BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2844.p (384 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004155880.1| fumarate reductase/succinate dehydrogenase f... 540 e-151 ref|YP_002945046.1| FAD-binding monooxygenase [Variovorax parado... 535 e-150 ref|ZP_07042742.1| monooxygenase, FAD-binding protein [Comamonas... 504 e-141 ref|YP_003277641.1| monooxygenase, FAD-binding protein [Comamona... 504 e-140 ref|YP_004489172.1| Salicylate 1-monooxygenase [Delftia sp. Cs1-... 502 e-140 >ref|YP_004155880.1| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein [Variovorax paradoxus EPS] gb|ADU37769.1| fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Variovorax paradoxus EPS] Length = 385 Score = 540 bits (1391), Expect = e-151, Method: Composition-based stats. Identities = 275/369 (74%), Positives = 315/369 (85%), Gaps = 1/369 (0%) Query: 15 LTAAIALQRAGHEVVVYEQSRQFLRVGADINLTPNAVRALDGLGIGEAVRRTAARPTHRI 74 L AAIAL+RAGH+VVV+EQ++QF RVGADINLTPNAVRALDGLG+GEA R TAARP+HRI Sbjct: 18 LVAAIALRRAGHDVVVFEQAKQFARVGADINLTPNAVRALDGLGVGEAARVTAARPSHRI 77 Query: 75 SRTWNSGEETSRLTMGDTAEQKYGAPQLTIHRADLLAALAEVFPLEQVRFAKRAEAIREE 134 SRT+++GEETSRL M D+AE++YGAPQLTIHRADLLAALA++FP E+V KRAE I + Sbjct: 78 SRTYDTGEETSRLEMADSAEERYGAPQLTIHRADLLAALADMFPAERVALGKRAEKIAAD 137 Query: 135 GDGIDLHFTDGSTDRVDALIGGDGIHSAVRTAMFGAESPRFTGVVAFRAVVPAAKVAGVP 194 G+ L FTDG++ RV L+G DGIHS VRTAMFGAESPRFTG+VA+RAVVPA +VAGVP Sbjct: 138 EAGVTLSFTDGTSARVGVLLGADGIHSCVRTAMFGAESPRFTGIVAYRAVVPAERVAGVP 197 Query: 195 NLQAFTKWWGPNPESQIVTFPLNRGEDIFIFATTAQESWHLESWTTPGNVQELRDSYAGF 254 NL AFTKWWGPNP+SQIVTFPLNRG+DIFIFATT Q++WHLESWT PG+V ELR+ Y + Sbjct: 198 NLGAFTKWWGPNPQSQIVTFPLNRGKDIFIFATTPQDTWHLESWTAPGSVDELREQYVAY 257 Query: 255 HPDAMALLDACDEVLKTALYERDPLPAWARGNMALLGDACHPMMPFMAQGAGMAIEDAVV 314 HP+A ALLDACD VLKTALYERDP+PAWA G MALLGDA HPM+PFMAQGAGMAIEDAVV Sbjct: 258 HPEARALLDACDTVLKTALYERDPMPAWAEGRMALLGDAAHPMLPFMAQGAGMAIEDAVV 317 Query: 315 LARCLATVSALGDVAAALHRYEQLRMERASTIQIGSRGNNWLRAGGNADWVYGYDAWQVP 374 L+R L VS + D A AL YE+ R+ RAS +Q+GSRGNNWLR GGNADWVYGYDAW VP Sbjct: 318 LSRHLEGVS-MSDAAEALKSYEKARIARASQVQLGSRGNNWLREGGNADWVYGYDAWAVP 376 Query: 