BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2789.p (326 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776006.1| aminodeoxychorismate lyase [Herbaspirillum s... 603 e-170 ref|YP_004752473.1| hypothetical protein CFU_1818 [Collimonas fu... 447 e-124 ref|ZP_08275260.1| YceG like protein [Oxalobacteraceae bacterium... 434 e-119 ref|YP_001353677.1| hypothetical protein mma_1987 [Janthinobacte... 426 e-117 ref|YP_001099694.1| putative signal peptide [Herminiimonas arsen... 423 e-116 >ref|YP_003776006.1| aminodeoxychorismate lyase [Herbaspirillum seropedicae SmR1] gb|ADJ64098.1| aminodeoxychorismate lyase protein [Herbaspirillum seropedicae SmR1] Length = 326 Score = 603 bits (1555), Expect = e-170, Method: Composition-based stats. Identities = 318/326 (97%), Positives = 322/326 (98%) Query: 1 MKKLFVTLLVLAALVAGAGVYWSKQPIVEPNGQVIAFTITPGAGVNGAAQQIAAAGVPVN 60 MKKLFVTLLVLAALVAGAGVYWSKQPIV+P+GQVIAFTITPGAGVNGAAQQIAAAGVPVN Sbjct: 1 MKKLFVTLLVLAALVAGAGVYWSKQPIVDPSGQVIAFTITPGAGVNGAAQQIAAAGVPVN 60 Query: 61 PDLFALYARLSGEGGRIKAGSYEIKPGYTPQRLLLQLVRGEFAQEALTVIEGWTFKQMRK 120 PDLFALYARLSGEG RIKAGSYEIKPGYTPQRLL QLVRGEFAQEALTVIEGWTFKQMRK Sbjct: 61 PDLFALYARLSGEGARIKAGSYEIKPGYTPQRLLQQLVRGEFAQEALTVIEGWTFKQMRK 120 Query: 121 AIADQPALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMS 180 AIA+QPALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMS Sbjct: 121 AIAEQPALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMS 180 Query: 181 KKLNEAWARRDLSLPYRTPYEALTMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDP 240 KKLNEAW RRDLSLPYRTPYEAL MASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDP Sbjct: 181 KKLNEAWTRRDLSLPYRTPYEALIMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDP 240 Query: 241 TVIYGMGDRYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYF 300 TVIYGMG+RYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYF Sbjct: 241 TVIYGMGERYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYF 300 Query: 301 VARGDGTSHFSSNLNEHNQAVNRYQR 326 VARGDGTSHFSSNLNEHNQAVNRYQR Sbjct: 301 VARGDGTSHFSSNLNEHNQAVNRYQR 326 >ref|YP_004752473.1| hypothetical protein CFU_1818 [Collimonas fungivorans Ter331] gb|AEK61650.1| hypothetical protein CFU_1818 [Collimonas fungivorans Ter331] Length = 344 Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats. Identities = 222/325 (68%), Positives = 272/325 (83%), Gaps = 1/325 (0%) Query: 2 KKLFVTLLVLAALVAGAGVYWSKQPIVEPNGQVIAFTITPGAGVNGAAQQIAAAGVPVNP 61 KKL +++++L AG YW++QPI E +G V FTI PG+ + +AQQI AGV VNP Sbjct: 21 KKLLLSVILLGGAAAGGVAYWAQQPIFE-DGPVRPFTIKPGSTLASSAQQIDEAGVGVNP 79 Query: 62 DLFALYARLSGEGGRIKAGSYEIKPGYTPQRLLLQLVRGEFAQEALTVIEGWTFKQMRKA 