BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2866.p (241 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774899.1| NAD-dependent formate dehydrogenase beta sub... 469 e-130 ref|YP_004847354.1| formate dehydrogenase subunit beta [Pseudogu... 415 e-114 ref|ZP_03698685.1| NADH dehydrogenase (quinone) [Lutiella nitrof... 412 e-113 ref|YP_001101655.1| NAD dependent formate dehydrogenase subunit ... 407 e-111 ref|YP_001355343.1| NAD-dependent formate dehydrogenase beta sub... 405 e-111 >ref|YP_003774899.1| NAD-dependent formate dehydrogenase beta subunit [Herbaspirillum seropedicae SmR1] gb|ADJ62991.1| NAD-dependent formate dehydrogenase beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 520 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 234/241 (97%), Positives = 238/241 (98%) Query: 1 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKNYGVGRSH 60 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKN+GVGRSH Sbjct: 280 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKNFGVGRSH 339 Query: 61 GTLPFQLAGNIKQGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLPPSQF 120 GTLPFQLAGNI+QGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLP SQF Sbjct: 340 GTLPFQLAGNIRQGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLPQSQF 399 Query: 121 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV 180 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV Sbjct: 400 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV 459 Query: 181 EVIDKIIANEERPQQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFGAPGEQA 240 EVIDKIIAN++R QQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFGAP EQA Sbjct: 460 EVIDKIIANDDRAQQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFGAPSEQA 519 Query: 241 A 241 A Sbjct: 520 A 520 >ref|YP_004847354.1| formate dehydrogenase subunit beta [Pseudogulbenkiania sp. NH8B] dbj|BAK76940.1| formate dehydrogenase, beta subunit [Pseudogulbenkiania sp. NH8B] Length = 514 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 201/235 (85%), Positives = 222/235 (94%) Query: 1 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKNYGVGRSH 60 MLESLEGKRGVVRAKPPLPA+ GLFG+PTVINN+ISLASVPVILARGA FY +YG+GRS Sbjct: 275 MLESLEGKRGVVRAKPPLPALSGLFGQPTVINNVISLASVPVILARGAAFYADYGMGRSK 334 Query: 61 GTLPFQLAGNIKQGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLPPSQF 120 GTLPFQLAGN+K GGLVEKAFGLTLR+LL DFGGGSASGRPIRAVQ+GGPLGAYLP SQF Sbjct: 335 GTLPFQLAGNLKYGGLVEKAFGLTLRELLHDFGGGSASGRPIRAVQVGGPLGAYLPESQF 394 Query: 121 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV 180 DTPLDYEAFAA+GA++GHGG+VAFDDSVDMA QARYAM+FCA+ESCGKCTPCRIGSTRGV Sbjct: 395 DTPLDYEAFAALGAVVGHGGIVAFDDSVDMAEQARYAMEFCAIESCGKCTPCRIGSTRGV 454 Query: 181 EVIDKIIANEERPQQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFGA 235 EVI +I +E+RPQQI LL+ LCDTM++GSLCAMGGMTP+PVLSALNHFPEDFGA Sbjct: 455 EVIQRIQKDEKRPQQIALLRDLCDTMLHGSLCAMGGMTPYPVLSALNHFPEDFGA 509 >ref|ZP_03698685.1| NADH dehydrogenase (quinone) [Lutiella nitroferrum 2002] gb|EEG08679.1| NADH dehydrogenase (quinone) [Lutiella nitroferrum 2002] Length = 514 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 199/235 (84%), Positives = 221/235 (94%) Query: 1 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKNYGVGRSH 60 MLESLEGKRGVVRAKPPLPA+ GLFG+PTVINN+ISLASVPVILARGA FY +YG+GRS Sbjct: 275 MLESLEGKRGVVRAKPPLPALSGLFGQPTVINNVISLASVPVILARGAAFYADYGMGRSK 334 Query: 61 GTLPFQLAGNIKQGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLPPSQF 120 GTLPFQLAGN+K GGLVEKAFGLTLR+LL DFGGGSASGRPIRAVQ+GGPLGAYLP SQF Sbjct: 335 GTLPFQLAGNLKYGGLVEKAFGLTLRELLHDFGGGSASGRPIRAVQVGGPLGAYLPESQF 394 Query: 121 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV 180 DTPLDYEAFAA+GA++GHGG+VAFDD+VDM QARYAM+FCA+ESCGKCTPCRIGSTRGV Sbjct: 395 DTPLDYEAFAALGAVVGHGGIVAFDDTVDMVEQARYAMEFCAIESCGKCTPCRIGSTRGV 454 Query: 181 EVIDKIIANEERPQQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFGA 235 EVI +I +E+RPQQI LL+ LCDTM++GSLCAMGGMTP+PVLSALNHFPEDFGA Sbjct: 455 EVIQRIQKDEKRPQQIALLRDLCDTMLHGSLCAMGGMTPYPVLSALNHFPEDFGA 509 >ref|YP_001101655.1| NAD dependent formate dehydrogenase subunit beta: fdsB [Herminiimonas arsenicoxydans] emb|CAL63534.1| NAD-dependent formate dehydrogenase beta subunit [Herminiimonas arsenicoxydans] Length = 525 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 192/234 (82%), Positives = 217/234 (92%) Query: 1 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKNYGVGRSH 60 MLES+EGKRG+VRAKPPLPA++GLFGKPTVINN+ISL++VP+IL+RGA FYK++G+GRS Sbjct: 284 MLESIEGKRGLVRAKPPLPALQGLFGKPTVINNVISLSAVPLILSRGATFYKDFGMGRSR 343 Query: 61 GTLPFQLAGNIKQGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLPPSQF 120 GTLP QLAGN+K GGLVEKAFG+TLR+LL DFGGGS SGRPIRAVQ+GGPLGAY+P S F Sbjct: 344 GTLPMQLAGNLKYGGLVEKAFGVTLRELLYDFGGGSESGRPIRAVQVGGPLGAYMPESLF 403 Query: 121 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV 180 DTP DYEAFAA+ + +GHGGLVAFDD+VDMA+QARYAM FCAVESCGKCTPCRIGSTRGV Sbjct: 404 DTPFDYEAFAAVASTVGHGGLVAFDDTVDMAKQARYAMHFCAVESCGKCTPCRIGSTRGV 463 Query: 181 EVIDKIIANEERPQQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFG 234 EV+DKIIAN+ RPQQIHLL+ LCD MV GSLCAMG MTPFPVLSALNHFPEDFG Sbjct: 464 EVMDKIIANQNRPQQIHLLRDLCDVMVTGSLCAMGNMTPFPVLSALNHFPEDFG 517 >ref|YP_001355343.1| NAD-dependent formate dehydrogenase beta subunit [Janthinobacterium sp. Marseille] gb|ABR89660.1| NAD-dependent formate dehydrogenase beta subunit [Janthinobacterium sp. Marseille] Length = 518 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 192/234 (82%), Positives = 217/234 (92%) Query: 1 MLESLEGKRGVVRAKPPLPAIEGLFGKPTVINNLISLASVPVILARGADFYKNYGVGRSH 60 MLES+EGKRG+VRAKPPLPA++GLFG+PTVINN+ISL++VP+IL+RGA+FYKNYG+GRS Sbjct: 276 MLESIEGKRGMVRAKPPLPALQGLFGQPTVINNVISLSAVPLILSRGAEFYKNYGMGRSR 335 Query: 61 GTLPFQLAGNIKQGGLVEKAFGLTLRQLLEDFGGGSASGRPIRAVQMGGPLGAYLPPSQF 120 GTLP QLAGN+K GGLVEKAFG+TLR+LL DFGGGS SGRPIRAVQ+GGPLGAY+P S F Sbjct: 336 GTLPMQLAGNLKYGGLVEKAFGVTLRELLYDFGGGSESGRPIRAVQVGGPLGAYMPESLF 395 Query: 121 DTPLDYEAFAAIGAMIGHGGLVAFDDSVDMARQARYAMQFCAVESCGKCTPCRIGSTRGV 180 DTP DYEAFAA+ + +GHGGLVAFDD+VDMA+QARYAM FCA ESCGKCTPCRIGSTRGV Sbjct: 396 DTPFDYEAFAAVASTVGHGGLVAFDDTVDMAKQARYAMHFCAEESCGKCTPCRIGSTRGV 455 Query: 181 EVIDKIIANEERPQQIHLLKSLCDTMVNGSLCAMGGMTPFPVLSALNHFPEDFG 234 EV+DKIIAN+ RPQQIHLL+ LCD MV GSLCAMG MTPFPVLSALNHFPEDFG Sbjct: 456 EVMDKIIANQNRPQQIHLLRDLCDVMVTGSLCAMGNMTPFPVLSALNHFPEDFG 509