BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2814.p         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_754463.1| anti-sigma regulatory factor, serine/threonine ...   103   5e-20
emb|CAM77154.1| Stage II sporulation E [Magnetospirillum gryphis...   100   4e-19
ref|YP_003575872.1| serine-protein kinase [Prevotella ruminicola...    96   7e-18
ref|ZP_06367457.1| putative anti-sigma regulatory factor, serine...    92   1e-16
ref|YP_001212823.1| anti-sigma regulatory factor [Pelotomaculum ...    92   2e-16

>ref|YP_754463.1| anti-sigma regulatory factor, serine/threonine protein kinase
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
 gb|ABI69092.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 134

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 53/136 (38%), Positives = 84/136 (61%), Gaps = 7/136 (5%)

Query: 230 QLHNDVAELDRLAEAVDEFCAGCALPGKLAFELNLVLEEVVVNVINYAFPDGGADEPIHV 289
           +L N++ E+  LAEA++ +     +PGK  F+LNL L+E++ N I Y +P+GG  E I +
Sbjct: 4   RLKNELEEIRLLAEAIELWGEENGIPGKSLFQLNLALDELLTNTIIYGYPEGGEHE-IRL 62

Query: 290 RVVLETNSDEGRAVRVVAEVRDTGTAFDPLLGGPPDFVLDLDKRPVGGLGVHFLKTLMDE 349
           R+V E   +      ++ E+RD G AF+PL    PD   D+++RP+GGLG+H ++ ++DE
Sbjct: 63  RLVPEGEKE------LLIEIRDDGLAFNPLEVKAPDLKQDIEERPIGGLGIHLVRQMLDE 116

Query: 350 VSYRRTERHNCLWFAK 365
           + YRR    N L   K
Sbjct: 117 IEYRRENGQNVLLMKK 132


>emb|CAM77154.1| Stage II sporulation E [Magnetospirillum gryphiswaldense MSR-1]
          Length = 986

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/142 (38%), Positives = 82/142 (57%), Gaps = 9/142 (6%)

Query: 227 LLLQLHNDVAELDRLAEAVDEFCAGCALPGKLAFELNLVLEEVVVNVINYAFPDGGADEP 286
           L + + ND+ EL RLA  VDEF    ++P +++F LNL L+E++ N+++Y + DG   + 
Sbjct: 848 LEVTIANDLDELARLAGLVDEFVERNSMPERISFNLNLCLDELITNIVSYGYEDGHHHD- 906

Query: 287 IHVRVVLETNSDEGRAVRVVAEVRDTGTAFDPLLGGP-PDFVLDLDKRPVGGLGVHFLKT 345
           IHV+  L+         R++ E+ D G  ++P    P PD  LD+D RP+GGLGV  +K 
Sbjct: 907 IHVKFALDNG-------RLITEIIDDGKEYNPFTDAPEPDLALDVDDRPIGGLGVFLVKE 959

Query: 346 LMDEVSYRRTERHNCLWFAKHV 367
            MD   YRR    N +   K+V
Sbjct: 960 FMDRTDYRREGGTNIVTLEKNV 981


>ref|YP_003575872.1| serine-protein kinase [Prevotella ruminicola 23]
 gb|ADE83622.1| serine-protein kinase [Prevotella ruminicola 23]
          Length = 139

 Score = 96.3 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 9/137 (6%)

Query: 229 LQLHNDVAELDRLAEAVDEFCAGCALPGKLAFELNLVLEEVVVNVINYAFPDGGADEPIH 288
           L L NDV E+ +L   VDE C    L      ++NL +EE VVNV+NYA+P+G  D  I 
Sbjct: 7   LTLPNDVQEVPQLNAFVDEVCETAGLDMSTTMKINLAIEEAVVNVMNYAYPNGKGDVDID 66

Query: 289 VRVVLETNSDEGRAVRVVAEVRDTGTAFDPLLGGPPDFVLDLDKRPVGGLGVHFLKTLMD 348
            ++    N +  + V     + D+GT FDP +    D  L  ++R +GGLG+H ++ +MD
Sbjct: 67  AQI----NDEHLKFV-----ISDSGTPFDPTVKAEVDTTLSAEQRSIGGLGIHLIRQIMD 117

Query: 349 EVSYRRTERHNCLWFAK 365
            ++Y R +  N L  +K
Sbjct: 118 TINYERVDNKNLLTLSK 134


>ref|ZP_06367457.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Desulfovibrio sp. FW1012B]
 gb|EFC22165.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Desulfovibrio sp. FW1012B]
          Length = 138

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/139 (38%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 229 LQLHNDVAELDRLAEAVDEFCAGCALPGKLAFELNLVLEEVVVNVINYAFPDGGADEPIH 288
           L+LHN + ELDR+A+AV+ F     LP +L F++ L L+E++ N+I+Y +P+ G D  I 
Sbjct: 7   LRLHNRLLELDRVADAVEAFGEAHGLPARLRFQIRLALDELLTNIISYGYPEDG-DHLIT 65

Query: 289 VRVVLETNSDEGRAVRVVAEVRDTGTAFDPLLGGPPDFVLDLDKRPVGGLGVHFLKTLMD 348
           V +       EG  +R V E  D    FDPL    PD     ++R +GGLG+H ++T+MD
Sbjct: 66  VAM-----GQEGTRLRFVLE--DDAQPFDPLTARTPDTTGTPEERRIGGLGIHLVRTIMD 118

Query: 349 EVSYRRTERHNCLWFAKHV 367
            V+Y R +  N L   K +
Sbjct: 119 RVAYERVDDRNRLILEKDI 137


>ref|YP_001212823.1| anti-sigma regulatory factor [Pelotomaculum thermopropionicum SI]
 dbj|BAF60454.1| anti-sigma regulatory factor [Pelotomaculum thermopropionicum SI]
          Length = 147

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 8/143 (5%)

Query: 225 KELLLQLHNDVAELDRLAEAVDEFCAGCALPGKLAFELNLVLEEVVVNVINYAFPDGGAD 284
           +E  ++L N ++EL+RL+ A++EF     LP K   ++NL L+E+  N+++Y FPD   D
Sbjct: 12  EETRIELKNSLSELERLSLALEEFGDRRCLPLKTVMDVNLALDEIFTNIVSYGFPDSD-D 70

Query: 285 EPIHVRVVLETNSDEGRAVRVVAEVRDTGTAFDPLLGGPPDFVLDLDKRPVGGLGVHFLK 344
             I + +++     EG+ + +  E  D G  F+PL    PD  + L++R  GGLG++F++
Sbjct: 71  HLIKINLLI-----EGKELNITVE--DDGMPFNPLEIPEPDLNVPLEERKTGGLGIYFVR 123

Query: 345 TLMDEVSYRRTERHNCLWFAKHV 367
            ++DE+ Y R +  N L+  K +
Sbjct: 124 KMVDELRYERRQGKNVLFLKKKI 146