BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2858.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774892.1| tartrate dehydrogenase [Herbaspirillum serop... 719 0.0 ref|YP_935362.1| tartrate dehydrogenase [Azoarcus sp. BH72] >gi|... 632 e-179 dbj|BAD81015.1| tartrate dehydrogenase [uncultured bacterium] 615 e-174 ref|YP_001352927.1| tartrate dehydrogenase [Janthinobacterium sp... 606 e-171 ref|YP_001861001.1| tartrate dehydrogenase [Burkholderia phymatu... 600 e-169 >ref|YP_003774892.1| tartrate dehydrogenase [Herbaspirillum seropedicae SmR1] emb|CAM32565.1| Tartrate dehydrogenase protein [Herbaspirillum seropedicae] gb|ADJ62984.1| tartrate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 359 Score = 719 bits (1857), Expect = 0.0, Method: Composition-based stats. Identities = 341/359 (94%), Positives = 355/359 (98%) Query: 30 MSKTHKIAVIAGDGIGQEVMPEGLRAVEAAARKFGINIEFSHFDWAHCGYYAQHGKMMPD 89 MSKTH+IAVIAGDGIGQEVMPEGLRAV+AA++KFGI+IEF+HFDWAHC YYA+HGKMMPD Sbjct: 1 MSKTHRIAVIAGDGIGQEVMPEGLRAVQAASKKFGIDIEFTHFDWAHCNYYAEHGKMMPD 60 Query: 90 DWFDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA 149 DWF+QLKGFEAI+FGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA Sbjct: 61 DWFEQLKGFEAIYFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA 120 Query: 150 NRKPGDIDFYVVRENTEGEYSAIGGRMFEGTERETVIQESVFSRKGTDRILKFAFDLAQS 209 NRKPGDIDFYVVRENTEGEYS+IGGRM+EGTERETVIQESVFSRKGTDRILKFAFDLAQS Sbjct: 121 NRKPGDIDFYVVRENTEGEYSSIGGRMYEGTERETVIQESVFSRKGTDRILKFAFDLAQS 180 Query: 210 RPKKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVV 269 RPKKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVV Sbjct: 181 RPKKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVV 240 Query: 270 VASNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVAT 329 VASNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVA Sbjct: 241 VASNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVAM 300 Query: 330 IWSGAMMLDFLGNGEGKYRQAHDAMLAAIEEVLVNGPTTPDLGGKSNTTEVGKAIAAAI 388 IWSGAMMLDFLG+G+GKYRQAHDAMLAAIE VLVNGPTTPDLGGKSNT EVG+AIAAAI Sbjct: 301 IWSGAMMLDFLGDGQGKYRQAHDAMLAAIETVLVNGPTTPDLGGKSNTAEVGQAIAAAI 359 >ref|YP_935362.1| tartrate dehydrogenase [Azoarcus sp. BH72] emb|CAL96476.1| tartrate dehydrogenase [Azoarcus sp. BH72] Length = 359 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 293/359 (81%), Positives = 328/359 (91%) Query: 30 MSKTHKIAVIAGDGIGQEVMPEGLRAVEAAARKFGINIEFSHFDWAHCGYYAQHGKMMPD 89 M+ H+IAVIAGDGIGQEVMPEGLRAV+AAA KF I +EF+HFDWAHC YY QHGKMMPD Sbjct: 1 MTTPHRIAVIAGDGIGQEVMPEGLRAVQAAAAKFDIALEFTHFDWAHCDYYLQHGKMMPD 60 Query: 90 DWFDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLA 149 DWF+QLKGF+AIFFGAVGWP VPDH+SLWGSLLKFRRDFD YVNLRPVRLMPGVPCPLA Sbjct: 