BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2823.p (490 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_785209.1| dihydropyrimidinase [Bordetella avium 197N] >gi... 714 0.0 ref|ZP_08404313.1| dihydropyrimidinase [Hylemonella gracilis ATC... 699 0.0 gb|EGP42485.1| dihydropyrimidinase [Achromobacter xylosoxidans A... 604 e-170 ref|YP_001238201.1| dihydropyrimidinase [Bradyrhizobium sp. BTAi... 512 e-143 ref|YP_727518.1| dihydropyrimidinase [Ralstonia eutropha H16] >g... 504 e-140 >ref|YP_785209.1| dihydropyrimidinase [Bordetella avium 197N] emb|CAJ48282.1| D-hydantoinase [Bordetella avium 197N] Length = 499 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 347/488 (71%), Positives = 398/488 (81%), Gaps = 6/488 (1%) Query: 3 FDLTIRNGRISTDRETFFADIGVKDGVIARIAPHLPPGREDIDAAGRWVLPGGIDSHCHI 62 FDLT+R GRIS TFFADIG++DG+I I L PG ED+DA+G W+LPGGIDSH HI Sbjct: 11 FDLTLRKGRISNADGTFFADIGIRDGIIVEIGQDLSPGIEDVDASGMWLLPGGIDSHTHI 70 Query: 63 EQLSGMGMMCADDFYSGTVSAAFGGTTTIIPFAAQHRGNRIPDVIADYAQRAREKAVIDY 122 EQLSGMG+MCADDFYSGTVSAAFGGTTTII FAAQHR +RIP+V+ADY++RA EKAVIDY Sbjct: 71 EQLSGMGVMCADDFYSGTVSAAFGGTTTIISFAAQHRNDRIPEVLADYSRRASEKAVIDY 130 Query: 123 GFHLILADPDEQALQHDLPQAIRDGITSLKVYMTYNALKLDDYQLLDVMALAGREGALVM 182 GFHLILA+PDEQAL +LP I GITS+KVYMTY+ L+LDDYQLLDV+A+A GA+VM Sbjct: 131 GFHLILANPDEQALTQELPAVIAQGITSIKVYMTYDKLRLDDYQLLDVLAVADEHGAMVM 190 Query: 183 IHAENHDMIRWLASRLLDQGHTAPKFHAVAHDPLAEAEASQRAIALSRLIGVPVLIVHVA 242 +HAENHDMIRW+A RLL++GH APKFH V+HDPLAE+EA+ RAIALSRL+ VPVLIVHVA Sbjct: 191 LHAENHDMIRWVARRLLERGHKAPKFHGVSHDPLAESEATHRAIALSRLLDVPVLIVHVA 250 Query: 243 GAETVQTIRNAKLLGAQIYAESCPQYLFLTAEDIDLPGVEGAKYCCSPPPRDANAQEAVW 302 GA+TV IR A+ LGAQ+YAESCPQYLFL A D DLPG+EGAK+CCSPPP D +QEAVW Sbjct: 251 GAQTVDIIRRARQLGAQVYAESCPQYLFLEATDADLPGLEGAKFCCSPPPGDKFSQEAVW 310 Query: 303 AGLKDGTLGMYSSDHAPYRFDESGKLPRGEDTTFKEMANGVPGIELRLPLLFSEGVLKGR 362 AG KDGTLG+YSSDHAPYRFD SGKLP+G+ TTFKEMANGVPGIELRLPLLFSEGV+KGR Sbjct: 311 AGFKDGTLGVYSSDHAPYRFDASGKLPKGDATTFKEMANGVPGIELRLPLLFSEGVIKGR 370 Query: 