375 LQPQVAAVA 383 L AA A Sbjct: 377 LGEPTAATA 385 >ref|YP_002945046.1| FAD-binding monooxygenase [Variovorax paradoxus S110] gb|ACS19780.1| monooxygenase FAD-binding [Variovorax paradoxus S110] Length = 387 Score = 535 bits (1379), Expect = e-150, Method: Composition-based stats. Identities = 270/361 (74%), Positives = 310/361 (85%), Gaps = 1/361 (0%) Query: 15 LTAAIALQRAGHEVVVYEQSRQFLRVGADINLTPNAVRALDGLGIGEAVRRTAARPTHRI 74 L AAIAL+RAGH+V V+EQ++QF RVGADINLTPNAVRALDGLG+GEA R TAARP+HRI Sbjct: 18 LVAAIALRRAGHDVAVFEQAKQFARVGADINLTPNAVRALDGLGVGEAARITAARPSHRI 77 Query: 75 SRTWNSGEETSRLTMGDTAEQKYGAPQLTIHRADLLAALAEVFPLEQVRFAKRAEAIREE 134 SRT+++GEETSRL M D+AEQ+YGAPQLTIHRADLLAALA++FP E V KRA+ I + Sbjct: 78 SRTYDTGEETSRLEMADSAEQRYGAPQLTIHRADLLAALADMFPAECVALGKRAQTIAAD 137 Query: 135 GDGIDLHFTDGSTDRVDALIGGDGIHSAVRTAMFGAESPRFTGVVAFRAVVPAAKVAGVP 194 G+ L F+DG+ RV AL+G DGIHS VRTAMFGAESPRFTG+VA+RAVVPA +VAGVP Sbjct: 138 EKGVSLSFSDGTGARVGALLGADGIHSCVRTAMFGAESPRFTGIVAYRAVVPAERVAGVP 197 Query: 195 NLQAFTKWWGPNPESQIVTFPLNRGEDIFIFATTAQESWHLESWTTPGNVQELRDSYAGF 254 NL AFTKWWGPNP+SQIVTFPLNRG DIFIFATT Q++WHLESWT PG+V ELR+ Y + Sbjct: 198 NLGAFTKWWGPNPQSQIVTFPLNRGRDIFIFATTPQDTWHLESWTAPGSVDELREQYVAY 257 Query: 255 HPDAMALLDACDEVLKTALYERDPLPAWARGNMALLGDACHPMMPFMAQGAGMAIEDAVV 314 HP+A ALLDACD VLKTALYERDP+PAWA G MALLGDA HPM+PFMAQGAGMAIEDAVV Sbjct: 258 HPEARALLDACDTVLKTALYERDPMPAWAAGRMALLGDAAHPMLPFMAQGAGMAIEDAVV 317 Query: 315 LARCLATVSALGDVAAALHRYEQLRMERASTIQIGSRGNNWLRAGGNADWVYGYDAWQVP 374 L+R L + A+ DV +AL Y+ R+ERAS +Q+GSRGNNWLR GGNADWVYGYDAW VP Sbjct: 318 LSRHLEGI-AMADVPSALQAYQTARIERASQVQLGSRGNNWLREGGNADWVYGYDAWAVP 376 Query: 375 L 375 L Sbjct: 377 L 377 >ref|ZP_07042742.1| monooxygenase, FAD-binding protein [Comamonas testosteroni S44] gb|EFI63599.1| monooxygenase, FAD-binding protein [Comamonas testosteroni S44] Length = 390 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 272/372 (73%), Positives = 305/372 (81%), Gaps = 3/372 (0%) Query: 15 LTAAIALQRAGHEVVVYEQSRQFLRVGADINLTPNAVRALDGLG--IGEAVRRTAARPTH 72 L AA AL R+GHEV V+EQSRQ+LRVGADINLTPNAVRALDGLG I AVR +AARPTH Sbjct: 18 LAAANALHRSGHEVTVFEQSRQYLRVGADINLTPNAVRALDGLGDAIAAAVRASAARPTH 