BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2815.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02360372.1| hcp protein [Burkholderia oklahomensis EO147]...   163   8e-39
ref|YP_004417503.1| hypothetical protein PT7_2339 [Pusillimonas ...   163   9e-39
ref|YP_001631058.1| hypothetical protein Bpet2448 [Bordetella pe...   162   2e-38
ref|YP_439065.1| hcp protein [Burkholderia thailandensis E264] >...   161   3e-38
ref|ZP_02466808.1| hcp protein [Burkholderia thailandensis MSMB43]    150   6e-35

>ref|ZP_02360372.1| hcp protein [Burkholderia oklahomensis EO147]
 ref|ZP_02366146.1| hcp protein [Burkholderia oklahomensis C6786]
          Length = 162

 Score =  163 bits (412), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 80/103 (77%), Positives = 89/103 (86%)

Query: 1   MTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNMRAWT 60
           MTLTKEIDKSSPKL QAL SGEQMK V LE+YRI  +G EE YYTVKL NAILT++R+WT
Sbjct: 59  MTLTKEIDKSSPKLSQALASGEQMKSVVLEFYRILKEGKEEHYYTVKLENAILTSIRSWT 118

Query: 61  PNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAPK 103
           PNCL   N+Q+GHMED+SFTYEKITWT+ PDGIEAEDSW APK
Sbjct: 119 PNCLVLDNKQLGHMEDVSFTYEKITWTYVPDGIEAEDSWRAPK 161


>ref|YP_004417503.1| hypothetical protein PT7_2339 [Pusillimonas sp. T7-7]
 gb|AEC20879.1| hypothetical protein PT7_2339 [Pusillimonas sp. T7-7]
          Length = 130

 Score =  163 bits (412), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 77/103 (74%), Positives = 87/103 (84%)

Query: 1   MTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNMRAWT 60
           +TLTKEIDKSSPKL+QAL SGEQMK V LE+YRISPKGTEEKYYT+ L  A++   R W 
Sbjct: 28  ITLTKEIDKSSPKLYQALCSGEQMKTVDLEFYRISPKGTEEKYYTIHLEKAVIVGTRLWV 87

Query: 61  PNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAPK 103
           PNCL P N+QMGHMED+  TYEKI WT++PDGIEAEDSWLAPK
Sbjct: 88  PNCLHPDNRQMGHMEDVGLTYEKIVWTWEPDGIEAEDSWLAPK 130


>ref|YP_001631058.1| hypothetical protein Bpet2448 [Bordetella petrii DSM 12804]
 emb|CAP42790.1| conserved hypothetical protein [Bordetella petrii]
          Length = 161

 Score =  162 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 74/103 (71%), Positives = 86/103 (83%)

Query: 1   MTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNMRAWT 60
           +TL KEIDKSSPKL+QAL SGEQ+K V LE+YRISPKGTEEKYYT+KL  A++     W 
Sbjct: 59  ITLVKEIDKSSPKLYQALCSGEQLKSVVLEFYRISPKGTEEKYYTIKLEKAVIVATHLWV 118

Query: 61  PNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAPK 103
           PNCL P N+Q+GHMEDI  TYEKI WT++PDGIE+EDSWLAPK
Sbjct: 119 PNCLQPDNRQLGHMEDIGMTYEKIVWTWEPDGIESEDSWLAPK 161


>ref|YP_439065.1| hcp protein [Burkholderia thailandensis E264]
 ref|ZP_02370359.1| hcp protein [Burkholderia thailandensis TXDOH]
 ref|ZP_02384268.1| hcp protein [Burkholderia thailandensis Bt4]
 ref|ZP_05590435.1| hcp protein [Burkholderia thailandensis E264]
 gb|ABC34439.1| hcp protein [Burkholderia thailandensis E264]
          Length = 162

 Score =  161 bits (407), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 80/103 (77%), Positives = 89/103 (86%)

Query: 1   MTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNMRAWT 60
           MTLTKEIDKSSPKL QAL SGEQMK V LE+YRI  +G EE YYTVKL NAILT++R+WT
Sbjct: 59  MTLTKEIDKSSPKLSQALASGEQMKSVVLEFYRILKEGKEEHYYTVKLENAILTSIRSWT 118

Query: 61  PNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAPK 103
           PNCL   N+Q+GHMED+SFTYEKITWT+ PDGIEAEDSW APK
Sbjct: 119 PNCLVLDNKQLGHMEDVSFTYEKITWTYVPDGIEAEDSWRAPK 161


>ref|ZP_02466808.1| hcp protein [Burkholderia thailandensis MSMB43]
          Length = 162

 Score =  150 bits (379), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 74/103 (71%), Positives = 84/103 (81%)

Query: 1   MTLTKEIDKSSPKLFQALTSGEQMKDVTLEYYRISPKGTEEKYYTVKLSNAILTNMRAWT 60
           M LTKEIDKSSPKL QALTSGE MK V LEY+RI+  G +E YYTVKL NAIL  +R+WT
Sbjct: 59  MMLTKEIDKSSPKLAQALTSGEHMKSVVLEYWRINKDGKQEHYYTVKLENAILMEIRSWT 118

Query: 61  PNCLTPTNQQMGHMEDISFTYEKITWTFDPDGIEAEDSWLAPK 103
           PNCL   N+++ HMED+SFTYEKITWT+  DGIEAEDSWL PK
Sbjct: 119 PNCLVLDNKELSHMEDVSFTYEKITWTYVLDGIEAEDSWLTPK 161