121 L L AR++ +G ++KAGSYE+KPG TP RLL QLVRGEFAQE+LTVIEGWTF+QMR+A Sbjct: 80 QLLELLARVTDKGSKLKAGSYELKPGATPLRLLTQLVRGEFAQESLTVIEGWTFRQMRQA 139 Query: 122 IADQPALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMSK 181 +A QPALKHDTA +D ++LAK+T +Y PEGLFFPDTYLFAKG+SD+QVYKQA +L+ K Sbjct: 140 VAAQPALKHDTAALSDAELLAKITPDYAMPEGLFFPDTYLFAKGSSDLQVYKQAHSLLIK 199 Query: 182 KLNEAWARRDLSLPYRTPYEALTMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDPT 241 +L + W RD SLPY+TPYEAL MASIVEKETG++++R +AGVF+NRL+ GMLLQTDPT Sbjct: 200 RLTQGWEGRDTSLPYKTPYEALIMASIVEKETGKRADRSTIAGVFINRLKIGMLLQTDPT 259 Query: 242 VIYGMGDRYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYFV 301 VIYGMGD+YQG IRK DL TDTPYNTYTRAGLPPTPIALPGA S++AA++P +T+ALYFV Sbjct: 260 VIYGMGDQYQGAIRKRDLTTDTPYNTYTRAGLPPTPIALPGAESISAAMHPAQTDALYFV 319 Query: 302 ARGDGTSHFSSNLNEHNQAVNRYQR 326 ARGDG+SHFS+NL EHNQAVN+YQR Sbjct: 320 ARGDGSSHFSNNLGEHNQAVNQYQR 344 >ref|ZP_08275260.1| YceG like protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31266.1| YceG like protein [Oxalobacteraceae bacterium IMCC9480] Length = 329 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 214/326 (65%), Positives = 265/326 (81%) Query: 1 MKKLFVTLLVLAALVAGAGVYWSKQPIVEPNGQVIAFTITPGAGVNGAAQQIAAAGVPVN 60 +K LF ++ A VAG G +W+ QPI+ P + F I PG+G+ A+QIA+ + + Sbjct: 4 LKTLFWLFVLAALGVAGGGAHWASQPILAPGQPAVDFAIAPGSGLRSVAEQIASQHIALQ 63 Query: 61 PDLFALYARLSGEGGRIKAGSYEIKPGYTPQRLLLQLVRGEFAQEALTVIEGWTFKQMRK 120 P LF RL+G+ G+IKAG Y +KPG TPQRL+ QLVRGEFAQEAL +IEGWTF+QMR+ Sbjct: 64 PLLFEALVRLTGKDGQIKAGHYALKPGTTPQRLVGQLVRGEFAQEALVIIEGWTFRQMRE 123 Query: 121 AIADQPALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMS 180 A+A PALKHDT +D+++LAK++ +Y PEGLFFPDTYLFAKGASD+QVY+QA A M Sbjct: 124 AVAASPALKHDTVALSDKELLAKVSTDYAVPEGLFFPDTYLFAKGASDLQVYRQAHAAML 183 Query: 181 KKLNEAWARRDLSLPYRTPYEALTMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDP 240 K+L +AW +RDLSLPY+ PYEALTMASI+EKETGQK+ERGM+AGVFVNRL+ GMLLQTDP Sbjct: 184 KRLQQAWEQRDLSLPYKNPYEALTMASIIEKETGQKTERGMIAGVFVNRLKIGMLLQTDP 243 Query: 241 TVIYGMGDRYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYF 300 TVIYGMGD++QG IRK DLLTDTP+NTY R GLPP+PI+LPG +L AAL P++T+ALYF Sbjct: 244 TVIYGMGDKFQGNIRKRDLLTDTPFNTYLRVGLPPSPISLPGNDALNAALRPERTDALYF 303 Query: 301 VARGDGTSHFSSNLNEHNQAVNRYQR 326 VARGDG+S FSSNL +HN+AVNRYQR Sbjct: 304 VARGDGSSVFSSNLPDHNRAVNRYQR 329 >ref|YP_001353677.1| hypothetical protein mma_1987 [Janthinobacterium sp. Marseille] gb|ABR89583.