61 DWFEQLKGFDAIFFGAVGWPDKVPDHISLWGSLLKFRRDFDQYVNLRPVRLMPGVPCPLA 120 Query: 150 NRKPGDIDFYVVRENTEGEYSAIGGRMFEGTERETVIQESVFSRKGTDRILKFAFDLAQS 209 N+K GDIDFYVVRENTEGEYS++GG+M+EGTERETV+QES+F+RKG DRILK+AF+LAQ Sbjct: 121 NKKVGDIDFYVVRENTEGEYSSVGGKMYEGTERETVLQESIFTRKGVDRILKYAFELAQK 180 Query: 210 RPKKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVV 269 RPKKHLTSATKSNGIAI+MPYWD RV+ MG YP+V+ D+YHIDILTA FVL+P+RFDVV Sbjct: 181 RPKKHLTSATKSNGIAISMPYWDGRVKEMGKAYPEVKWDQYHIDILTARFVLSPERFDVV 240 Query: 270 VASNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVAT 329 VASNLFGDILSDLGPACAGTIGIAPSAN+NP R PSLFEPVHGSAPDI+G+NIANPVA Sbjct: 241 VASNLFGDILSDLGPACAGTIGIAPSANLNPDRTFPSLFEPVHGSAPDIYGRNIANPVAM 300 Query: 330 IWSGAMMLDFLGNGEGKYRQAHDAMLAAIEEVLVNGPTTPDLGGKSNTTEVGKAIAAAI 388 IWSGAMMLDFLGNG+ +Y AHDA++ AIE VLV GP TPD+GG +NTTEVGKA+AAAI Sbjct: 301 IWSGAMMLDFLGNGDARYTAAHDAIVKAIETVLVEGPRTPDMGGTANTTEVGKAVAAAI 359 >dbj|BAD81015.1| tartrate dehydrogenase [uncultured bacterium] Length = 361 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 283/355 (79%), Positives = 323/355 (90%) Query: 34 HKIAVIAGDGIGQEVMPEGLRAVEAAARKFGINIEFSHFDWAHCGYYAQHGKMMPDDWFD 93 H+IAVIAGDGIGQEVMPEGLR ++AA R+FG+++EF FDWAHC YY QHG+MMPDDWF Sbjct: 3 HRIAVIAGDGIGQEVMPEGLRVLDAACRQFGLDLEFVSFDWAHCDYYLQHGQMMPDDWFA 62 Query: 94 QLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLANRKP 153 QLK F+AI+FGAVGWPATVPD++SLWGSLLKFRR+FD Y N+RPVRLMPG+PCPLA ++ Sbjct: 63 QLKDFDAIYFGAVGWPATVPDYISLWGSLLKFRREFDQYANVRPVRLMPGIPCPLAGKQV 122 Query: 154 GDIDFYVVRENTEGEYSAIGGRMFEGTERETVIQESVFSRKGTDRILKFAFDLAQSRPKK 213 GDIDFYV+RENTEGEYSA+GGRMFEGTERETVIQES+F+R+GTDRILKFAFDLAQ RPKK Sbjct: 123 GDIDFYVIRENTEGEYSAVGGRMFEGTERETVIQESIFTRQGTDRILKFAFDLAQRRPKK 182 Query: 214 HLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVVVASN 273 HLTSATKSNGIAI+MPYWDERVEAM YP+VR DKYHIDILTA FVL+P+RFDVVVASN Sbjct: 183 HLTSATKSNGIAISMPYWDERVEAMAGHYPEVRWDKYHIDILTARFVLSPERFDVVVASN 242 Query: 274 LFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVATIWSG 333 LFGDILSDLGPAC GTIGIAPSAN+NP R PSLFEPVHGSAPDI G+ IANPVA IWSG Sbjct: 243 LFGDILSDLGPACTGTIGIAPSANLNPDRTFPSLFEPVHGSAPDIAGQGIANPVAMIWSG 302 Query: 334 AMMLDFLGNGEGKYRQAHDAMLAAIEEVLVNGPTTPDLGGKSNTTEVGKAIAAAI 388 AMMLDFLG G+ +Y+ AHDA++AAIE+VLV GP TPD+GG ++T E+G+AIAAA+ Sbjct: 303 AMMLDFLGQGDSRYQAAHDAIMAAIEQVLVGGPRTPDMGGTASTVELGRAIAAAL 357 >ref|YP_001352927.1| tartrate dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR88259.1| tartrate dehydrogenase [Janthinobacterium sp. Marseille] Length = 358 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 284/357 (79%), Positives = 314/357 (87%) Query: 32 KTHKIAVIAGDGIGQEVMPEGLRAVEAAARKFGINIEFSHFDWAHCGYYAQHGKMMPDDW 91 KTHKIAVIAGDGIG EVMPEGLR +EAAARKF + +EF+ +WA+C YY +HG+MMPDDW Sbjct: 2 KTHKIAVIAGDGIGNEVMPEGLRVLEAAARKFNLALEFTTMEWANCEYYLKHGQMMPDDW 61 Query: 92 FDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLANR 151 QL+GFEAI+FGA G PA VPDH+SLWGSL+KFRRDFD YVNLRPVRLMPGVPCPLANR Sbjct: 62 RQQLEGFEAIYFGAAGMPALVPDHISLWGSLIKFRRDFDQYVNLRPVRLMPGVPCPLANR 121 Query: 152 KPGDIDFYVVRENTEGEYSAIGGRMFEGTERETVIQESVFSRKGTDRILKFAFDLAQSRP 211 KPGDIDFYVVRENTEGEYSA+GG+ FEGTE E V Q ++FSR GTDRILK+AF+LAQSRP Sbjct: 122 KPGDIDFYVVRENTEGEYSAVGGKSFEGTEYEFVSQNAIFSRHGTDRILKYAFELAQSRP 181 Query: 212 KKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVVVA 271 KKHLTSATKSNGI+I+MPYWD RVEAM Y DV DKYHIDIL A FVL+P+RFDVVVA Sbjct: 182 KKHLTSATKSNGISISMPYWDSRVEAMAPSYADVHWDKYHIDILCARFVLSPERFDVVVA 241 Query: 272 SNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVATIW 331 SNLFGDILSDLGPAC GTIGIAPSAN+NP R+ PSLFEPVHGSAPDIFGKNIANP+ IW Sbjct: 242 SNLFGDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVHGSAPDIFGKNIANPIGMIW 301 Query: 332 SGAMMLDFLGNGEGKYRQAHDAMLAAIEEVLVNGPTTPDLGGKSNTTEVGKAIAAAI 388 SGAMMLDFLGNG+ Y+ AHDA++ AIE VLV GP TPDLGG NTT+VGKAIAAAI Sbjct: 302 SGAMMLDFLGNGDANYKAAHDAIMQAIETVLVQGPNTPDLGGSGNTTDVGKAIAAAI 358 >ref|YP_001861001.1| tartrate dehydrogenase [Burkholderia phymatum STM815] gb|ACC73955.1| tartrate dehydrogenase [Burkholderia phymatum STM815] Length = 359 Score = 600 bits (1546), Expect = e-169, Method: Composition-based stats. Identities = 273/353 (77%), Positives = 313/353 (88%) Query: 32 KTHKIAVIAGDGIGQEVMPEGLRAVEAAARKFGINIEFSHFDWAHCGYYAQHGKMMPDDW 91 KTHKIAVIAGDGIG+EVMPEGLR V AAA K+GIN+EF F+WA C YYA+HG+MMP DW Sbjct: 2 KTHKIAVIAGDGIGKEVMPEGLRVVSAAASKYGINLEFQTFEWADCDYYAKHGEMMPADW 61 Query: 92 FDQLKGFEAIFFGAVGWPATVPDHVSLWGSLLKFRRDFDLYVNLRPVRLMPGVPCPLANR 151 F+QL+ FEAI+FGAVG P VPDH+SLWGSLLKFRR+FD YVNLRPVRLMPGVPCPLA + Sbjct: 62 FEQLQQFEAIYFGAVGMPDIVPDHISLWGSLLKFRREFDQYVNLRPVRLMPGVPCPLAGK 121 Query: 152 KPGDIDFYVVRENTEGEYSAIGGRMFEGTERETVIQESVFSRKGTDRILKFAFDLAQSRP 211 P DIDFYVVRENTEGEYS++GGR+FEGTERE V+QESVFSR G DRIL++AF+LA +RP Sbjct: 122 SPSDIDFYVVRENTEGEYSSVGGRLFEGTEREVVLQESVFSRHGVDRILRYAFELANNRP 181 Query: 212 KKHLTSATKSNGIAITMPYWDERVEAMGAKYPDVRRDKYHIDILTAHFVLNPDRFDVVVA 271 KKHLT+ATKSNGI+I+MPYWDERV +G +YP+V+ DKYHIDIL A FVL+P+RFDVVVA Sbjct: 182 KKHLTAATKSNGISISMPYWDERVANIGTEYPEVKWDKYHIDILCARFVLSPERFDVVVA 241 Query: 272 SNLFGDILSDLGPACAGTIGIAPSANINPTRELPSLFEPVHGSAPDIFGKNIANPVATIW 331 SNLFGDILSDLGPACAGTIGIAPSAN+NP R+ PSLFEPVHGSAPDI+GKNIANP+ IW Sbjct: 242 SNLFGDILSDLGPACAGTIGIAPSANLNPERKFPSLFEPVHGSAPDIYGKNIANPLGMIW 301 Query: 332 SGAMMLDFLGNGEGKYRQAHDAMLAAIEEVLVNGPTTPDLGGKSNTTEVGKAI 384 SGAMMLDFLG G+ KYR AHD+++ AIEE L GP TPDLGG +NTTEVG+ + Sbjct: 302 SGAMMLDFLGQGDSKYRSAHDSIVKAIEECLTEGPRTPDLGGSANTTEVGQGV 354