363 LDIHEFVRLTATNHAHMYGLSHCKGNIAEGLDADLVIWNPERETTITAALLHDNVGYTPY 422 L I EFV LTATNHA MYGL+ KG IA G DAD+ IW+P R TT+TA+LLHD VGYTPY Sbjct: 371 LSIEEFVALTATNHARMYGLAPRKGAIAVGADADIAIWDPARRTTVTASLLHDAVGYTPY 430 Query: 423 EGRQIRGWPEVVTSRGRVVVSEGELKVARGSGRFIARQCPAPASIAQRPT----RSHLPG 478 EGR++ GWP V SRGR ++ L RGSG+FIAR P P + RP R Sbjct: 431 EGRELTGWPVEVYSRGRCIIRNNTLHAERGSGQFIARSRPDP--VMHRPASSEDRKRFGD 488 Query: 479 LLGLKGKA 486 +GLK A Sbjct: 489 FVGLKSAA 496 >ref|ZP_08404313.1| dihydropyrimidinase [Hylemonella gracilis ATCC 19624] gb|EGI78510.1| dihydropyrimidinase [Hylemonella gracilis ATCC 19624] Length = 488 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 347/484 (71%), Positives = 398/484 (82%), Gaps = 2/484 (0%) Query: 1 MDFDLTIRNGRISTDRETFFADIGVKDGVIARIAPHLPPGREDIDAAGRWVLPGGIDSHC 60 MDFDLTIR+GR+ + ADIG++DG IA +AP LP GRED+DA GRWVLPGGIDSHC Sbjct: 1 MDFDLTIRHGRVCNADGSVEADIGIRDGRIAALAPTLPAGREDVDATGRWVLPGGIDSHC 60 Query: 61 HIEQLSGMGMMCADDFYSGTVSAAFGGTTTIIPFAAQHRGNRIPDVIADYAQRAREKAVI 120 HIEQLSGMG+MCADDFYSGTVSAAFGGTTTI+ FAAQHR + IP V+ADY +RA EKAVI Sbjct: 61 HIEQLSGMGVMCADDFYSGTVSAAFGGTTTILSFAAQHRKDEIPAVLADYHRRAAEKAVI 120 Query: 121 DYGFHLILADPDEQALQHDLPQAIRDGITSLKVYMTYNALKLDDYQLLDVMALAGREGAL 180 DYGFHLIL +PDE AL+ LPQA+RDGI+SLKVYMTY+ LKLDDYQLLDV+A AG GAL Sbjct: 121 DYGFHLILTNPDETALRVHLPQAVRDGISSLKVYMTYDKLKLDDYQLLDVLATAGELGAL 180 Query: 181 VMIHAENHDMIRWLASRLLDQGHTAPKFHAVAHDPLAEAEASQRAIALSRLIGVPVLIVH 240 VM+HAENHDMIRW+A RLL++GHTAPKFHAVAHD LAE EA+ RAIALSRL+ VPVLIVH Sbjct: 181 VMLHAENHDMIRWIAHRLLERGHTAPKFHAVAHDALAETEATHRAIALSRLVDVPVLIVH 240 Query: 241 VAGAETVQTIRNAKLLGAQIYAESCPQYLFLTAEDIDLPGVEGAKYCCSPPPRDANAQEA 300 VAG ETV IR A+ LGA + AESCPQYLFL A D D PG++GAK+CCSPPPRDA +QEA Sbjct: 241 VAGQETVALIRAAQQLGASVLAESCPQYLFLKAHDSDRPGMDGAKFCCSPPPRDAASQEA 300 Query: 301 VWAGLKDGTLGMYSSDHAPYRFDESGKLPRGEDTTFKEMANGVPGIELRLPLLFSEGVLK 360 VW GL DGTLG++SSDHAPYRFD SGKLP+GE TTFKEMANGVPGIELRLPLLFSEGV+ Sbjct: 301 VWTGLLDGTLGVFSSDHAPYRFDVSGKLPKGEATTFKEMANGVPGIELRLPLLFSEGVMT 360 Query: 361 