77 Query: 73 RISRTWNSGEETSRLTMGDTAEQKYGAPQLTIHRADLLAALAEVFPLEQVRFAKRAEAIR 132 RISRTW++GEETSRLTMG+ AE++YGAPQLTIHRADLLAALA+ FP EQV+FAKR I Sbjct: 78 RISRTWDNGEETSRLTMGNEAERQYGAPQLTIHRADLLAALADAFPHEQVKFAKRVNRIV 137 Query: 133 EEGDGIDLHFTDGS-TDRVDALIGGDGIHSAVRTAMFGAESPRFTGVVAFRAVVPAAKVA 191 + G+ + F+DG+ D +DALIG DGIHS VRT++FGAESPRFTGVVAFR VVP +V Sbjct: 138 QTDAGVAVEFSDGARVDGLDALIGSDGIHSVVRTSLFGAESPRFTGVVAFRTVVPTERVR 197 Query: 192 GVPNLQAFTKWWGPNPESQIVTFPLNRGEDIFIFATTAQESWHLESWTTPGNVQELRDSY 251 VP++ AFTKWWGP P+SQIVTFPLN+G D FIFATTAQESWH ESWTT G+V ELR Y Sbjct: 198 HVPDIGAFTKWWGPTPDSQIVTFPLNQGRDTFIFATTAQESWHEESWTTEGSVTELRSFY 257 Query: 252 AGFHPDAMALLDACDEVLKTALYERDPLPAWARGNMALLGDACHPMMPFMAQGAGMAIED 311 AGFHP A ALLDACD VLKTALYERDPLP W++G ++LLGDA HPMMPFMAQGAGMAIED Sbjct: 258 AGFHPHARALLDACDSVLKTALYERDPLPHWSQGRVSLLGDASHPMMPFMAQGAGMAIED 317 Query: 312 AVVLARCLATVSALGDVAAALHRYEQLRMERASTIQIGSRGNNWLRAGGNADWVYGYDAW 371 AVVLAR L V VA AL YE +R +R S IQIGSRGNNWLRAGGNADWVYGYDAW Sbjct: 318 AVVLARNLDAVQDAEGVAQALQNYEAMRKQRTSQIQIGSRGNNWLRAGGNADWVYGYDAW 377 Query: 372 QVPLQPQVAAVA 383 QV L + A + Sbjct: 378 QVALTAEPVACS 389 >ref|YP_003277641.1| monooxygenase, FAD-binding protein [Comamonas testosteroni CNB-2] gb|ACY32345.1| monooxygenase, FAD-binding protein [Comamonas testosteroni CNB-2] Length = 390 Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 271/372 (72%), Positives = 304/372 (81%), Gaps = 3/372 (0%) Query: 15 LTAAIALQRAGHEVVVYEQSRQFLRVGADINLTPNAVRALDGLG--IGEAVRRTAARPTH 72 L AA AL R+GHEV V+EQSRQ+LRVGADINLTPNAVRALDGLG I AVR +AARPTH Sbjct: 18 LAAANALHRSGHEVTVFEQSRQYLRVGADINLTPNAVRALDGLGDGIAAAVRASAARPTH 77 Query: 73 RISRTWNSGEETSRLTMGDTAEQKYGAPQLTIHRADLLAALAEVFPLEQVRFAKRAEAIR 132 RISRTW++GEETSRLTMG+ AE++YGAPQLTIHRADLLAALA+ FP EQV+FAKR I Sbjct: 78 RISRTWDNGEETSRLTMGNEAERQYGAPQLTIHRADLLAALADAFPHEQVKFAKRVNRIV 137 Query: 133 EEGDGIDLHFTDGS-TDRVDALIGGDGIHSAVRTAMFGAESPRFTGVVAFRAVVPAAKVA 191 + G+ + F+DG+ D +DALIG DGIHS VRT++FGAESPRFTGVVAFR VVP +V Sbjct: 138 QTDAGVAVEFSDGARVDGLDALIGSDGIHSVVRTSLFGAESPRFTGVVAFRTVVPTERVR 197 Query: 192 GVPNLQAFTKWWGPNPESQIVTFPLNRGEDIFIFATTAQESWHLESWTTPGNVQELRDSY 