BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2821.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08404315.1| dihydrodipicolinate synthetase [Hylemonella g... 421 e-115 ref|YP_003410727.1| dihydrodipicolinate synthetase [Geodermatoph... 205 7e-51 ref|YP_003321724.1| dihydrodipicolinate synthetase [Sphaerobacte... 204 2e-50 ref|YP_824902.1| dihydrodipicolinate synthetase [Candidatus Soli... 201 1e-49 ref|YP_769993.1| dihydrodipicolinate synthase [Rhizobium legumin... 199 7e-49 >ref|ZP_08404315.1| dihydrodipicolinate synthetase [Hylemonella gracilis ATCC 19624] gb|EGI78512.1| dihydrodipicolinate synthetase [Hylemonella gracilis ATCC 19624] Length = 312 Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 226/298 (75%), Positives = 253/298 (84%) Query: 15 RGVYTICPTPFTADGALDLGSIATLVEFQIEAGVSGLAILGFLGEAHKLSNAERRAVTST 74 RGVYTICPTPF ADGALDL SIA+LV+FQIEAGV GLAILGFLGE+HKLS ER V Sbjct: 14 RGVYTICPTPFAADGALDLASIASLVDFQIEAGVHGLAILGFLGESHKLSQDERSQVIKA 73 Query: 75 FVKCAAGRVPVWVGVRALGLAGAIEQATEAAEAGAAAVFAAPLDMASDAVQFDYYKSLAA 134 ++ A GRVPVWVGVRALG+AGA+EQA EA GA AVF APLD +DAVQFDYY+++A Sbjct: 74 YIAQARGRVPVWVGVRALGIAGAVEQAREAERLGAQAVFVAPLDTTADAVQFDYYRTVAQ 133 Query: 135 ALSIPVVIHDFPDSFGTEIKAEVIARLGREGGVNFIKMEEPPVGQKISRIRDLAGESMRI 194 ++ IPVVIHDFPDSFGTEI A+++ARLGREGGV IKMEEPPVGQKISRI +LA SM++ Sbjct: 134 SVRIPVVIHDFPDSFGTEISADLVARLGREGGVGMIKMEEPPVGQKISRILELAQGSMKV 193 Query: 195 FGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIYDQFAAGDLAGAAATFDKYCPLIRYEF 254 FGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIY AAGDLA AAATFD+YCPLIRYEF Sbjct: 194 FGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIYAHHAAGDLAAAAATFDRYCPLIRYEF 253 Query: 255 QPKIGLSLRKYVYRKRGVISSDAIRSPGMRIDPETERELEAVIARVGLDLDQRGALAI 312 QPK+GL+LRK Y +RGVI+ DAIR+PGMR+DP T RELEA + RVGL LDQRG I Sbjct: 254 QPKVGLALRKTTYMRRGVIACDAIRAPGMRMDPLTARELEATVRRVGLSLDQRGPYVI 311 >ref|YP_003410727.1| dihydrodipicolinate synthetase [Geodermatophilus obscurus DSM 43160] gb|ADB76356.1| dihydrodipicolinate synthetase [Geodermatophilus obscurus DSM 43160] Length = 295 Score = 205 bits (522), Expect = 7e-51, Method: Composition-based stats. Identities = 132/290 (45%), Positives = 178/290 (61%), Gaps = 3/290 (1%) Query: 16 GVYTICPTPFTADGALDLGSIATLVEFQIEAGVSGLAILGFLGEAHKLSNAERRAVTSTF 75 GV I TPFT G +D GSI +LVE + AG GL ILG +GEA +L + ER V + Sbjct: 6 GVLPITLTPFTDGGDVDEGSIDSLVEDYLGAGAHGLTILGIMGEAARLLDDERERVLRRY 