BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2839.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_297776.1| short chain dehydrogenase [Ralstonia eutropha J... 361 6e-98 ref|YP_002007251.1| short chain dehydrogenase [Cupriavidus taiwa... 355 4e-96 ref|YP_001893022.1| short-chain dehydrogenase/reductase SDR [Ral... 348 6e-94 ref|ZP_07674480.1| oxidoreductase, short chain dehydrogenase/red... 342 3e-92 ref|YP_004680886.1| 3-oxoacyl-[acyl-carrier-protein] reductase F... 342 6e-92 >ref|YP_297776.1| short chain dehydrogenase [Ralstonia eutropha JMP134] gb|AAZ62932.1| Short-chain dehydrogenase/reductase SDR [Ralstonia eutropha JMP134] Length = 267 Score = 361 bits (927), Expect = 6e-98, Method: Composition-based stats. Identities = 205/274 (74%), Positives = 225/274 (82%), Gaps = 7/274 (2%) Query: 17 MAMTSLQGKVAVVTGGSSGIGLATVELLLEAGAAVAFCGRDGERLQHAEAALRERYPAAR 76 M+M L GKVAVVTGGSSGIGLATVELLLEAGAAVA CGRD RL+ AEA LR+R+P R Sbjct: 1 MSMIELDGKVAVVTGGSSGIGLATVELLLEAGAAVAMCGRDESRLRSAEAQLRQRFPNCR 60 Query: 77 LYSAPCDVLVQEQVRAFAASVENTLGPVSMLVNNAGQGRVSTFADTPDEAWSEELHLKFF 136 LY+A CDVL EQV AFAA+V++TLG V MLVNNAGQGRVSTFA+T D AW EEL LKFF Sbjct: 61 LYAATCDVLKPEQVAAFAANVQSTLGNVDMLVNNAGQGRVSTFANTEDAAWMEELQLKFF 120 Query: 137 SVIYPTRAFLPQLQAMSAQHGDAAIVCVNSLLATQPEPHMVATSAARAGVHNLVRSLATE 196 SVI+PTRAFLPQL+ Q G AIVCVNSLLA QPEPHMVATSAARAGV NLVRS+ATE Sbjct: 121 SVIHPTRAFLPQLE----QSGQGAIVCVNSLLAQQPEPHMVATSAARAGVLNLVRSMATE 176 Query: 197 LACGEAARVRVNGILIGLVESGQWRRRYAARGPELQDQSWARWTAALAARKQIQLGRLGL 256 A VRVNGILIGLVESGQWRRR+ AR E ++ WA WTA LA +K I LGRLGL Sbjct: 177 FA---PKGVRVNGILIGLVESGQWRRRFDARPEEDRNLDWAAWTARLAQQKHIPLGRLGL 233 Query: 257 PREAAQAIVFLATPLSSYTTGSHIDVSGGLSRHA 290 P EAA+AI+FLA+PLSSYTTGSHID+SGG SRHA Sbjct: 234 PVEAARAILFLASPLSSYTTGSHIDISGGHSRHA 267 >ref|YP_002007251.1| short chain dehydrogenase [Cupriavidus taiwanensis LMG 19424] emb|CAQ71190.1| putative Short-chain dehydrogenase/reductase (SDR) [Cupriavidus taiwanensis LMG 19424] Length = 270 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 203/274 (74%), Positives = 221/274 (80%), Gaps = 7/274 (2%) Query: 17 MAMTSLQGKVAVVTGGSSGIGLATVELLLEAGAAVAFCGRDGERLQHAEAALRERYPAAR 76 M+M L GKVAVVTGGSSGIGLATVELLLEAGAAVA CGRD RL+ AEA LRE++P R Sbjct: 4 MSMIELGGKVAVVTGGSSGIGLATVELLLEAGAAVAMCGRDEARLRGAEAQLREKFPGCR 63 Query: 77 LYSAPCDVLVQEQVRAFAASVENTLGPVSMLVNNAGQGRVSTFADTPDEAWSEELHLKFF 