BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2797.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775998.1| L-lactate dehydrogenase [Herbaspirillum sero... 724 0.0 ref|YP_004753099.1| L-lactate dehydrogenase [Collimonas fungivor... 654 0.0 ref|ZP_08403812.1| cytochrome L-lactate dehydrogenase [Rubriviva... 537 e-150 ref|YP_001156149.1| L-lactate dehydrogenase (cytochrome) [Polynu... 535 e-150 ref|YP_001022018.1| L-lactate dehydrogenase (cytochrome) [Methyl... 533 e-149 >ref|YP_003775998.1| L-lactate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ64090.1| L-lactate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 724 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 369/379 (97%), Positives = 379/379 (100%) Query: 1 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRANTRDLAALKLRQRVAINVDERS 60 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRAN++DLAALKLRQRVAINVDERS Sbjct: 1 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRANSKDLAALKLRQRVAINVDERS 60 Query: 61 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 TR+TMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV Sbjct: 61 TRTTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 Query: 121 TTKPFWFQLYVMRDRGFVQSLIDRAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT 180 TTKPFWFQLYVMRDRGFV+SLI+RAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT Sbjct: 121 TTKPFWFQLYVMRDRGFVKSLIERAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT 180 Query: 181 LDTLLDLASKPGWALRALGGRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNWEDV 240 L+TLLDLASKPGWALRALGGRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNW+DV Sbjct: 181 LETLLDLASKPGWALRALGGRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNWDDV 240 Query: 241 AWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIAEAV 300 AWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIA+AV Sbjct: 241 AWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIAQAV 300 Query: 301 GDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGGDGVSQMLEIMRKELDV 360 GDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGG+GVSQMLEIMRKELDV Sbjct: 301 GDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGGEGVSQMLEIMRKELDV 360 Query: 361 SMALTGTKDIKDVGPQILV 379 SMALTGTKDIKDVGPQIL+ Sbjct: 361 SMALTGTKDIKDVGPQILI 379 >ref|YP_004753099.1| L-lactate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK62276.1| L-lactate dehydrogenase [Collimonas fungivorans Ter331] Length = 376 Score = 654 bits (1688), Expect = 0.0, Method: Composition-based stats. Identities = 331/378 (87%), Positives = 357/378 (94%), Gaps = 3/378 (0%) Query: 1 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRANTRDLAALKLRQRVAINVDERS 60 M V+TCVED RLLAKKRVPKAFYDYADSGSYTESTYRAN+ DLAA+ LRQRVAINVD+RS Sbjct: 1 MSVITCVEDLRLLAKKRVPKAFYDYADSGSYTESTYRANSSDLAAIHLRQRVAINVDQRS 60 Query: 61 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV Sbjct: 61 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 Query: 121 TTKPFWFQLYVMRDRGFVQSLIDRAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT 180 TTKPFWFQLYVMRDRGF++SLI+RAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPK+T Sbjct: 121 TTKPFWFQLYVMRDRGFIKSLIERAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKMT 180 Query: 181 LDTLLDLASKPGWALRALGGRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNWEDV 240 L LLDLA+KPGWALRALGGRK+FGNLAGH+ GA G+ TLSKWTASQFDPTL W+D+ Sbjct: 181 LANLLDLATKPGWALRALGGRKSFGNLAGHV---SGADGIMTLSKWTASQFDPTLCWDDI 237 Query: 241 AWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIAEAV 300 AWIK+QWGGKLILKGILDVEDAK+A +GADAIVVSNHGGRQLDGA+SSI ALPAI EAV Sbjct: 238 AWIKEQWGGKLILKGILDVEDAKIAATTGADAIVVSNHGGRQLDGAVSSISALPAIVEAV 297 Query: 301 GDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGGDGVSQMLEIMRKELDV 360 GDQ+EVWFDGGIRSGQDVLKAVALGA+GTMIGRAFLYSLGAMG GV++ML+I+++ELDV Sbjct: 298 GDQVEVWFDGGIRSGQDVLKAVALGAKGTMIGRAFLYSLGAMGEAGVTRMLQILQQELDV 357 Query: 361 SMALTGTKDIKDVGPQIL 378 SMALTGTKDIKD GP IL Sbjct: 358 SMALTGTKDIKDAGPHIL 375 >ref|ZP_08403812.1| cytochrome L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] gb|EGJ12145.1| cytochrome L-lactate dehydrogenase [Rubrivivax benzoatilyticus JA2] Length = 383 Score = 537 bits (1383), Expect = e-150, Method: Composition-based stats. Identities = 275/380 (72%), Positives = 313/380 (82%), Gaps = 4/380 (1%) Query: 1 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRANTRDLAALKLRQRVAINVDERS 60 MPV+T +ED R+LAKKRVP+ FYDYADSGS+TESTYRAN D A+KLRQRVA++++ RS Sbjct: 1 MPVITHIEDLRVLAKKRVPRMFYDYADSGSWTESTYRANEHDFQAIKLRQRVAVDMEGRS 60 Query: 61 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 T STM+G V MPVAIAPTGLTGMQ A+GE+L A AAE+FGIPFTLSTMSICSIEDVA+ Sbjct: 61 TASTMVGVPVAMPVAIAPTGLTGMQHADGEILAARAAERFGIPFTLSTMSICSIEDVAAH 120 Query: 121 TTKPFWFQLYVMRDRGFVQSLIDRAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT 180 T PFWFQLYVMRDR F++ LIDRAKAA C ALVLTLDLQILGQRHKDLKNG+S PPKLT Sbjct: 121 TKAPFWFQLYVMRDRDFIERLIDRAKAAGCGALVLTLDLQILGQRHKDLKNGLSAPPKLT 180 Query: 181 LDTLLDLASKPGWALRALG-GRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNWED 239 L LL+LA+KP W L LG R+ FGN+ GH++ G + +L WTA QFDP LNW D Sbjct: 181 LPNLLNLATKPRWCLGMLGTKRRGFGNIVGHVR---GVADMSSLGAWTAQQFDPRLNWND 237 Query: 240 VAWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIAEA 299 V WIK++WGGKLILKGI DVEDA+LAV+SGADA+VVSNHGGRQLDGA SSI ALPAI Sbjct: 238 VEWIKKRWGGKLILKGIQDVEDARLAVESGADALVVSNHGGRQLDGAESSIRALPAITAE 297 Query: 300 VGDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGGDGVSQMLEIMRKELD 359 VG +IEV DGGIRSGQDVLKAVALGARGT IGRAFLY LGAMG GV++ LEI+ KELD Sbjct: 298 VGSRIEVHMDGGIRSGQDVLKAVALGARGTYIGRAFLYGLGAMGEAGVTKALEIIHKELD 357 Query: 360 VSMALTGTKDIKDVGPQILV 379 ++MA G K I DVGP IL+ Sbjct: 358 LTMAFCGRKRIADVGPDILL 377 >ref|YP_001156149.1| L-lactate dehydrogenase (cytochrome) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP34585.1| L-lactate dehydrogenase (cytochrome) [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 381 Score = 535 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 261/379 (68%), Positives = 312/379 (82%), Gaps = 4/379 (1%) Query: 1 