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 329 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 207/328 (63%), Positives = 264/328 (80%), Gaps = 3/328 (0%) Query: 1 MKKLFVTLLVLAALVAGAGVYWSKQPIVEPNGQV--IAFTITPGAGVNGAAQQIAAAGVP 58 MKKLF +++L + + ++W++QPI+ P Q + FTI G+G+ + QQI AAGVP Sbjct: 1 MKKLFRRIILLGIIAGASFMFWAEQPIL-PAEQTSGVEFTIAAGSGLRSSMQQIDAAGVP 59 Query: 59 VNPDLFALYARLSGEGGRIKAGSYEIKPGYTPQRLLLQLVRGEFAQEALTVIEGWTFKQM 118 NP L + A+++G ++KAG+YE+KPG TP L+ QLVRGEF QEALT+IEGW F+QM Sbjct: 60 ANPWLMTVLAQITGNSTKLKAGTYELKPGTTPNGLIKQLVRGEFVQEALTIIEGWNFRQM 119 Query: 119 RKAIADQPALKHDTATWTDQQILAKLTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFAL 178 R+AI P L+HDTA +D+ ++AK++ ++ PEGLF+PDTYLFAK +SD+Q+YKQA +L Sbjct: 120 RQAIDGHPGLRHDTAGLSDKDLMAKVSTDFPLPEGLFYPDTYLFAKNSSDLQIYKQAHSL 179 Query: 179 MSKKLNEAWARRDLSLPYRTPYEALTMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQT 238 M K+LNEAW R+ +LPY TPYEAL MASIVEKETG+KSERGM+AGVFVNRLR GMLLQT Sbjct: 180 MIKRLNEAWLARNDNLPYATPYEALIMASIVEKETGKKSERGMIAGVFVNRLRQGMLLQT 239 Query: 239 DPTVIYGMGDRYQGKIRKVDLLTDTPYNTYTRAGLPPTPIALPGAASLAAALNPDKTEAL 298 DPTVIYGMG++++G IRK DL TDTP+NTYTR GLPPTPIALPGA SL AA+NP KT+A+ Sbjct: 240 DPTVIYGMGEQFKGNIRKRDLQTDTPHNTYTRLGLPPTPIALPGAESLHAAMNPAKTDAV 299 Query: 299 YFVARGDGTSHFSSNLNEHNQAVNRYQR 326 YFVARGDG+S FS+ L+EHN AVN+YQR Sbjct: 300 YFVARGDGSSQFSATLDEHNNAVNKYQR 327 >ref|YP_001099694.1| putative signal peptide [Herminiimonas arsenicoxydans] emb|CAL61567.1| putative Aminodeoxychorismate lyase [Herminiimonas arsenicoxydans] Length = 328 Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats. Identities = 205/303 (67%), Positives = 248/303 (81%) Query: 24 KQPIVEPNGQVIAFTITPGAGVNGAAQQIAAAGVPVNPDLFALYARLSGEGGRIKAGSYE 83 +QPI + I FTI PG+GV + QQI AG PV P L + A+++G ++KAGSYE Sbjct: 25 QQPITRNDQPAIDFTINPGSGVKSSMQQIENAGAPVQPFLMMVLAQVTGNSTKLKAGSYE 84 Query: 84 IKPGYTPQRLLLQLVRGEFAQEALTVIEGWTFKQMRKAIADQPALKHDTATWTDQQILAK 143 +KPG TP RLL QLVRGEFAQEALTVIEGWTF+QMR+ I PAL+HDTA +DQ ++A+ Sbjct: 85 LKPGTTPSRLLTQLVRGEFAQEALTVIEGWTFRQMREVINANPALRHDTAGLSDQDLMAR 144 Query: 144 LTNEYTYPEGLFFPDTYLFAKGASDMQVYKQAFALMSKKLNEAWARRDLSLPYRTPYEAL 203 ++++Y PEGLF+PDTYLFAK +SD+Q+YKQA LM K+LNEAW R+ SLPY +PYEAL Sbjct: 145 ISSDYKTPEGLFYPDTYLFAKNSSDLQIYKQAHNLMLKRLNEAWLARNPSLPYASPYEAL 204 Query: 204 TMASIVEKETGQKSERGMVAGVFVNRLRTGMLLQTDPTVIYGMGDRYQGKIRKVDLLTDT 263 MASIVEKETG+KSER M+AGVFVNRL+ GMLLQTDPTVIYGMGD Y+G IRK DLLTDT Sbjct: 205 IMASIVEKETGKKSERTMIAGVFVNRLKKGMLLQTDPTVIYGMGDSYKGNIRKSDLLTDT 264 Query: 264 PYNTYTRAGLPPTPIALPGAASLAAALNPDKTEALYFVARGDGTSHFSSNLNEHNQAVNR 323 P+NTYTR+GLPPTPIALPG SL AA+NP T+A+YFVARGDG+S FS+NL++HN AVN+ Sbjct: 265 PHNTYTRSGLPPTPIALPGMESLHAAMNPAATDAVYFVARGDGSSQFSANLDDHNNAVNK 324 Query: 324 YQR 326 YQR Sbjct: 325 YQR 327