BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2834.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004680883.1| 3-oxoacyl-[acyl-carrier-protein] reductase F... 337 1e-90 ref|YP_728893.1| short chain dehydrogenase [Ralstonia eutropha H... 336 2e-90 ref|YP_297773.1| short chain dehydrogenase [Ralstonia eutropha J... 332 3e-89 ref|YP_002007248.1| short chain dehydrogenase [Cupriavidus taiwa... 330 1e-88 ref|YP_001893026.1| short-chain dehydrogenase/reductase SDR [Ral... 323 1e-86 >ref|YP_004680883.1| 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Cupriavidus necator N-1] gb|AEI79651.1| 3-oxoacyl-[acyl-carrier-protein] reductase FabG [Cupriavidus necator N-1] Length = 257 Score = 337 bits (864), Expect = 1e-90, Method: Composition-based stats. Identities = 186/254 (73%), Positives = 216/254 (85%) Query: 5 ATSTATLLAGRRILVTGAARGLGLAFVEAIAAAGARVAMADILQDTLAASVSTLQQRGLA 64 A + TLLAGR++LVTGAARGLGLAFV+A+A AGA VAMADIL + L L+ RGL Sbjct: 4 ANTNNTLLAGRKVLVTGAARGLGLAFVKALAEAGATVAMADILAERLQQEADALRARGLK 63 Query: 65 VEGFSLDLADPASVQSCAQAAIAWLGGLDGLVNNAAITNSGGKSSEQLALEMWDRVMDVN 124 V +LDL+DPASVQ+CA+AA+ LGGLDGLVNNAA+T+SGG+ + + + WDRVM+VN Sbjct: 64 VVPVTLDLSDPASVQACAEAAVKALGGLDGLVNNAAVTDSGGRDAATIDIATWDRVMNVN 123 Query: 125 VRGTWLMTNACLPALRTSGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMTRSLAREVG 184 VRGTWLMT ACLPALR SGRGAIVNL+SDTPLWGAPNLLAYVASKSA+IGMTRSLARE+G Sbjct: 124 VRGTWLMTTACLPALRASGRGAIVNLASDTPLWGAPNLLAYVASKSAIIGMTRSLARELG 183 Query: 185 ADNITVNAVAPGLTLVEATEYVPRARHQHYLDGRALQRDQLPEDVCGAVVFALSDMARFF 244 D ITVNAVAPGLTLVEATEYVP+ RH Y + RA+ R+QLP+DVCGAV+FALSD+ARF Sbjct: 184 KDQITVNAVAPGLTLVEATEYVPQHRHDLYREQRAITREQLPDDVCGAVLFALSDLARFV 243 Query: 245 TGQVMAVNGGFVMH 258 TGQ +AVNGGFVMH Sbjct: 244 TGQTLAVNGGFVMH 257 >ref|YP_728893.1| short chain dehydrogenase [Ralstonia eutropha H16] emb|CAJ95528.1| Beta-ketoacyl-ACP reductase [Ralstonia eutropha H16] Length = 257 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 186/254 (73%), Positives = 216/254 (85%) Query: 5 ATSTATLLAGRRILVTGAARGLGLAFVEAIAAAGARVAMADILQDTLAASVSTLQQRGLA 64 A + TLLAGR++LVTGAARGLGLAFV+A+A AGA VAMADIL + L L+ RGL Sbjct: 4 ANTNNTLLAGRKVLVTGAARGLGLAFVKALAEAGATVAMADILAERLQQEADALRARGLK 63 Query: 65 VEGFSLDLADPASVQSCAQAAIAWLGGLDGLVNNAAITNSGGKSSEQLALEMWDRVMDVN 124 V +LDL+DPASVQ+CA+AA+ LGGLDGLVNNAA+T+SGG+ + + + WDRVM+VN Sbjct: 64 VVPVTLDLSDPASVQACAEAAVKALGGLDGLVNNAAVTDSGGRDAAAIDIATWDRVMNVN 123 Query: 125 VRGTWLMTNACLPALRTSGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMTRSLAREVG 184 VRGTWLMT ACLPALR SGRGAIVNL+SDTPLWGAPNLLAYVASKSA+IGMTRSLARE+G Sbjct: 124 VRGTWLMTTACLPALRASGRGAIVNLASDTPLWGAPNLLAYVASKSAIIGMTRSLARELG 183 Query: 185 ADNITVNAVAPGLTLVEATEYVPRARHQHYLDGRALQRDQLPEDVCGAVVFALSDMARFF 244 D ITVNAVAPGLTLVEATEYVP+ RH Y + RA+ R+QLP+DVCGAV+FALSD+ARF Sbjct: 184 KDQITVNAVAPGLTLVEATEYVPQHRHDLYREQRAITREQLPDDVCGAVLFALSDLARFV 243 Query: 245 TGQVMAVNGGFVMH 258 TGQ +AVNGGFVMH Sbjct: 244 TGQTLAVNGGFVMH 257 >ref|YP_297773.1| short chain dehydrogenase [Ralstonia eutropha JMP134] gb|AAZ62929.1| Short-chain dehydrogenase/reductase SDR [Ralstonia eutropha JMP134] Length = 256 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 181/256 (70%), Positives = 212/256 (82%) Query: 3 MSATSTATLLAGRRILVTGAARGLGLAFVEAIAAAGARVAMADILQDTLAASVSTLQQRG 62 M + LLAGR++LVTGAARGLGLAFV+++ AGA VAMADIL D L L+ RG Sbjct: 1 MPEANNNGLLAGRKVLVTGAARGLGLAFVKSLTEAGAAVAMADILADRLQQEADALRARG 60 Query: 63 LAVEGFSLDLADPASVQSCAQAAIAWLGGLDGLVNNAAITNSGGKSSEQLALEMWDRVMD 122 V +DL+DPASVQ+CA AAI LGGLDGLVNNAA+T+SGG+ + + + WDRVM+ Sbjct: 61 FKVVAVPVDLSDPASVQACADAAIKGLGGLDGLVNNAAVTDSGGRDASAIDVATWDRVMN 120 Query: 123 VNVRGTWLMTNACLPALRTSGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMTRSLARE 182 VNVRGTWLMT ACLPAL+ SGRGA++NL+SDTPLWGAPNLLAYVASKSA+IGMTRSLARE Sbjct: 121 VNVRGTWLMTTACLPALKASGRGAVINLASDTPLWGAPNLLAYVASKSAIIGMTRSLARE 180 Query: 183 VGADNITVNAVAPGLTLVEATEYVPRARHQHYLDGRALQRDQLPEDVCGAVVFALSDMAR 242 +G D ITVNAVAPGLTLVEATEYVP+ RH Y + RA+QR+QLP+DVCGAV+FALSD+AR Sbjct: 181 LGRDQITVNAVAPGLTLVEATEYVPQHRHDLYREQRAIQREQLPDDVCGAVLFALSDLAR 240 Query: 243 FFTGQVMAVNGGFVMH 258 F TGQ +AVNGGFVMH Sbjct: 241 FVTGQTLAVNGGFVMH 256 >ref|YP_002007248.1| short chain dehydrogenase [Cupriavidus taiwanensis LMG 19424] emb|CAQ71187.1| putative Short-chain dehydrogenase/reductase SDR [Cupriavidus taiwanensis LMG 19424] Length = 257 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 183/254 (72%), Positives = 213/254 (83%) Query: 5 ATSTATLLAGRRILVTGAARGLGLAFVEAIAAAGARVAMADILQDTLAASVSTLQQRGLA 64 A TLLAGR++LVTGAARGLGLAF ++A AGA VAMADIL + L L+ RGL Sbjct: 4 AIKNQTLLAGRKVLVTGAARGLGLAFATSLAEAGASVAMADILAERLQQEADALRARGLK 63 Query: 