136 LY+A CDVL EQV AFAA V+ LG V MLVNNAGQGRVSTFA+T D AW +EL LKFF Sbjct: 64 LYAATCDVLRPEQVAAFAADVQQKLGNVDMLVNNAGQGRVSTFANTEDAAWMDELQLKFF 123 Query: 137 SVIYPTRAFLPQLQAMSAQHGDAAIVCVNSLLATQPEPHMVATSAARAGVHNLVRSLATE 196 SVI+PTRAFLPQL+ Q G AIVCVNSLLA QPEPHMVATSAARAGV NLVRS+ATE Sbjct: 124 SVIHPTRAFLPQLE----QSGQGAIVCVNSLLAQQPEPHMVATSAARAGVLNLVRSMATE 179 Query: 197 LACGEAARVRVNGILIGLVESGQWRRRYAARGPELQDQSWARWTAALAARKQIQLGRLGL 256 A VRVNGILIGLVESGQWRRR+ AR E + WA WTA LA +K I LGRLGL Sbjct: 180 FA---PKGVRVNGILIGLVESGQWRRRFDARPEEDRHLDWAAWTARLARQKHIPLGRLGL 236 Query: 257 PREAAQAIVFLATPLSSYTTGSHIDVSGGLSRHA 290 P EAA+AI+FLA+PLSSYTTGSHID+SGG SRHA Sbjct: 237 PVEAARAILFLASPLSSYTTGSHIDISGGHSRHA 270 >ref|YP_001893022.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12J] ref|YP_002984548.1| short chain dehydrogenase [Ralstonia pickettii 12D] gb|ACD29595.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12J] gb|ACS65876.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12D] Length = 269 Score = 348 bits (893), Expect = 6e-94, Method: Composition-based stats. Identities = 200/274 (72%), Positives = 220/274 (80%), Gaps = 7/274 (2%) Query: 17 MAMTSLQGKVAVVTGGSSGIGLATVELLLEAGAAVAFCGRDGERLQHAEAALRERYPAAR 76 M M L GK AVVTGGSSGIGLATVELLLEAGA VA CGR+ ERL AE LR R+P AR Sbjct: 3 MPMIDLTGKTAVVTGGSSGIGLATVELLLEAGAVVALCGRNAERLAQAEQGLRSRFPNAR 62 Query: 77 LYSAPCDVLVQEQVRAFAASVENTLGPVSMLVNNAGQGRVSTFADTPDEAWSEELHLKFF 136 L++A CDVL Q+ AFA +VE LGPV MLVNNAGQGRVSTFADT D AW++ELHLKFF Sbjct: 63 LFAATCDVLDAAQMAAFADAVEQALGPVDMLVNNAGQGRVSTFADTDDAAWTQELHLKFF 122 Query: 137 SVIYPTRAFLPQLQAMSAQHGDAAIVCVNSLLATQPEPHMVATSAARAGVHNLVRSLATE 196 SVI+PTRAFLPQL+ ++HG AIVCVNSLLA QPEPHMVATSAARAGV NLVRS+ATE Sbjct: 123 SVIHPTRAFLPQLE--RSEHG--AIVCVNSLLAQQPEPHMVATSAARAGVLNLVRSMATE 178 Query: 197 LACGEAARVRVNGILIGLVESGQWRRRYAARGPELQDQSWARWTAALAARKQIQLGRLGL 256 A VRVNGILIGLVESGQWRRR+ AR E + WA WT LA +K I LGRLGL Sbjct: 179 FA---PKGVRVNGILIGLVESGQWRRRFEARPEEDRHLDWAAWTRRLATQKHIPLGRLGL 235 Query: 257 PREAAQAIVFLATPLSSYTTGSHIDVSGGLSRHA 290 P EAA+AI+FLA+PLSSYTTGSHID+SGG SRHA Sbjct: 236 PEEAARAILFLASPLSSYTTGSHIDISGGHSRHA 269 >ref|ZP_07674480.1| oxidoreductase, short chain dehydrogenase/reductase family [Ralstonia sp. 5_7_47FAA] gb|EFP67160.1| oxidoreductase, short chain dehydrogenase/reductase family [Ralstonia sp. 5_7_47FAA] Length = 269 Score = 342 bits (878), Expect = 3e-92, Method: Composition-based stats. Identities = 200/274 (72%), Positives = 220/274 (80%), Gaps = 7/274 (2%) Query: 17 MAMTSLQGKVAVVTGGSSGIGLATVELLLEAGAAVAFCGRDGERLQHAEAALRERYPAAR 76 M M L GK AVVTGGSSGIGLATVELLLEAGAAVA CGR+ ERL AE LR R+P AR Sbjct: 3 MPMIDLTGKTAVVTGGSSGIGLATVELLLEAGAAVALCGRNAERLAQAEQGLRSRFPNAR 62 Query: 77 LYSAPCDVLVQEQVRAFAASVENTLGPVSMLVNNAGQGRVSTFADTPDEAWSEELHLKFF 136 L +A CDVL Q+ AFA +VE +GPV MLVNNAGQGRVSTFADT D AW++ELHLKFF Sbjct: 63 LSAATCDVLDAAQMAAFADAVEQAVGPVDMLVNNAGQGRVSTFADTDDAAWTQELHLKFF 122 Query: 137 SVIYPTRAFLPQLQAMSAQHGDAAIVCVNSLLATQPEPHMVATSAARAGVHNLVRSLATE 196 SVI+PTRAF+PQL+ + HG AIVCVNSLLA QPEPHMVATSAARAGV NLVRS+ATE Sbjct: 123 SVIHPTRAFMPQLE--RSAHG--AIVCVNSLLAQQPEPHMVATSAARAGVLNLVRSMATE 178 Query: 197 LACGEAARVRVNGILIGLVESGQWRRRYAARGPELQDQSWARWTAALAARKQIQLGRLGL 256 A VRVNGILIGLVESGQWRRR+ AR E + WA WT LAA+K I LGRLGL Sbjct: 179 FA---PKGVRVNGILIGLVESGQWRRRFEARPEEDRHLDWAAWTRRLAAQKHIPLGRLGL 235 Query: 257 PREAAQAIVFLATPLSSYTTGSHIDVSGGLSRHA 290 P EAA+AI+FLA+PLSSYTTGSHID+SGG SRHA Sbjct: 236 PEEAARAILFLASPLSSYTTGSHIDISGGHSRHA 269 >ref|YP_004680886.1| 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Cupriavidus necator N-1] gb|AEI79654.1| 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Cupriavidus necator N-1] Length = 267 Score = 342 bits (876), Expect = 6e-92, Method: Composition-based stats. Identities = 202/274 (73%), Positives = 221/274 (80%), Gaps = 7/274 (2%) Query: 17 MAMTSLQGKVAVVTGGSSGIGLATVELLLEAGAAVAFCGRDGERLQHAEAALRERYPAAR 76 M+M L GKVAVVTGGSSGIGLATVELLLEAGAAVA CGRD RL+ AEA LRE++P R Sbjct: 1 MSMIELGGKVAVVTGGSSGIGLATVELLLEAGAAVAMCGRDESRLRSAEAQLREKFPGCR 60 Query: 77 LYSAPCDVLVQEQVRAFAASVENTLGPVSMLVNNAGQGRVSTFADTPDEAWSEELHLKFF 136 LY+A CDVL EQV AFAA+V+ TLG V MLVNNAGQGRVSTFA+T D AW EEL LKFF Sbjct: 61 LYAATCDVLKPEQVAAFAAAVQATLGNVDMLVNNAGQGRVSTFANTEDAAWMEELQLKFF 120 Query: 137 SVIYPTRAFLPQLQAMSAQHGDAAIVCVNSLLATQPEPHMVATSAARAGVHNLVRSLATE 196 SVI+PTRAFLPQL+ + G AIVCVNSLLA QPEPHMVATSAARAGV NLVRS+ATE Sbjct: 121 SVIHPTRAFLPQLE----KSGQGAIVCVNSLLAQQPEPHMVATSAARAGVLNLVRSMATE 176 Query: 197 LACGEAARVRVNGILIGLVESGQWRRRYAARGPELQDQSWARWTAALAARKQIQLGRLGL 256 A VRVNGILIGLVESGQWRRR+ AR + WA WTA LA +K I LGRLGL Sbjct: 177 FA---PKGVRVNGILIGLVESGQWRRRFEARPEADRHLDWAAWTARLAQQKHIPLGRLGL 233 Query: 257 PREAAQAIVFLATPLSSYTTGSHIDVSGGLSRHA 290 P EAA+AI+FLA+PLSSYTTGSH D+SGG SRHA Sbjct: 234 PVEAARAILFLASPLSSYTTGSHFDISGGHSRHA 267