BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2859.p (312 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774893.1| aldose 1-epimerase [Herbaspirillum seropedic... 569 e-160 ref|YP_002801938.1| aldose 1-epimerase family protein [Azotobact... 331 8e-89 ref|YP_001185594.1| aldose 1-epimerase [Pseudomonas mendocina ym... 309 3e-82 ref|YP_004476357.1| Aldose 1-epimerase [Pseudomonas fulva 12-X] ... 303 3e-80 ref|YP_001174571.1| aldose 1-epimerase family protein [Pseudomon... 302 6e-80 >ref|YP_003774893.1| aldose 1-epimerase [Herbaspirillum seropedicae SmR1] gb|ADJ62985.1| aldose 1-epimerase protein [Herbaspirillum seropedicae SmR1] Length = 312 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 286/312 (91%), Positives = 302/312 (96%) Query: 1 MSLIDEQEVPPDLPHIQRIEVNQLQCLRVQTERAELLIAEQGAQVLRYQVHGQEPVIWMS 60 MSLIDEQEVPPDLPHIQRIEVNQLQCLRVQT RAELLIAEQGAQVLRYQ HGQEP+IWMS Sbjct: 1 MSLIDEQEVPPDLPHIQRIEVNQLQCLRVQTARAELLIAEQGAQVLRYQEHGQEPLIWMS 60 Query: 61 EEAAFEAGNSVRGGIPVCWPWFGDLMRNPPQVQALHAGGRLPAHGLVRGIDWLLMENAIE 120 EEAAFEAGNSVRGGIPVCWPWFGDLMRNPPQVQ+LH+GGRLPAHGLVRGI WLLMENAIE Sbjct: 61 EEAAFEAGNSVRGGIPVCWPWFGDLMRNPPQVQSLHSGGRLPAHGLVRGIPWLLMENAIE 120 Query: 121 GNTVRLVLAIPPTTESPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQHIALTQALHS 180 G++VRLVLAIPPT+ESPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQH+ALTQALHS Sbjct: 121 GDSVRLVLAIPPTSESPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQHLALTQALHS 180 Query: 181 YFAVSSIHNVTVDGLEGQRYIETLEGWAEREQKRPLVVSSETDRIYLDLPPHLAIRDEGW 240 YFAVSSIH+VT++GLEG RYIETLEGWAEREQKR LVVSSETDRIYLDLPP L+IRD+GW Sbjct: 181 YFAVSSIHDVTIEGLEGHRYIETLEGWAEREQKRALVVSSETDRIYLDLPPRLSIRDDGW 240 Query: 241 NRRIHIEASGSTSAVVWNPWVSKARRLSQFADDAWQRMLCIETANVMDDLVELEPGAEHT 300 NRRI IEASGSTSAVVWNPWVSKARRLSQFADDAWQRMLC+ETANVM+DLVELEPGAEHT Sbjct: 241 NRRIQIEASGSTSAVVWNPWVSKARRLSQFADDAWQRMLCVETANVMEDLVELEPGAEHT 300 Query: 301 MGVSLWGETLGG 312 +GV+LW E GG Sbjct: 301 LGVTLWSEKAGG 312 >ref|YP_002801938.1| aldose 1-epimerase family protein [Azotobacter vinelandii DJ] gb|ACO80963.1| Aldose 1-epimerase family protein [Azotobacter vinelandii DJ] Length = 304 Score = 331 bits (849), Expect = 8e-89, Method: Composition-based stats. Identities = 174/302 (57%), Positives = 210/302 (69%), Gaps = 2/302 (0%) Query: 10 PPDLPHIQRIEVNQLQCLRVQTERAELLIAEQGAQVLRYQVHGQEPVIWMSEEAAFEAGN 69 P P ++RIE+ +L C R++T AELL+AEQGAQVL YQ HG++P+IW+SE+A F G Sbjct: 4 