BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2831.p (261 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_252204.1| ATP-binding component of ABC transporter [Pseud... 387 e-106 ref|YP_673381.1| ABC transporter related [Mesorhizobium sp. BNC1... 288 7e-76 ref|YP_004473366.1| Taurine-transporting ATPase [Pseudomonas ful... 230 1e-58 ref|YP_001325181.1| ABC transporter related [Methanococcus aeoli... 219 4e-55 ref|YP_003827896.1| nitrate/sulfonate/bicarbonate ABC transporte... 218 6e-55 >ref|NP_252204.1| ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAO1] gb|AAG06902.1|AE004771_11 probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAO1] Length = 283 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 204/260 (78%), Positives = 224/260 (86%), Gaps = 1/260 (0%) Query: 2 IEIEFRKVGKSFVDRQTAQARAAVTNVNLSIKSGEVVSIIGPSGCGKSTLLNMGAGLYLP 61 +EIEFR V K F R + A AV ++L+I+ GEVVSIIGPSGCGKSTLLNMGAGLY P Sbjct: 25 LEIEFRGVAKHFPGRGKSAATLAVQGLDLAIRRGEVVSIIGPSGCGKSTLLNMGAGLYAP 84 Query: 62 SEGEVFVGGEKVIKPVRKVAFMLQKDLLMPWRNIRANVTLGLEIDGMREAERRRIADELL 121 SEGEV VGGE+V PVRKV+FMLQKDLLMPWR+IR N+ LGLEIDG ERR IA+E+L Sbjct: 85 SEGEVRVGGERVSGPVRKVSFMLQKDLLMPWRSIRRNIELGLEIDGRAAGERRAIAEEML 144 Query: 122 AKCHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLLDEPFSALDAQTKMVLQQDLAK 181 KCHL GF EHYP+QLSGGMRQRAALARTLA DPQVL LDEPFSALDAQTKM+LQQDLA+ Sbjct: 145 EKCHLAGFAEHYPFQLSGGMRQRAALARTLATDPQVLFLDEPFSALDAQTKMILQQDLAR 204 Query: 182 MLYEKKKTALFITHDLVEAIALSDRLLVMSERPGTIVEEIEVNLPFRDNPLERRKLPEIG 241 ML E++KTALFITHDLVEAIA+SDR+LVMS RPGTIVEEIEV LP RDNPLERRKLPEIG Sbjct: 205 MLCEQRKTALFITHDLVEAIAMSDRILVMSARPGTIVEEIEVGLPLRDNPLERRKLPEIG 264 Query: 242 PLQGRLMELLKVGKETAELH 261 PL GRLM LLKVG E+AELH Sbjct: 265 PLVGRLMTLLKVG-ESAELH 283 >ref|YP_673381.1| ABC transporter related [Mesorhizobium sp. BNC1] gb|ABG62216.1| ABC transporter related protein [Chelativorans sp. BNC1] Length = 263 Score = 288 bits (736), Expect = 7e-76, Method: Composition-based stats. Identities = 142/258 (55%), Positives = 187/258 (72%), Gaps = 1/258 (0%) Query: 2 IEIEFRKVGKSFVDRQTA-QARAAVTNVNLSIKSGEVVSIIGPSGCGKSTLLNMGAGLYL 60 + +EFR V K F + + + AV ++N ++ GE VS++GPSGCGKST+++M AGLY Sbjct: 6 MALEFRGVAKQFGNINSGTEVLTAVKDINFAVGRGEFVSVVGPSGCGKSTIMSMTAGLYK 65 Query: 61 PSEGEVFVGGEKVIKPVRKVAFMLQKDLLMPWRNIRANVTLGLEIDGMREAERRRIADEL 120 P+EGEV V GE V+ P V FMLQKDLL+PWR+I NV GLE G+ +RR A Sbjct: 66 PTEGEVLVSGETVVGPNSHVGFMLQKDLLLPWRSIIKNVEFGLEARGVPARQRRERAMAE 125 Query: 121 LAKCHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLLDEPFSALDAQTKMVLQQDLA 180 L +CHLKGFE HYPYQLSGGMRQRAALARTLA+DP ++LLDEPFSALDAQTK+++Q A Sbjct: 126 LERCHLKGFENHYPYQLSGGMRQRAALARTLAIDPDIILLDEPFSALDAQTKLLIQNSFA 185 Query: 181 KMLYEKKKTALFITHDLVEAIALSDRLLVMSERPGTIVEEIEVNLPFRDNPLERRKLPEI 240 K + + TAL ITHDL EA+ +SDR+LV+SERPGTI+ E+ V++P R PL RR++P++ Sbjct: 186 KTIQDAGITALLITHDLSEAVIMSDRVLVLSERPGTIIHELAVDIPDRGQPLARRQMPQV 245 Query: 241 GPLQGRLMELLKVGKETA 258 ++ LLK+ + A Sbjct: 246 HGYAAQIFNLLKLNERAA 263 >ref|YP_004473366.1| Taurine-transporting ATPase [Pseudomonas fulva 12-X] gb|AEF21272.1| Taurine-transporting ATPase [Pseudomonas fulva 12-X] Length = 275 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 124/248 (50%), Positives = 166/248 (66%), Gaps = 2/248 (0%) Query: 4 IEFRKVGKSFVDRQTAQARAAVTNVNLSIKSGEVVSIIGPSGCGKSTLLNMGAGLYLPSE 63 I FR V KSF + + A ++N+ I+ G+VV+IIGPSGCGKSTLLNM AGL+ P+ Sbjct: 24 ISFRDVSKSFTVKGVT--KQASHSINVDIQQGQVVTIIGPSGCGKSTLLNMVAGLFAPTT 81 Query: 64 GEVFVGGEKVIKPVRKVAFMLQKDLLMPWRNIRANVTLGLEIDGMREAERRRIADELLAK 123 GEV GE+V + +M Q D L+PWR++ +N+ LEI G+ +A+R+ EL+A Sbjct: 82 GEVVYRGEQVAGINGRTGYMTQSDHLLPWRDVASNIATPLEIQGVPKAQRQARIAELMAL 141 Query: 124 CHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLLDEPFSALDAQTKMVLQQDLAKML 183 L G E+ YP QLSGGMR+RAALAR LA DP+ LL+DEPF+ALDAQ ++ +Q +L K+ Sbjct: 142 VGLTGNEKAYPSQLSGGMRKRAALARLLAYDPETLLMDEPFAALDAQLRLRMQTELFKLS 201 Query: 184 YEKKKTALFITHDLVEAIALSDRLLVMSERPGTIVEEIEVNLPFRDNPLERRKLPEIGPL 243 + KKT LF+THDL EA+AL DR L+ S RPGTIV ++ + L N L+ RK P L Sbjct: 202 RQLKKTVLFVTHDLDEAVALGDRCLIFSGRPGTIVRDVPIPLGDDRNILQLRKDPRYHEL 261 Query: 244 QGRLMELL 251 G L E + Sbjct: 262 CGDLWEFI 269 >ref|YP_001325181.1| ABC transporter related [Methanococcus aeolicus Nankai-3] gb|ABR56569.1| ABC transporter related [Methanococcus aeolicus Nankai-3] Length = 258 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 114/249 (45%), Positives = 167/249 (67%), Gaps = 6/249 (2%) Query: 4 IEFRKVGKSFVDRQTAQARAAVTNVNLSIKSGEVVSIIGPSGCGKSTLLNMGAGLYLPSE 63 +E R VGK F+ + + AV +VN S+ S E +SI+GPSGCGKSTLL M AGL P+ Sbjct: 5 LELRNVGKKFITER--KEVVAVEDVNFSVNSNEFLSIVGPSGCGKSTLLRMIAGLEKPTS 62 Query: 64 GEVFVGGEKVIKPVRKVAFMLQKDLLMPWRNIRANVTLGLEIDGMREAERRRIADELLAK 123 G + + G K+ KP + + Q+ L+PW+ + NV LGLEI GM++ ER +IA + Sbjct: 63 GTLILEGNKIEKPDAERGMVFQQYTLLPWKTVLGNVALGLEIKGMKKEERNKIAKNFIKL 122 Query: 124 CHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLLDEPFSALDAQTKMVLQQDLAKML 183 L+ FE YPY+LSGGM+QR A+ARTLA DP+++L+DEPF ALD QT+++LQ +L K+ Sbjct: 123 IGLEEFENSYPYELSGGMQQRVAIARTLANDPKIVLMDEPFGALDTQTRVILQNELLKIW 182 Query: 184 YEKKKTALFITHDLVEAIALSDRLLVMSERPGTIVEEIEVNLPFRDNPLERRKLPEIGPL 243 + KKT +FITH + EA+ LSDR+++MS RPG I + + +++ D P +R PE Sbjct: 183 EKDKKTVVFITHSVEEAVYLSDRVIIMSARPGKIKDIVNIDI---DRP-RKRTSPEFLEY 238 Query: 244 QGRLMELLK 252 + +++ +LK Sbjct: 239 KNKIVSILK 247 >ref|YP_003827896.1| nitrate/sulfonate/bicarbonate ABC transporter ATPase [Acetohalobium arabaticum DSM 5501] gb|ADL12831.1| ABC transporter related protein [Acetohalobium arabaticum DSM 5501] Length = 255 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 162/225 (72%), Gaps = 2/225 (0%) Query: 1 MIEIEFRKVGKSFVDRQTAQARAAVTNVNLSIKSGEVVSIIGPSGCGKSTLLNMGAGLYL 60 M +I+F++VG + A+ A+ +++ S++ E VS++GPSGCGK+T L++ +GL Sbjct: 1 MNKIQFKEVGMKY--HTVAEETEALKDLSFSVEENEFVSLVGPSGCGKTTALSLVSGLLS 58 Query: 61 PSEGEVFVGGEKVIKPVRKVAFMLQKDLLMPWRNIRANVTLGLEIDGMREAERRRIADEL 120 P+ G+V + G++V KV +MLQ+D L PWR I N+ +GLE+ A+ R+ A +L Sbjct: 59 PTSGQVTIDGKRVKGIDEKVGYMLQEDYLFPWRTILDNILIGLEVKDELTAKSRQKARQL 118 Query: 121 LAKCHLKGFEEHYPYQLSGGMRQRAALARTLAVDPQVLLLDEPFSALDAQTKMVLQQDLA 180 LA L+GF ++YP QLSGGMRQR ALARTL +P++LLLDEPFSALD TK+ L+ ++A Sbjct: 119 LADYGLEGFADYYPTQLSGGMRQRVALARTLIFEPEILLLDEPFSALDYHTKLTLEDEVA 178 Query: 181 KMLYEKKKTALFITHDLVEAIALSDRLLVMSERPGTIVEEIEVNL 225 ++L K+KT + +THD+ EA+A+SDR+LV +ERPG+I EE +++L Sbjct: 179 QILRNKEKTVVLVTHDIAEAVAMSDRVLVFTERPGSIKEEYKIDL 223