251 +P++ AFTKWWGP P+SQIVTFPLN+G D FIFATTAQ SWH ESWTT G+V ELR Y Sbjct: 198 HIPDIGAFTKWWGPTPDSQIVTFPLNQGRDTFIFATTAQASWHEESWTTEGSVAELRGFY 257 Query: 252 AGFHPDAMALLDACDEVLKTALYERDPLPAWARGNMALLGDACHPMMPFMAQGAGMAIED 311 AGFHP A ALLDACD VLKTALYERDPLP W +G ++LLGDACHPMMPFMAQGAGMAIED Sbjct: 258 AGFHPHARALLDACDSVLKTALYERDPLPHWLQGRVSLLGDACHPMMPFMAQGAGMAIED 317 Query: 312 AVVLARCLATVSALGDVAAALHRYEQLRMERASTIQIGSRGNNWLRAGGNADWVYGYDAW 371 AVVLAR L V VA AL YE +R +R S IQIGSRGNNWLRAGGNADWVYGYDAW Sbjct: 318 AVVLARNLDAVQDAEGVAQALQNYEAMRKQRTSQIQIGSRGNNWLRAGGNADWVYGYDAW 377 Query: 372 QVPLQPQVAAVA 383 QV L + A + Sbjct: 378 QVALTAEPVACS 389 >ref|YP_004489172.1| Salicylate 1-monooxygenase [Delftia sp. Cs1-4] gb|AEF90817.1| Salicylate 1-monooxygenase [Delftia sp. Cs1-4] Length = 381 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 271/359 (75%), Positives = 300/359 (83%), Gaps = 3/359 (0%) Query: 21 LQRAGHEVVVYEQSRQFLRVGADINLTPNAVRALDGLG--IGEAVRRTAARPTHRISRTW 78 L +AGHEV+V+EQSRQFLRVGADINLTPNAVRALDGLG I AVR +AARPTHRISR W Sbjct: 22 LHQAGHEVLVFEQSRQFLRVGADINLTPNAVRALDGLGADIAAAVRASAARPTHRISRNW 81 Query: 79 NSGEETSRLTMGDTAEQKYGAPQLTIHRADLLAALAEVFPLEQVRFAKRAEAIREEGDGI 138 ++GEETSRLTMGD AE+KYGAPQLTIHRADLLAALA+ FPL+QV+ KRA I + G G+ Sbjct: 82 DTGEETSRLTMGDEAERKYGAPQLTIHRADLLAALADAFPLDQVQLGKRASQITQTGQGV 141 Query: 139 DLHFTDGS-TDRVDALIGGDGIHSAVRTAMFGAESPRFTGVVAFRAVVPAAKVAGVPNLQ 197 D+ FTDGS R+DALIG DGIHS VR A+FGAESPRFTGVVAFRAVVP +V VP++Q Sbjct: 142 DIAFTDGSEVARLDALIGADGIHSVVRAALFGAESPRFTGVVAFRAVVPTERVRHVPDIQ 201 Query: 198 AFTKWWGPNPESQIVTFPLNRGEDIFIFATTAQESWHLESWTTPGNVQELRDSYAGFHPD 257 AFTKWWG P+SQIVTFPLN+G D FIFATTAQ+SWH ESWTTPG+V+ELR YA FHPD Sbjct: 202 AFTKWWGATPQSQIVTFPLNQGRDTFIFATTAQDSWHEESWTTPGSVEELRGFYADFHPD 261 Query: 258 AMALLDACDEVLKTALYERDPLPAWARGNMALLGDACHPMMPFMAQGAGMAIEDAVVLAR 317 A ALLDACD VLKTALYERDPLPAW++ + LLGDACHPMMPFMAQGAGMAIEDAVVLAR Sbjct: 262 ARALLDACDGVLKTALYERDPLPAWSQDRITLLGDACHPMMPFMAQGAGMAIEDAVVLAR 321 Query: 318 CLATVSALGDVAAALHRYEQLRMERASTIQIGSRGNNWLRAGGNADWVYGYDAWQVPLQ 376 L V L RY+ +RM+R S IQIGSRGNNWLRAGGNAD VYGYDAW V LQ Sbjct: 322 NLDAAPGPQQVPEVLARYQAMRMQRTSEIQIGSRGNNWLRAGGNADGVYGYDAWAVALQ 380