PFTAPQVERIEMGELPCWRIKTAAAELLVAEQGAQVLSYQRHGEQPLIWLSEQAEFRRGL 63 Query: 70 SVRGGIPVCWPWFGDLMRNPPQVQALHAG-GRLPAHGLVRGIDWLLMENAIEGNTVRLVL 128 SVRGG+PVCWPWFGDL RNP V+A+ G PAHG VRG DW L + A E V L Sbjct: 64 SVRGGVPVCWPWFGDLARNPAGVRAMREDHGPAPAHGEVRGRDWRLQDIAKENGAVTLTF 123 Query: 129 AIPPTTESPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQHIALTQALHSYFAVSSIH 188 +P + S L P ++L L I LD+RL L LTTRN S +AL+QALH+Y AV I Sbjct: 124 DLPQSA-SGELPGWPHALDLTLAIRLDERLDLSLTTRNRSSYRVALSQALHTYLAVGDIR 182 Query: 189 NVTVDGLEGQRYIETLEGWAEREQKRPLVVSSETDRIYLDLPPHLAIRDEGWNRRIHIEA 248 V ++GL+G RYIETLE W ER Q+ L + ETDRIYLD PP L + D W RRI +EA Sbjct: 183 EVGIEGLDGLRYIETLEDWDERHQRGILNFAGETDRIYLDTPPRLDLVDASWKRRICLEA 242 Query: 249 SGSTSAVVWNPWVSKARRLSQFADDAWQRMLCIETANVMDDLVELEPGAEHTMGVSLWGE 308 SGS SA+VWNPW+ KA RLSQFADDAWQRMLCIETANV+DD VEL P T+ + LW E Sbjct: 243 SGSHSAIVWNPWIDKAARLSQFADDAWQRMLCIETANVLDDAVELAPEQSATLALCLWSE 302 Query: 309 TL 310 L Sbjct: 303 PL 304 >ref|YP_001185594.1| aldose 1-epimerase [Pseudomonas mendocina ymp] gb|ABP82862.1| Aldose 1-epimerase [Pseudomonas mendocina ymp] Length = 300 Score = 309 bits (792), Expect = 3e-82, Method: Composition-based stats. Identities = 156/297 (52%), Positives = 205/297 (69%), Gaps = 2/297 (0%) Query: 15 HIQRIEVNQLQCLRVQTERAELLIAEQGAQVLRYQVHGQEPVIWMSEEAAFEAGNSVRGG 74 ++R+E++QL C R++T+R+ELL+A+QGAQ+L YQ GQ P+IW+S EAA++ SVRGG Sbjct: 5 QVERVELDQLICWRIRTQRSELLVAQQGAQILAYQRDGQPPLIWLSPEAAYQRAQSVRGG 64 Query: 75 IPVCWPWFGDLMRNPPQVQALHAGGRLPAHGLVRGIDWLLMENAIEGNTVRLVLAIPPTT 134 +P+CWPWFGDL RNP VQA + PAHGLVRG+DW L+ EG V L A T Sbjct: 65 VPICWPWFGDLRRNPQAVQAHYQQVEAPAHGLVRGLDWQLLGIDEEGEQVTLRFAF--DT 122 Query: 135 ESPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQHIALTQALHSYFAVSSIHNVTVDG 194 + L P L+ EI L D L + L T N E + L+QALH+YFAVS + V+VDG Sbjct: 123 QREPLAGWPHAALLQFEIRLADDLAMSLQTHNRGEAPLTLSQALHTYFAVSDVRQVSVDG 182 Query: 195 LEGQRYIETLEGWAEREQKRPLVVSSETDRIYLDLPPHLAIRDEGWNRRIHIEASGSTSA 254 L+G RY++TL+ W E Q L ETDRIY+D P L+I D GW RRIH++ SGS SA Sbjct: 183 LQGCRYVDTLQDWRELRQDAELRFVGETDRIYMDTPARLSIVDPGWGRRIHLDCSGSRSA 242 Query: 255 VVWNPWVSKARRLSQFADDAWQRMLCIETANVMDDLVELEPGAEHTMGVSLWGETLG 311 V+WNPWV KARRLSQF DDAWQ MLCIETAN+++D+V+++P H + + L ++ G Sbjct: 243 VLWNPWVDKARRLSQFPDDAWQNMLCIETANLLEDVVQVKPDEWHRLDLRLSSDSFG 299 >ref|YP_004476357.1| Aldose 1-epimerase [Pseudomonas fulva 12-X] gb|AEF24263.1| Aldose 1-epimerase [Pseudomonas fulva 12-X] Length = 298 Score = 303 bits (775), Expect = 3e-80, Method: Composition-based