65 VEGFSLDLADPASVQSCAQAAIAWLGGLDGLVNNAAITNSGGKSSEQLALEMWDRVMDVN 124 V +LDL+DPASVQ+CA AA+ LGGLDGLVNNAA+T+SGG+++ + + WDRVM+VN Sbjct: 64 VVPVTLDLSDPASVQACADAAVKALGGLDGLVNNAAVTDSGGRAASAIDIATWDRVMNVN 123 Query: 125 VRGTWLMTNACLPALRTSGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMTRSLAREVG 184 VRGTWLMT ACLPALR SGRGA+VNL+SDTPLWGAPNLLAYVASKSA+IGMTRSLARE+G Sbjct: 124 VRGTWLMTTACLPALRASGRGAVVNLASDTPLWGAPNLLAYVASKSAIIGMTRSLARELG 183 Query: 185 ADNITVNAVAPGLTLVEATEYVPRARHQHYLDGRALQRDQLPEDVCGAVVFALSDMARFF 244 D ITVNAVAPGLTLVEATEYVP+ RH Y + RA+ R+QLP+DVCGAV+FALSD+ARF Sbjct: 184 RDQITVNAVAPGLTLVEATEYVPQHRHDLYREQRAISREQLPDDVCGAVLFALSDLARFV 243 Query: 245 TGQVMAVNGGFVMH 258 TGQ +AVNGGFVMH Sbjct: 244 TGQTLAVNGGFVMH 257 >ref|YP_001893026.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12J] ref|YP_002984552.1| short chain dehydrogenase [Ralstonia pickettii 12D] ref|ZP_07674476.1| oxidoreductase, short chain dehydrogenase/reductase family [Ralstonia sp. 5_7_47FAA] gb|ACD29599.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12J] gb|ACS65880.1| short-chain dehydrogenase/reductase SDR [Ralstonia pickettii 12D] gb|EFP67156.1| oxidoreductase, short chain dehydrogenase/reductase family [Ralstonia sp. 5_7_47FAA] Length = 257 Score = 323 bits (829), Expect = 1e-86, Method: Composition-based stats. Identities = 184/252 (73%), Positives = 210/252 (83%) Query: 7 STATLLAGRRILVTGAARGLGLAFVEAIAAAGARVAMADILQDTLAASVSTLQQRGLAVE 66 STA LLAGR++LVTGAARGLGLAF ++IA AG VA+ADIL + + + L+ G Sbjct: 6 STAGLLAGRKVLVTGAARGLGLAFAKSIAEAGGAVALADILGERVQEEAAALRAAGFDAH 65 Query: 67 GFSLDLADPASVQSCAQAAIAWLGGLDGLVNNAAITNSGGKSSEQLALEMWDRVMDVNVR 126 GF+LDL DPAS+Q+CA AA LGGLDGLVNNAAITNSGG+ + + +E WDRVM+VNVR Sbjct: 66 GFTLDLGDPASIQACAAAAAQALGGLDGLVNNAAITNSGGRDASSIDIETWDRVMNVNVR 125 Query: 127 GTWLMTNACLPALRTSGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMTRSLAREVGAD 186 GTWLMT ACLPAL+ SGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMT+SLARE GAD Sbjct: 126 GTWLMTTACLPALKASGRGAIVNLSSDTPLWGAPNLLAYVASKSAVIGMTKSLARECGAD 185 Query: 187 NITVNAVAPGLTLVEATEYVPRARHQHYLDGRALQRDQLPEDVCGAVVFALSDMARFFTG 246 ITVNA+APGLTLVEATEYVP RH Y D RA+ RDQLP+DVCGAV+FALSD++RF TG Sbjct: 186 GITVNAIAPGLTLVEATEYVPAHRHALYRDQRAISRDQLPDDVCGAVLFALSDLSRFVTG 245 Query: 247 QVMAVNGGFVMH 258 Q +AVNGGFVM Sbjct: 246 QTLAVNGGFVMQ 257