GRLDIHEFVRLTATNHAHMYGLSHCKGNIAEGLDADLVIWNPERETTITAALLHDNVGYT 420 GR+ I +FV LTATNHA +YGL+ KG+IA G DAD+ +W+P R + A +LHDNVGYT Sbjct: 361 GRMSIEQFVALTATNHARLYGLAPRKGSIAVGADADIALWDPSRVVEVRADMLHDNVGYT 420 Query: 421 PYEGRQIRGWPEVVTSRGRVVVSEGELKVARGSGRFIAR-QCPAPASIAQR-PTRSHLPG 478 PYEGR+I GWP V SRGR VV G+L ARGSG+F+AR + A + QR P R Sbjct: 421 PYEGRRITGWPTEVYSRGRPVVRAGKLLAARGSGQFVARGRSSALRPVTQRDPARGAFSA 480 Query: 479 LLGL 482 L+GL Sbjct: 481 LVGL 484 >gb|EGP42485.1| dihydropyrimidinase [Achromobacter xylosoxidans AXX-A] Length = 489 Score = 604 bits (1557), Expect = e-170, Method: Composition-based stats. Identities = 293/468 (62%), Positives = 359/468 (76%) Query: 2 DFDLTIRNGRISTDRETFFADIGVKDGVIARIAPHLPPGREDIDAAGRWVLPGGIDSHCH 61 DFDLT+ NGRI T F DIG+ DG IA IA LP GR IDAAGR V+PGGIDSHCH Sbjct: 3 DFDLTLHNGRIVTADADFVGDIGIVDGAIAAIAATLPAGRRAIDAAGRLVMPGGIDSHCH 62 Query: 62 IEQLSGMGMMCADDFYSGTVSAAFGGTTTIIPFAAQHRGNRIPDVIADYAQRAREKAVID 121 +EQLS MG++CADD+++ ++SAA GG TTI+PFAAQHRG + V YA A EK+VID Sbjct: 63 VEQLSSMGVLCADDWHTASISAAHGGNTTIVPFAAQHRGQSLRQVADAYAASAAEKSVID 122 Query: 122 YGFHLILADPDEQALQHDLPQAIRDGITSLKVYMTYNALKLDDYQLLDVMALAGREGALV 181 Y +HLI++DP + L DLP+ IR GITS KV+MTY+ LKLDD QLLDV A+A REGAL Sbjct: 123 YSYHLIISDPTPETLNRDLPELIRAGITSFKVFMTYDKLKLDDRQLLDVFAIAAREGALP 182 Query: 182 MIHAENHDMIRWLASRLLDQGHTAPKFHAVAHDPLAEAEASQRAIALSRLIGVPVLIVHV 241 M+HAEN+D+I W+A LL GHTAPK+HAV+HDP+AE EA+QRAI+L+ ++ VPVLIVHV Sbjct: 183 MVHAENNDVISWIARHLLAAGHTAPKYHAVSHDPIAENEATQRAISLAAVLEVPVLIVHV 242 Query: 242 AGAETVQTIRNAKLLGAQIYAESCPQYLFLTAEDIDLPGVEGAKYCCSPPPRDANAQEAV 301 + Q I A+ LGA +Y E+CP YL LTAEDID+PGVEGAK+CCSPPPRD +Q+A+ Sbjct: 243 STQGGAQAIHAAQTLGAPVYGETCPHYLLLTAEDIDIPGVEGAKFCCSPPPRDPVSQQAL 302 Query: 302 WAGLKDGTLGMYSSDHAPYRFDESGKLPRGEDTTFKEMANGVPGIELRLPLLFSEGVLKG 361 W L GTL + SSDHAPYR+DESGKLP G+ TTFK++ANG+PG+E+R+PLLFSEGV G Sbjct: 303 WQSLDSGTLALLSSDHAPYRYDESGKLPAGDATTFKQIANGLPGLEVRMPLLFSEGVRSG 362 Query: 362 RLDIHEFVRLTATNHAHMYGLSHCKGNIAEGLDADLVIWNPERETTITAALLHDNVGYTP 421 RL + +FV LT+TNHA MYGL KG +A G DAD+ IW+PE+ T+ AA LHD VGYTP Sbjct: 363 RLTLQQFVALTSTNHARMYGLYPKKGTLAVGADADIAIWDPEKTVTLRAADLHDAVGYTP 422 Query: 422 YEGRQIRGWPEVVTSRGRVVVSEGELKVARGSGRFIARQCPAPASIAQ 469 YEGRQ+ GWP V SRG V+V +G L+ RG G+FIAR PAP A+ Sbjct: 423 YEGRQVTGWPTTVISRGEVIVDDGVLRAERGRGQFIARGLPAPLQKAR 470 >ref|YP_001238201.1| dihydropyrimidinase [Bradyrhizobium sp. BTAi1] gb|ABQ34295.1| dihydropyrimidinase [Bradyrhizobium sp. BTAi1] Length = 489 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 251/477 (52%), Positives = 338/477 (70%), Gaps = 4/477 (0%) Query: 3 FDLTIRNGRISTDRETFFADIGVKDGVIARIAPHLPPGREDIDAAGRWVLPGGIDSHCHI 62 +DL IR GR++T +TF AD+ + IA I L P + +IDA G++VLPGG+DSHCHI Sbjct: 6 YDLIIRGGRVATTTDTFEADVAISGETIAAIGHGLGPAKREIDARGKYVLPGGVDSHCHI 65 Query: 63 EQLSGMGMMCADDFYSGTVSAAFGGTTTIIPFAAQHRGNRIPDVIADYAQRAREKAVIDY 122 EQLS G++ AD F S T SAAFGGTT++I FAAQH G +P V+ DY AR+ AVIDY Sbjct: 66 EQLSAAGIVNADTFESATTSAAFGGTTSVISFAAQHVGMLLPQVVEDYHALARKGAVIDY 125 Query: 123 GFHLILADPDEQALQHDLPQAIRDGITSLKVYMTYNALKLDDYQLLDVMALAGREGALVM 182 FH+I+ADP ++ L+ DLP IR G S+K++MTY+ LK+DD LLD++ A GA++ Sbjct: 126 AFHMIVADPTKETLERDLPALIRQGHGSIKIFMTYDRLKIDDEPLLDILVAAREGGAMLC 185 Query: 183 IHAENHDMIRWLASRLLDQGHTAPKFHAVAHDPLAEAEASQRAIALSRLIGVPVLIVHVA 242 HAENH +I W+ RLL +G+TAPK+HA++H +EAEA R I ++ L+ P++I HV+ Sbjct: 186 AHAENHGIISWMVKRLLARGYTAPKYHAISHARFSEAEAFNRLIGMAALVDQPIMIFHVS 245 Query: 243 GAETVQTIRNAKLLGAQIYAESCPQYLFLTAEDIDLPGVEGAKYCCSPPPRDANAQEAVW 302 AE + IR+A+ LG +++AE+CPQYLF+TA+D+D PG+EGAK+ CSPPPR A QEA+W Sbjct: 246 TAEGAKVIRDARGLGLKVFAETCPQYLFMTADDLDKPGIEGAKWMCSPPPRRAPDQEALW 305 Query: 303 AGLKDGTLGMYSSDHAPYRFDESGKLPRGEDTTFKEMANGVPGIELRLPLLFSEGVLKGR 362 L G L SSDHAPYRFDE+GKL G + FK++ANG+PG+ELRLPLLF V KGR Sbjct: 306 QALSLGDLQTISSDHAPYRFDETGKLRAGPNPNFKQIANGLPGLELRLPLLFDAMVSKGR 365 Query: 363 LDIHEFVRLTATNHAHMYGLSHCKGNIAEGLDADLVIWNPERETTITAALLHDNVGYTPY 422 L +++FV LTAT+ A +Y L KG IA G DAD+ +W+P++ TI+ A +HD GYTP+ Sbjct: 366 LGLNKFVELTATSPAKIYNLHPKKGAIAIGADADIALWDPDKRVTISDADMHDLAGYTPF 425 Query: 423 EGRQIRGWPEVVTSRGRVVVSEGELKVARGSGRFIARQCPAPASIAQRPTRSHLPGL 