BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2852.p (191 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAQ18656.1| methyl-accepting chemotaxis transducer protein [... 166 1e-39 ref|ZP_00945262.1| Probable transmembrane methyl-accepting chemo... 164 9e-39 ref|YP_003746077.1| methyl-accepting chemotaxis transducer trans... 163 1e-38 ref|YP_002259896.1| methyl-accepting chemotaxis transducer prote... 163 1e-38 ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer ... 162 2e-38 >emb|CAQ18656.1| methyl-accepting chemotaxis transducer protein [Ralstonia solanacearum MolK2] Length = 744 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 117/164 (71%), Positives = 138/164 (84%), Gaps = 1/164 (0%) Query: 1 MIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAREIKALIDDSVA 60 +IDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AA+EIKALIDDSV Sbjct: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVT 423 Query: 61 QVDAGGRLVEQAGSTMENVVISVQRVSHIVGEISDATQEQRTGIEQVNQAIVHMDETTQQ 120 VDAG LVE+AG+TM +V SV+RV+ IVGEI+ A+QEQR+GIE+V+ A+ +D+ TQQ Sbjct: 424 NVDAGSTLVEEAGTTMREIVASVRRVTDIVGEITAASQEQRSGIEEVSHAVTQLDDATQQ 483 Query: 121 NAALVEQAAAAAQSLQQQSQRLRELVGVFRL-PLLPTEEAAQAV 163 NAALVEQAAAAAQSLQ+Q+ L ++V FRL P +PT A + V Sbjct: 484 NAALVEQAAAAAQSLQEQADSLTQVVAQFRLDPTMPTVPAVRHV 527 >ref|ZP_00945262.1| Probable transmembrane methyl-accepting chemotaxis protein [Ralstonia solanacearum UW551] gb|EAP72229.1| Probable transmembrane methyl-accepting chemotaxis protein [Ralstonia solanacearum UW551] Length = 644 Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats. Identities = 117/164 (71%), Positives = 138/164 (84%), Gaps = 1/164 (0%) Query: 1 MIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAREIKALIDDSVA 60 +IDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AA+EIKALIDDSV Sbjct: 376 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVT 435 Query: 61 QVDAGGRLVEQAGSTMENVVISVQRVSHIVGEISDATQEQRTGIEQVNQAIVHMDETTQQ 120 VDAG LVE+AG+TM +V SV+RV+ IVGEI+ A+QEQR+GIE+V+ A+ +D+ TQQ Sbjct: 436 NVDAGSTLVEEAGTTMREIVASVRRVTDIVGEITAASQEQRSGIEEVSHAVTQLDDATQQ 495 Query: 121 NAALVEQAAAAAQSLQQQSQRLRELVGVFRL-PLLPTEEAAQAV 163 NAALVEQAAAAAQSLQ+Q+ L ++V FRL P +PT A + V Sbjct: 496 NAALVEQAAAAAQSLQEQADSLTQVVAQFRLDPTMPTVPAVRHV 539 >ref|YP_003746077.1| methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum CFBP2957] emb|CBJ43470.1| methyl-accepting chemotaxis transducer transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 624 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 117/164 (71%), Positives = 137/164 (83%), Gaps = 1/164 (0%) Query: 1 MIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAREIKALIDDSVA 60 +IDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AA+EIKALIDDSV Sbjct: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVT 423 Query: 61 QVDAGGRLVEQAGSTMENVVISVQRVSHIVGEISDATQEQRTGIEQVNQAIVHMDETTQQ 120 VDAG LVE+AG+TM +V SV+RV+ IVGEI+ A+QEQR+GIE+V+ A+ +D+ TQQ Sbjct: 424 NVDAGSTLVEEAGTTMREIVASVRRVTDIVGEITAASQEQRSGIEEVSHAVTQLDDATQQ 483 Query: 121 NAALVEQAAAAAQSLQQQSQRLRELVGVFRL-PLLPTEEAAQAV 163 NAALVEQAAAAAQSLQ+Q+ L ++V FRL P PT A + V Sbjct: 484 NAALVEQAAAAAQSLQEQADSLTQVVAQFRLDPTAPTVPAVRHV 527 >ref|YP_002259896.1| methyl-accepting chemotaxis transducer protein [Ralstonia solanacearum IPO1609] emb|CAQ61829.1| methyl-accepting chemotaxis transducer protein [Ralstonia solanacearum IPO1609] Length = 632 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 117/164 (71%), Positives = 138/164 (84%), Gaps = 1/164 (0%) Query: 1 MIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAREIKALIDDSVA 60 +IDGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA AA+EIKALIDDSV Sbjct: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIDDSVT 423 Query: 61 QVDAGGRLVEQAGSTMENVVISVQRVSHIVGEISDATQEQRTGIEQVNQAIVHMDETTQQ 120 VDAG LVE+AG+TM +V SV+RV+ IVGEI+ A+QEQR+GIE+V+ A+ +D+ TQQ Sbjct: 424 NVDAGSTLVEEAGTTMREIVASVRRVTDIVGEITAASQEQRSGIEEVSHAVTQLDDATQQ 483 Query: 121 NAALVEQAAAAAQSLQQQSQRLRELVGVFRL-PLLPTEEAAQAV 163 NAALVEQAAAAAQSLQ+Q+ L ++V FRL P +PT A + V Sbjct: 484 NAALVEQAAAAAQSLQEQADSLTQVVAQFRLDPTMPTVPAVRHV 527 >ref|YP_546262.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] gb|ABE50421.1| methyl-accepting chemotaxis sensory transducer [Methylobacillus flagellatus KT] Length = 569 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 121/170 (71%), Positives = 137/170 (80%) Query: 1 MIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAREIKALIDDSVA 60 +IDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA AA+EIK LI DSV Sbjct: 364 VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSANAAKEIKGLITDSVE 423 Query: 61 QVDAGGRLVEQAGSTMENVVISVQRVSHIVGEISDATQEQRTGIEQVNQAIVHMDETTQQ 120 VDAG RLVEQAG+TM++VV SVQRV+ IV EIS A+ EQ TGIEQVNQAIV MDE TQQ Sbjct: 424 SVDAGSRLVEQAGTTMKHVVDSVQRVTDIVSEISAASHEQSTGIEQVNQAIVQMDEVTQQ 483 Query: 121 NAALVEQAAAAAQSLQQQSQRLRELVGVFRLPLLPTEEAAQAVELAGAVA 170 NAALVE+AAAA+QSLQ Q+ L + V VF++ + + A V VA Sbjct: 484 NAALVEEAAAASQSLQDQAASLAQAVSVFKVNGMQVQAAVHKVSKPKPVA 533