65 Query: 76 VKCAAGRVPVWVGVRALGLAGAIEQATEAAEAGAAAVFAAPLDMASDA-VQFDYYKSLAA 134 ++ AGRVPV GV A A++ A A +AGAAAV AP D + + F+++ +A Sbjct: 66 LQATAGRVPVVAGVSARATRMALDYARRAEDAGAAAVMLAPPDNTRNLDLVFEHFGLVAE 125 Query: 135 ALSIPVVIHDFPDSFGTEIKAEVIARLGRE-GGVNFIKMEEPPVGQKISRIRDLAGESMR 193 A+S+PVV+ D P + G + A + RL E G ++K+EE P KI+ +R A + Sbjct: 126 AVSVPVVVQDEPVNTGVVMPAPFLVRLLDEIEGCRYLKLEETPTLPKITAVRQKAKGPVG 185 Query: 194 IFGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIYDQFAAGDLAGAAATFDKYCPLIRYE 253 IFGGLGG+Y EEL RGA G MTGF FP++LV Y++F AGD AGA F +Y PLIRYE Sbjct: 186 IFGGLGGLYLYEELLRGADGIMTGFGFPQVLVGTYERFVAGDRAGAQEFFFRYLPLIRYE 245 Query: 254 FQPKI-GLSLRKYVYRKRGVISSDAIRSPGMRIDPETERELEAVIARVGL 302 Q + G+++RK V+ +RG I+S R P +D T EL+ +IA VGL Sbjct: 246 AQLGVGGVTIRKQVFARRGAIASPHARFPAPPVDELTLAELDDLIAAVGL 295 >ref|YP_003321724.1| dihydrodipicolinate synthetase [Sphaerobacter thermophilus DSM 20745] gb|ACZ40902.1| dihydrodipicolinate synthetase [Sphaerobacter thermophilus DSM 20745] Length = 302 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 125/291 (42%), Positives = 171/291 (58%), Gaps = 2/291 (0%) Query: 15 RGVYTICPTPFTADGALDLGSIATLVEFQIEAGVSGLAILGFLGEAHKLSNAERRAVTST 74 RGVY I TPF DGA+D S+ L E I GV G+ ILG GEA KL ERR + Sbjct: 5 RGVYNILSTPFRPDGAIDEASLRRLTEATIGMGVDGITILGVAGEAQKLLQEERRRLIEI 64 Query: 75 FVKCAAGRVPVWVGVRALGLAGAIEQATEAAEAGAAAVFAAPLDMASDAVQFD-YYKSLA 133 ++ AGRVP+ VG G I + EA AGAA V AP +Y+ +A Sbjct: 65 VMEVTAGRVPIIVGTSHDGTEATIAASREAQAAGAAGVMVAPPTFLQPGPALTRHYERVA 124 Query: 134 AALSIPVVIHDFPDSFGTEIKAEVIARLGRE-GGVNFIKMEEPPVGQKISRIRDLAGESM 192 AA+ IP+V+ DFP G + +A L R + IK+E+PP Q+ ++ L Sbjct: 125 AAIDIPIVLQDFPPVNGVTLSPRAMADLVRAVPAITTIKLEDPPTPQRTAQTLQLLEGRA 184 Query: 193 RIFGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIYDQFAAGDLAGAAATFDKYCPLIRY 252 I GGLGG+Y L+EL+RGA GTMTGFA+PEILVRI+ + +GD A A AT+ +Y PL+ + Sbjct: 185 TIVGGLGGMYMLDELRRGASGTMTGFAYPEILVRIWRAWESGDRAEAEATYYRYLPLLVF 244 Query: 253 EFQPKIGLSLRKYVYRKRGVISSDAIRSPGMRIDPETERELEAVIARVGLD 303 E QPK+G+++RK + R+RG+I +R PG R+D +LEA + + +D Sbjct: 245 EGQPKLGVAIRKEILRRRGLIDCAVLREPGPRLDDGIREDLEATLRALAID 295 >ref|YP_824902.1| dihydrodipicolinate synthetase [Candidatus Solibacter usitatus Ellin6076] gb|ABJ84617.1| dihydrodipicolinate synthetase [Candidatus Solibacter usitatus Ellin6076] Length = 300 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 125/288 (43%), Positives = 175/288 (60%), Gaps = 6/288 (2%) Query: 16 GVYTICPTPFTADGALDLGSIATLVEFQIEAGVSGLAILGFLGEAHKLSNAERRAVTSTF 75 GVY++ PTPFT G LDL S+ +V+ I AGV+GL LG E ++++ ER V T Sbjct: 5 GVYSVLPTPFTPAGDLDLESLKRVVDLFIGAGVNGLTALGVTSEVARMNDRERVQVLETV 64 Query: 76 VKCAAGRVPVWVGVRALGLAGAIEQATEAAEAGAAAVFAAPL---DMASDAVQFDYYKSL 132 VK GRV V G A G+ I+ A + GA AV +P + S++V ++ ++ Sbjct: 65 VKQVNGRVRVVAGATADGVRTCIDYTKFARDTGADAVMISPPRSPKLNSESV-VRHFAAV 123 Query: 133 AAALSIPVVIHDFPDSFGTEIKAEVIARLGRE-GGVNFIKMEEPPVGQKISRIRDLA-GE 190 AAA+ I +VI D+P G ++ ++ R+ RE IK+E+PP K SRIR+ A G Sbjct: 124 AAAVDIHIVIQDYPPISGFAMEPALLVRIAREVPAAQTIKLEDPPTPFKTSRIREAAQGM 183 Query: 191 SMRIFGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIYDQFAAGDLAGAAATFDKYCPLI 250 + IFGGLGGV+ LEEL GA G MTGFA+PEILV+I F +GDL AA F + PL+ Sbjct: 184 DIGIFGGLGGVFLLEELMAGATGAMTGFAYPEILVKIVKLFHSGDLDAAAEAFYPFVPLM 243 Query: 251 RYEFQPKIGLSLRKYVYRKRGVISSDAIRSPGMRIDPETERELEAVIA 298 R+EFQ +G+++RK V R+RG I+ IR PG ++D T L+ V+A Sbjct: 244 RFEFQEGLGMAIRKEVLRRRGAITCADIRLPGAKLDAATTTALDRVLA 291 >ref|YP_769993.1| dihydrodipicolinate synthase [Rhizobium leguminosarum bv. viciae 3841] emb|CAK09909.1| similar to dihydrodipicolinate synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 310 Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats. Identities = 133/303 (43%), Positives = 179/303 (59%), Gaps = 7/303 (2%) Query: 14 ARGVYTICPTPFTADGALDLGSIATLVEFQIEAGVSGLAILGFLGEAHKLSNAERRAVTS 73 A+GVY I TPFT DGALDL SI ++V+F AGV+GL +LG LGEA KL+ E R V Sbjct: 8 AKGVYVIAVTPFTDDGALDLASIDSMVDFYEGAGVTGLTVLGQLGEAPKLTAEESRTVVE 67 Query: 74 TFVKCAAGRVPVWVGVRALGLAGAIEQATEAAEAGAAAVFAAP-LDMASDAVQFDYYKSL 132 +K GR+PV VGV A GLA E A + GAA V AP + +D F +Y+S+ Sbjct: 68 RVLKRLDGRLPVVVGVSAPGLAPMSELAEAVMDQGAAGVMVAPPWTVKTDDQAFAFYQSV 127 Query: 133 AAAL-SIPVVIHDFPDSFGTEIKAEVIARLGRE-GGVNFIKMEEPPVGQKISRIRDLAGE 190 AL + P V+ D+P + I +VI R+ E +K E+ P KIS +R + + Sbjct: 128 GEALGNTPFVLQDYPLTTNVTIAPKVIERIVNEVPNCVMLKHEDWPGLSKISALRAASDK 187 Query: 191 -SMR---IFGGLGGVYFLEELQRGAVGTMTGFAFPEILVRIYDQFAAGDLAGAAATFDKY 246 +MR I G GG++ EE+ RGA G MTGF +PE++V + D +AAG+ A A FD Y Sbjct: 188 GTMRRISILCGNGGLFLPEEMGRGADGAMTGFCYPEMMVGVVDAYAAGNPDRAHAIFDAY 247 Query: 247 CPLIRYEFQPKIGLSLRKYVYRKRGVISSDAIRSPGMRIDPETERELEAVIARVGLDLDQ 306 PL RYE Q IGL+ RKYV KRGVI S +R PG ++ ++E ++AR + L + Sbjct: 248 LPLARYEQQQGIGLASRKYVLAKRGVIKSATLRKPGAKLSALDIADVERLLARQTIRLKE 307 Query: 307 RGA 309 GA Sbjct: 308 IGA 310