479 GR ++GWP V SRGRV+V G+L V GSG+F+AR A +PT +P + Sbjct: 426 AGRSVQGWPVTVLSRGRVIVDGGKLLVQPGSGQFLARS----GGEAAKPTGRLVPDM 478 >ref|YP_727518.1| dihydropyrimidinase [Ralstonia eutropha H16] emb|CAJ94150.1| D-Hydantoinase [Ralstonia eutropha H16] Length = 494 Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats. Identities = 250/464 (53%), Positives = 325/464 (70%), Gaps = 1/464 (0%) Query: 3 FDLTIRNGRISTDRETFFADIGVKDGVIARIAPHLPPGREDIDAAGRWVLPGGIDSHCHI 62 FDL IRNG + T +T DIG+ G I ++ L + IDA+G+ VLPGG+D+HCH+ Sbjct: 20 FDLIIRNGTVVTASDTMQCDIGIAGGRIVQLGHDLGEAAQTIDASGKLVLPGGVDAHCHL 79 Query: 63 EQLSGMGMMCADDFYSGTVSAAFGGTTTIIPFAAQHRGNRIPDVIADYAQRAREKAVIDY 122 +Q G+ ADDF +G+VSAA GGTTT+IPFAAQ +G+ + + DY QRA KAV+DY Sbjct: 80 DQPMPDGLRMADDFGTGSVSAACGGTTTVIPFAAQEKGHSLRAAVNDYHQRADGKAVVDY 139 Query: 123 GFHLILADPDEQALQHDLPQAIRDGITSLKVYMTYNALKLDDYQLLDVMALAGREGALVM 182 FHLI+ADP E LQ +LP IR+G +S KVYMTY+ LKL+D ++L+V+++A +EGALVM Sbjct: 140 AFHLIVADPTEAVLQDELPGLIREGYSSFKVYMTYDDLKLNDREILEVLSVARQEGALVM 199 Query: 183 IHAENHDMIRWLASRLLDQGHTAPKFHAVAHDPLAEAEASQRAIALSRLIGVPVLIVHVA 242 +HAEN D I WL +L G+TAPKFHA+A E EA+ RAI S L+ VP+LIVHV+ Sbjct: 200 VHAENSDCIAWLTEKLEAAGNTAPKFHALARPMAIEREATHRAITFSELVDVPILIVHVS 259 Query: 243 GAETVQTIRNAKLLGAQIYAESCPQYLFLTAEDIDLPGVEGAKYCCSPPPRDANAQEAVW 302 G E V+ IR A+ G +I+AE+CPQYLFLTAED+D PG GAK CSPPPRD + QE +W Sbjct: 260 GKEAVEQIRWARNRGMKIFAETCPQYLFLTAEDLDQPGYHGAKCVCSPPPRDRSNQEVIW 319 Query: 303 AGLKDGTLGMYSSDHAPYRF-DESGKLPRGEDTTFKEMANGVPGIELRLPLLFSEGVLKG 361 GL DG ++SSDHAP+R+ D GK P G++ F+ + NG+PG+E RLPLLFS GV+ G Sbjct: 320 DGLADGLFTIFSSDHAPFRYEDAQGKKPGGKEVPFQYIPNGIPGLETRLPLLFSAGVVGG 379 Query: 362 RLDIHEFVRLTATNHAHMYGLSHCKGNIAEGLDADLVIWNPERETTITAALLHDNVGYTP 421 R+ +++FV LT+TN A +YGL KG IA G DADL IW+P+RE TI A LH V YTP Sbjct: 380 RISVNQFVALTSTNPAKLYGLHPRKGTIAIGADADLAIWDPQREVTIRNADLHHAVDYTP 439 Query: 422 YEGRQIRGWPEVVTSRGRVVVSEGELKVARGSGRFIARQCPAPA 465 YEG ++ GWP RG+VV EGE+ G G+F+ P A Sbjct: 440 YEGLRVTGWPVTTLVRGKVVAHEGEVLAEAGHGQFLPCGLPEMA 483