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRANTRDLAALKLRQRVAINVDERS 60 MP++T +ED R+L KKR PK FYDYADSGS+TESTYRAN D +KLRQRVA+N+ R+ Sbjct: 1 MPIITNIEDLRVLHKKRTPKMFYDYADSGSWTESTYRANESDFQKIKLRQRVAVNMTNRT 60 Query: 61 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 T++TM+G +V MPVA+APTGLTGMQ A+GE+L A AAEKFG+PF LSTMSICSIEDVA Sbjct: 61 TKTTMVGQEVAMPVALAPTGLTGMQHADGEILAAKAAEKFGVPFCLSTMSICSIEDVAEQ 120 Query: 121 TTKPFWFQLYVMRDRGFVQSLIDRAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT 180 TTKPFWFQLYVM+DRGF++ LI+RAKAAKCSALVLTLDLQILGQRHKDLKNG+S PPKLT Sbjct: 121 TTKPFWFQLYVMKDRGFIERLIERAKAAKCSALVLTLDLQILGQRHKDLKNGLSAPPKLT 180 Query: 181 LDTLLDLASKPGWAL-RALGGRKTFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNWED 239 + ++++A+KP W L A+ R+TF N+ GH G G + +LS WTA QFDP LNW D Sbjct: 181 IANMINMATKPRWCLGMAMTPRRTFRNIVGH---ATGVGNMSSLSSWTAEQFDPGLNWGD 237 Query: 240 VAWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIAEA 299 V WIK+ WGGKLI+KGILD +DA+LA SGADA++VSNHGGRQLDGA+SSI+ALP I A Sbjct: 238 VEWIKKLWGGKLIIKGILDEDDARLAANSGADALIVSNHGGRQLDGAVSSIQALPGIVNA 297 Query: 300 VGDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGGDGVSQMLEIMRKELD 359 VG+ IEVW DGGIRSGQDVLKA ALGARGTMIGR FLY LGAMG GV++ LE++ ELD Sbjct: 298 VGNDIEVWMDGGIRSGQDVLKAWALGARGTMIGRPFLYGLGAMGEAGVTKCLELIHNELD 357 Query: 360 VSMALTGTKDIKDVGPQIL 378 ++MA TG +DI++V IL Sbjct: 358 ITMAFTGHRDIQNVTKDIL 376 >ref|YP_001022018.1| L-lactate dehydrogenase (cytochrome) [Methylibium petroleiphilum PM1] gb|ABM95783.1| L-lactate dehydrogenase (cytochrome) [Methylibium petroleiphilum PM1] Length = 388 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 270/380 (71%), Positives = 314/380 (82%), Gaps = 4/380 (1%) Query: 1 MPVMTCVEDFRLLAKKRVPKAFYDYADSGSYTESTYRANTRDLAALKLRQRVAINVDERS 60 MPV+TC+ED R+LA++RVP+ FYDYADSGS+TE TYRAN D A + LRQRVA+N++ RS Sbjct: 1 MPVITCIEDLRVLARRRVPRMFYDYADSGSWTEGTYRANETDFARILLRQRVAVNMEGRS 60 Query: 61 TRSTMIGHDVTMPVAIAPTGLTGMQWANGEMLGAIAAEKFGIPFTLSTMSICSIEDVASV 120 R+T+ G D MPV IAPTGLTGMQ A+GE+LGA AAE FG+PFTLSTMSICSIED+A+ Sbjct: 61 LRTTLAGQDCAMPVVIAPTGLTGMQHADGEILGARAAEAFGVPFTLSTMSICSIEDIAAH 120 Query: 121 TTKPFWFQLYVMRDRGFVQSLIDRAKAAKCSALVLTLDLQILGQRHKDLKNGMSVPPKLT 180 T PFWFQLY MRDR F++ LI+RAKAA+CSALVLTLDLQ+LGQRHKDLKNGM+ PPK T Sbjct: 121 TKAPFWFQLYWMRDRDFMERLIERAKAARCSALVLTLDLQVLGQRHKDLKNGMTAPPKPT 180 Query: 181 LDTLLDLASKPGWALRALGGRK-TFGNLAGHIKGGEGAGGVQTLSKWTASQFDPTLNWED 239 L L++LA KP W L G R+ +FGNL GH K G + +L WT QFDP L+W+D Sbjct: 181 LANLINLAMKPRWCLGMAGTRRHSFGNLVGHAK---GVSDMSSLGTWTKEQFDPRLSWDD 237 Query: 240 VAWIKQQWGGKLILKGILDVEDAKLAVQSGADAIVVSNHGGRQLDGAMSSIEALPAIAEA 299 VAWIKQ+WGG+LILKGI++V DAKLA SGADAIVVSNHGGRQLDGA SSI ALPAIAEA Sbjct: 238 VAWIKQRWGGRLILKGIMEVADAKLAADSGADAIVVSNHGGRQLDGAPSSIAALPAIAEA 297 Query: 300 VGDQIEVWFDGGIRSGQDVLKAVALGARGTMIGRAFLYSLGAMGGDGVSQMLEIMRKELD 359 VGD+IEVW DGGIRSGQDVLKAVALGARGTMIGRAFLY LGAMG GV++ LEI+R ELD Sbjct: 298 VGDRIEVWMDGGIRSGQDVLKAVALGARGTMIGRAFLYGLGAMGQAGVTRALEIIRNELD 357 Query: 360 VSMALTGTKDIKDVGPQILV 379 ++MA TG DI+ VG +ILV Sbjct: 358 ITMAFTGHTDIRRVGREILV 377