stats. Identities = 157/295 (53%), Positives = 200/295 (67%), Gaps = 3/295 (1%) Query: 17 QRIEVNQLQCLRVQTERAELLIAEQGAQVLRYQVHGQEPVIWMSEEAAFEAGNSVRGGIP 76 +RI++ L C R+Q AEL+++EQGAQ+LRYQ EP+IW+S+EAA++ G SVRGG+P Sbjct: 6 ERIQLGDLACWRIQHAGAELVVSEQGAQILRYQPAQGEPLIWLSDEAAYKTGKSVRGGVP 65 Query: 77 VCWPWFGDLMRNPPQVQALHA-GGRLPAHGLVRGIDWLLMENAIEGNTVRLVLAIPPTTE 135 VCWPWFGDL RNP ++A HA PAHGLVR DW L+ E + V L E Sbjct: 66 VCWPWFGDLQRNPEAIRASHARPADSPAHGLVRDRDWQLIGLNTEEDGVTLSFTFDTAAE 125 Query: 136 SPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQHIALTQALHSYFAVSSIHNVTVDGL 195 A P EL+L+I L +RL L LTTRN + + ++QALH+YFAVS I V ++GL Sbjct: 126 PIA--EWPHAAELQLDIHLGERLKLSLTTRNLGDSELPISQALHTYFAVSDIRQVRIEGL 183 Query: 196 EGQRYIETLEGWAEREQKRPLVVSSETDRIYLDLPPHLAIRDEGWNRRIHIEASGSTSAV 255 EG Y++TL+ W Q + S ETDRIYLD PP L+I D W RRI + + GS SAV Sbjct: 184 EGCGYVDTLQDWKTVRQDGAVTFSGETDRIYLDTPPQLSIVDPIWKRRILMRSQGSASAV 243 Query: 256 VWNPWVSKARRLSQFADDAWQRMLCIETANVMDDLVELEPGAEHTMGVSLWGETL 310 VWNPW+ KA+RLSQFADDAWQ MLCIE ANV+DD + L PGAE+ + V+LW + L Sbjct: 244 VWNPWIDKAKRLSQFADDAWQGMLCIEHANVLDDSLILAPGAEYRLDVTLWAQPL 298 >ref|YP_001174571.1| aldose 1-epimerase family protein [Pseudomonas stutzeri A1501] gb|ABP81729.1| aldose 1-epimerase family protein [Pseudomonas stutzeri A1501] Length = 300 Score = 302 bits (773), Expect = 6e-80, Method: Composition-based stats. Identities = 163/292 (55%), Positives = 199/292 (68%), Gaps = 4/292 (1%) Query: 16 IQRIEVNQLQCLRVQTERAELLIAEQGAQVLRYQVHGQEPVIWMSEEAAFEAGNSVRGGI 75 IQRIE+NQL C RV+ ELLIAEQGAQ+L Y+ P+IW+SE+AAFE G SVRGG+ Sbjct: 5 IQRIEMNQLACWRVRRGEDELLIAEQGAQILSYRQGDAPPIIWLSEDAAFEQGQSVRGGV 64 Query: 76 PVCWPWFGDLMRNPPQVQALHAGGR-LPAHGLVRGIDWLLMENAIEGNTVRLVLAIPPTT 134 PVCWPWFGDL RNP +VQA + G + P HGLVR + W L E EG+T L P Sbjct: 65 PVCWPWFGDLARNPQEVQASYHGEQPAPFHGLVRALPWQLREQRGEGDTAILEFHCPQAL 124 Query: 135 ESPALRHLPPGIELRLEILLDDRLHLKLTTRNGSEQHIALTQALHSYFAVSSIHNVTVDG 194 AL P +EL L+I L D L L L++RN S Q + ++QALHSYFAV IH V V+G Sbjct: 125 G--ALPGWPHRVELTLQIRLADELELSLSSRNVSTQAVTISQALHSYFAVGDIHQVRVEG 182 Query: 195 LEGQRYIETLEGWAEREQKR-PLVVSSETDRIYLDLPPHLAIRDEGWNRRIHIEASGSTS 253 L G YI+TL W +R+Q+ L + ETDRIYL LP L + D W R I + GS S Sbjct: 183 LAGCPYIDTLLDWQQRQQQNGDLAFNGETDRIYLQLPTTLRLVDPAWKRSIQLTTRGSRS 242 Query: 254 AVVWNPWVSKARRLSQFADDAWQRMLCIETANVMDDLVELEPGAEHTMGVSL 305 AV+WNPW+ KA+RLS FADDAWQRM CIETANV+DD V L+PG +H +GVS+ Sbjct: 243 AVLWNPWIDKAKRLSSFADDAWQRMACIETANVLDDAVVLQPGQQHLLGVSV 294