N+PS+VLMDEPFGALDAQTR+VLQ+ELD+IW+ Sbjct: 129 LPHAGDKFPAQLSGGMRQRVQIARVLANQPSLVLMDEPFGALDAQTRQVLQTELDKIWRH 188 Query: 183 TGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKAIEEVDLPHPRDPADPACMALYARIR 242 TGCT+VFVTHDI EA+ LADRVV M+AGP+A IK+I EVD P PRD A P + LY ++R Sbjct: 189 TGCTVVFVTHDIDEALTLADRVVVMSAGPKARIKSIYEVDAPRPRDRAHPEVIDLYEQLR 248 Query: 243 DDIGAEVTRVLRAQGLIEEE 262 DDI AEV LR QG+ E++ Sbjct: 249 DDIRAEVVASLRNQGIEEDQ 268 >ref|YP_004008977.1| ABC transporter ATPase [Rhodococcus equi 103S] emb|CBH50299.1| putative ABC transporter ATPase subunit [Rhodococcus equi 103S] Length = 269 Score = 313 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 157/260 (60%), Positives = 198/260 (76%), Gaps = 1/260 (0%) Query: 4 GSSVSIKRVGLTIGKNEIMAGIDLDIRAGEFICLLGPSGCGKSTLLNAIAGF-QDVAGEI 62 G + ++ +G++ G EI++GI LD+R GEF+CLLGPSGCGKSTLL+A+AGF + AGEI Sbjct: 9 GVPIDVRDLGISFGAAEIVSGIGLDVRPGEFVCLLGPSGCGKSTLLSAMAGFVKPSAGEI 68 Query: 63 SVAGKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGIPAAERRSAAERYVSLVG 122 G V G G+VFQSSEALF W++V +NV YG ++ G + A Y+++VG Sbjct: 69 VCDGDEVYGSNPHAGMVFQSSEALFEWMTVSQNVAYGPRMHGADKGAQARIAAEYLAMVG 128 Query: 123 LKHAIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIWKS 182 L HA DKFPA+LSGGMRQR QIARVL N+PS+VLMDEPFGALDAQTR+VLQ+ELD+IW+ Sbjct: 129 LPHAGDKFPAQLSGGMRQRVQIARVLANQPSLVLMDEPFGALDAQTRQVLQTELDKIWRH 188 Query: 183 TGCTIVFVTHDIWEAILLADRVVTMTAGPRAHIKAIEEVDLPHPRDPADPACMALYARIR 242 TGCT+VFVTHDI EA+ LADRVV M+AGP+A IK+I EVD P PRD A P + LY ++R Sbjct: 189 TGCTVVFVTHDIDEALTLADRVVVMSAGPKARIKSIYEVDAPRPRDRAHPEVIDLYEQLR 248 Query: 243 DDIGAEVTRVLRAQGLIEEE 262 DDI AEV LR QG+ E++ Sbjct: 249 DDIRAEVVASLRNQGIEEDQ 268 >ref|ZP_07300018.1| putative nitrate ABC transporter, ATP-binding protein [Streptomyces hygroscopicus ATCC 53653] gb|EFL28387.1| putative nitrate ABC transporter, ATP-binding protein [Streptomyces himastatinicus ATCC 53653] Length = 265 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 155/253 (61%), Positives = 191/253 (75%), Gaps = 1/253 (0%) Query: 7 VSIKRVGLTIGKNEIMAGIDLDIRAGEFICLLGPSGCGKSTLLNAIAGFQDVA-GEISVA 65 +S VG+ G E + I LDI AGEF+CLLGPSGCGKSTLL+A+AGF VA G ++V Sbjct: 1 MSATGVGIRFGSFEAVRDISLDIAAGEFLCLLGPSGCGKSTLLSAMAGFVPVAAGGLTVD 60 Query: 66 GKRVKGPGLDRGVVFQSSEALFPWLSVRENVEYGLKLRGIPAAERRSAAERYVSLVGLKH 125 G + GP D G+VFQSSEALF W++VR+NV +G ++RG AER A+ Y+ LVGL+H Sbjct: 61 GAPISGPDPDLGMVFQSSEALFDWMTVRQNVAFGPRMRGRSRAERAELADTYLGLVGLRH 120 Query: 126 AIDKFPAELSGGMRQRAQIARVLVNEPSVVLMDEPFGALDAQTREVLQSELDRIWKSTGC 185 D+FP +LSGGMRQR QIARVL NEP VVLMDEPFGALDAQTR+V+Q E+ RIW+++GC Sbjct: 121 CADRFPGQLSGGMRQRVQIARVLANEPRVVLMDEPFGALDAQTRQVMQDEMGRIWRASGC 180 Query: 186 TIVFVTHDIWEAILLADRVVTMTAGPRAHIKAIEEVDLPHPRDPADPACMALYARIRDDI 245 T+VFVTHDI EAILLADR+ MTAGP A +K + V+LP PRD DPA + L +R+DI Sbjct: 181 TVVFVTHDIDEAILLADRIAVMTAGPAASVKDVYPVELPRPRDETDPAAVELRRALREDI 240 Query: 246 GAEVTRVLRAQGL 258 G EV + LR QGL Sbjct: 241 GEEVRKALRDQGL 253